FFCP PHASE1:Hg19::chr2:109605635..109605649,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:109605635..109605649,-
|short_description=p3@EDAR
|description=CAGE_peak_3_at_EDAR_5end
|association_with_transcript=75bp_to_ENST00000409271_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10913 | |EntrezGene=10913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2895 | |HGNC=2895 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC98 | |UniProt=E9PC98 | ||
|association_with_transcript=75bp_to_ENST00000409271_5end | |||
|cluster_id=chr2:109605635..109605649,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_3_at_EDAR_5end | |||
|id=chr2:109605635..109605649,- | |||
|ontology_enrichment_celltype=CL:0002231!7.12e-10!3;CL:0002076!4.44e-09!43;CL:0000223!2.82e-08!59;CL:0002251!3.92e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.04e-10;3!CL:0000083;1.82e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,9.90e-11,3;CL:0000083,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.73e-29;1 | |||
|ontology_enrichment_disease=DOID:1749!1.01e-13!14;DOID:4929!1.24e-07!2;DOID:3119!1.74e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.73e-29;1!DOID:3149;2.73e-29;1!DOID:4929;1.33e-15;2!DOID:3451;2.21e-15;2!DOID:4159;2.21e-15;2!DOID:0060122;2.21e-15;2!DOID:1749;4.12e-09;14!DOID:1793;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.20e-29,1;DOID:3149,4.20e-29,1;DOID:4929,1.33e-15,2;DOID:3451,2.74e-15,2;DOID:4159,2.74e-15,2;DOID:0060122,2.74e-15,2;DOID:1749,4.21e-09,14;DOID:1793,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000344!5.24e-12!12;UBERON:0004119!1.28e-11!169;UBERON:0000925!1.28e-11!169;UBERON:0006595!1.28e-11!169;UBERON:0001007!2.07e-11!155;UBERON:0001555!2.07e-11!155;UBERON:0007026!2.07e-11!155;UBERON:0000974!1.28e-10!10;UBERON:0000161!3.51e-10!35;UBERON:0004921!1.38e-09!129;UBERON:0004185!1.38e-09!129;UBERON:0005409!2.17e-08!35;UBERON:0000077!6.37e-08!130;UBERON:0003343!1.13e-07!4;UBERON:0004785!1.13e-07!4;UBERON:0000160!1.27e-07!27;UBERON:0001255!3.14e-07!2;UBERON:0001556!3.14e-07!2;UBERON:0001046!3.37e-07!19;UBERON:0000341!6.20e-07!2;UBERON:0003127!6.79e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.04e-10;3!UBERON:0000014;2.35e-08;4!UBERON:0002075;2.81e-07;18!UBERON:0000945;6.21e-07;5!UBERON:0010039;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,8.99e-11,3;UBERON:0006242,8.99e-11,3;UBERON:0000014,2.61e-08,4;UBERON:0002075,2.68e-07,18 | |||
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| ||
|short_description=p3@EDAR | |||
}} | }} |
Latest revision as of 07:02, 16 September 2015
Short description: | p3@EDAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EDAR_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 75bp_to_ENST00000409271_5end |
EntrezGene: | EDAR |
HGNC: | 2895 |
UniProt: | E9PC98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 9.90e-11 | 3 |
epithelial cell of pancreas | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 8.99e-11 | 3 |
gall bladder primordium | 8.99e-11 | 3 |
zone of skin | 2.61e-08 | 4 |
viscus | 2.68e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.20e-29 | 1 |
keratoacanthoma | 4.20e-29 | 1 |
tubular adenocarcinoma | 1.33e-15 | 2 |
skin carcinoma | 2.74e-15 | 2 |
skin cancer | 2.74e-15 | 2 |
integumentary system cancer | 2.74e-15 | 2 |
squamous cell carcinoma | 4.21e-09 | 14 |
pancreatic cancer | 1.82e-08 | 4 |