FFCP PHASE1:Mm9::chr3:121517837..121517869,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19299 | |EntrezGene=19299 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=685 | |MCL_coexpression_id=685 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENSMUST00000162262_5end | |association_with_transcript=-10bp_to_ENSMUST00000162262_5end | ||
|cluster_id=chr3:121517837..121517869,- | |||
|description=CAGE_peak_6_at_Abcd3_5end | |description=CAGE_peak_6_at_Abcd3_5end | ||
|id=chr3:121517837..121517869,- | |id=chr3:121517837..121517869,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.01e-08!23;UBERON:0009856!1.01e-08!23;UBERON:0003914!1.37e-08!47;UBERON:0002107!2.36e-08!22;UBERON:0007499!2.36e-08!22;UBERON:0006925!2.36e-08!22;UBERON:0009497!2.36e-08!22;UBERON:0000015!2.36e-08!22;UBERON:0002423!2.36e-08!22;UBERON:0006235!2.36e-08!22;UBERON:0008835!2.36e-08!22;UBERON:0003894!2.36e-08!22;UBERON:0004161!2.36e-08!22;UBERON:0008836!2.36e-08!22;UBERON:0002365!5.75e-08!25;UBERON:0002330!5.75e-08!25;UBERON:0004111!3.90e-07!122;UBERON:0000025!4.65e-07!114 | |ontology_enrichment_uberon=UBERON:0009854!1.01e-08!23;UBERON:0009856!1.01e-08!23;UBERON:0003914!1.37e-08!47;UBERON:0002107!2.36e-08!22;UBERON:0007499!2.36e-08!22;UBERON:0006925!2.36e-08!22;UBERON:0009497!2.36e-08!22;UBERON:0000015!2.36e-08!22;UBERON:0002423!2.36e-08!22;UBERON:0006235!2.36e-08!22;UBERON:0008835!2.36e-08!22;UBERON:0003894!2.36e-08!22;UBERON:0004161!2.36e-08!22;UBERON:0008836!2.36e-08!22;UBERON:0002365!5.75e-08!25;UBERON:0002330!5.75e-08!25;UBERON:0004111!3.90e-07!122;UBERON:0000025!4.65e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.61e-11,23;UBERON:0009856,3.61e-11,23;UBERON:0002107,1.23e-10,22;UBERON:0007499,1.23e-10,22;UBERON:0006925,1.23e-10,22;UBERON:0009497,1.23e-10,22;UBERON:0000015,1.23e-10,22;UBERON:0002423,1.23e-10,22;UBERON:0006235,1.23e-10,22;UBERON:0008835,1.23e-10,22;UBERON:0003894,1.23e-10,22;UBERON:0004161,1.23e-10,22;UBERON:0008836,1.23e-10,22;UBERON:0002365,1.31e-09,25;UBERON:0002330,1.31e-09,25;UBERON:0003914,1.63e-08,47;UBERON:0000160,1.65e-08,31;UBERON:0001007,8.54e-08,116;UBERON:0001555,8.54e-08,116;UBERON:0007026,8.54e-08,116;UBERON:0004119,2.11e-07,118;UBERON:0000925,2.11e-07,118;UBERON:0006595,2.11e-07,118;UBERON:0000344,3.27e-07,15;UBERON:0004921,3.86e-07,114 | |||
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| ||
|short_description=p6@Abcd3 | |short_description=p6@Abcd3 | ||
}} | }} |
Latest revision as of 12:58, 1 October 2015
Short description: | p6@Abcd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Abcd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:685 |
Association with transcript: | -10bp_to_ENSMUST00000162262_5end |
EntrezGene: | Abcd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 3.61e-11 | 23 |
sac | 3.61e-11 | 23 |
liver | 1.23e-10 | 22 |
epithelial sac | 1.23e-10 | 22 |
digestive gland | 1.23e-10 | 22 |
epithelium of foregut-midgut junction | 1.23e-10 | 22 |
anatomical boundary | 1.23e-10 | 22 |
hepatobiliary system | 1.23e-10 | 22 |
foregut-midgut junction | 1.23e-10 | 22 |
hepatic diverticulum | 1.23e-10 | 22 |
liver primordium | 1.23e-10 | 22 |
septum transversum | 1.23e-10 | 22 |
liver bud | 1.23e-10 | 22 |
exocrine gland | 1.31e-09 | 25 |
exocrine system | 1.31e-09 | 25 |
epithelial tube | 1.63e-08 | 47 |
intestine | 1.65e-08 | 31 |
digestive system | 8.54e-08 | 116 |
digestive tract | 8.54e-08 | 116 |
primitive gut | 8.54e-08 | 116 |
endoderm-derived structure | 2.11e-07 | 118 |
endoderm | 2.11e-07 | 118 |
presumptive endoderm | 2.11e-07 | 118 |
mucosa | 3.27e-07 | 15 |
subdivision of digestive tract | 3.86e-07 | 114 |