FFCP PHASE1:Mm9::chr13:112280263..112280308,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73274 | |EntrezGene=73274 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q6NXH3 | |UniProt=Q6NXH3 | ||
|association_with_transcript=10bp_to_ENSMUST00000047627_5end | |association_with_transcript=10bp_to_ENSMUST00000047627_5end | ||
|cluster_id=chr13:112280263..112280308,- | |||
|description=CAGE_peak_4_at_Gpbp1_5end | |description=CAGE_peak_4_at_Gpbp1_5end | ||
|id=chr13:112280263..112280308,- | |id=chr13:112280263..112280308,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.08e-09!49;UBERON:0000033!3.06e-09!63;UBERON:0000153!1.36e-08!94;UBERON:0007811!3.81e-08!86;UBERON:0002346!4.72e-08!71;UBERON:0003075!4.72e-08!71;UBERON:0007284!4.72e-08!71;UBERON:0002616!7.76e-08!49;UBERON:0001049!2.63e-07!52;UBERON:0005068!2.63e-07!52;UBERON:0006241!2.63e-07!52;UBERON:0007135!2.63e-07!52;UBERON:0000955!2.67e-07!50;UBERON:0006238!2.67e-07!50 | |ontology_enrichment_uberon=UBERON:0003056!1.08e-09!49;UBERON:0000033!3.06e-09!63;UBERON:0000153!1.36e-08!94;UBERON:0007811!3.81e-08!86;UBERON:0002346!4.72e-08!71;UBERON:0003075!4.72e-08!71;UBERON:0007284!4.72e-08!71;UBERON:0002616!7.76e-08!49;UBERON:0001049!2.63e-07!52;UBERON:0005068!2.63e-07!52;UBERON:0006241!2.63e-07!52;UBERON:0007135!2.63e-07!52;UBERON:0000955!2.67e-07!50;UBERON:0006238!2.67e-07!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.66e-07,64;UBERON:0003075,3.66e-07,64;UBERON:0007284,3.66e-07,64;UBERON:0003056,5.33e-07,49 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.671517087647559,0,0.129123323441576,0.422366166455,0.936258105287974,0.34243593645101,0.319088635981346,0,0,0.999329285446988,0.809901069559304,3.49780939064073,0,0.137114433605739,0.42438965179803,9.26971862646661,0,0.261199789138935,0,0,0,0,0.430942465371778,0,0,0.443461021310609,0,0,15.8481681015439,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0,0.257259436035947,0,0,1.82084814773638,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0,0,0.829516898467821,0.540023753326763,1.26194976810829,0.285650984403804,1.32521124570968,0.857435594504678,0.479227355091182,0.919218786610021,2.20231761998777,1.27687338085188,1.38245879930619,1.18697658957174,0.731901148819277,0,1.95428099300967,0,1.5279824777681,0.883885756421003,0.996601765593721,0,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.432982082022428,0,1.01104889002957,1.1418387971906,0,0,0.693941307064543,0,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0.494389935468748,0,0.884610551949874,0.647067399789637,0.662524555381181,0.484875253135222,0,0.585561594023094,1.04723353406728,0,0.11981512450592,0,0.127070227073065,1.9472783122627,0.915001205637253,0.502617408451458,2.08589184230732,0.511430914660661,1.24672826735736,0.648965052271031,0.407357455401265,0.746441823660558,0.252722758433675,0.631325567659422,0.910843100738926,0.689706313300419,1.26043490863744,1.20563854268572,1.49680298132921,1.15302348256365,1.96773621575431,1.81092359517311,0.862271971731369,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,1.74126083261083,0.61734640922383,0.59710280045548,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0,0.946978942340841,0.590292695242212,0.771335564436891,0.465067889500816,0,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.805238512562231,1.05144974282064,0.514523061896422,0,0.264450566663544,0.639864751605702,0.464473343720877,0.644337306610467,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0,0.397912944082302,0,0,0.432276099749388,0,0.569003702859245,0.685491075658373,0,0.407302655690628,0.387904974335251,0.701358198903186,0.379419222745544,0,0.31399745568275,0.123397163921801,0,1.33476084572875,0.786235980452812,0.224862112384854,1.01430060694251,0.72353147925725,1.2731292589071,0,0.972811360650212,0,4.31304619582064,0,0.624075346229121,0,0.358794827043824,0,0.369506380333209,0.568474235311454,0,0.509235257325564,1.40814148973101,0.167506257441816,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0,1.28440471990234,0.937693492737625,0.163934945376675,1.26235463602186,0,0,0.430846795465598,0.238968797952552,0,0.566153061577665,0.809621403349789,0,0,0,0.709700426041343,0.534196811001766,1.62886959353576,0.329940245945071,0,0.485561272309963,0.302323556964751,1.13163047853539,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,1.08036656418786,0.129358683782755,0,1.06404140185364,0.891844088010353,1.15184314421485,0.304464949114599,0.469343416127421,0.63549621259146,0.220528398054962,0.32977250588296,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,0,2.22510362412612,1.02522528478712,0.206386867963223,0.185194527369712,1.50694765603753,0.546776910884101,1.14389086603261,0,0.139951452323658,0.276399947608848,0,0.949007980743406,0,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,59.7514515005242,0,0,2.13896307178452,0.774958940866387,1.35164900392623,1.05621514781179,0.39061315453185,3.35549902162275,15.7029678536904,49.253131070095,0.948033361884535,0,0.718976700153791,0.51968329191118,0.537080087002444,0.993406773906324,0.240390899039938,1.18151621739662,0.807731599585181,0.609654453239999,0.604957110821043,0.682205165178267,0.0962118416403295,0.701261413089414,0.226730383615211,0.443971906748129,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,0.830298780673413,0,1.02440163452481,0.729320151204882,0.838452650511929,0.367687016900028,0.222246727801615,1.85431551515005,2.24643446714271,0.252697211763798,0.25347929989024,0.754505365544305,0.37456602987953,0.576226371643824,0.631790158511746,0,0.463537303779422,0,0.412085900803307,0.883193520806384,1.37147700954166,0,1.1921809497366,0.726732083161643,0.752875043322645,0.507687647350059,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.593175090620871,0.689531376628944,0.818462086339379,0.154936841185966,0.385813221962283,0.249810577937946,0,0.644613162144895,1.14772999241306,0.441182838239031,0.695603506861264 | |phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.671517087647559,0,0.129123323441576,0.422366166455,0.936258105287974,0.34243593645101,0.319088635981346,0,0,0.999329285446988,0.809901069559304,3.49780939064073,0,0.137114433605739,0.42438965179803,9.26971862646661,0,0.261199789138935,0,0,0,0,0.430942465371778,0,0,0.443461021310609,0,0,15.8481681015439,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0,0.257259436035947,0,0,1.82084814773638,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0,0,0.829516898467821,0.540023753326763,1.26194976810829,0.285650984403804,1.32521124570968,0.857435594504678,0.479227355091182,0.919218786610021,2.20231761998777,1.27687338085188,1.38245879930619,1.18697658957174,0.731901148819277,0,1.95428099300967,0,1.5279824777681,0.883885756421003,0.996601765593721,0,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.432982082022428,0,1.01104889002957,1.1418387971906,0,0,0.693941307064543,0,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0.494389935468748,0,0.884610551949874,0.647067399789637,0.662524555381181,0.484875253135222,0,0.585561594023094,1.04723353406728,0,0.11981512450592,0,0.127070227073065,1.9472783122627,0.915001205637253,0.502617408451458,2.08589184230732,0.511430914660661,1.24672826735736,0.648965052271031,0.407357455401265,0.746441823660558,0.252722758433675,0.631325567659422,0.910843100738926,0.689706313300419,1.26043490863744,1.20563854268572,1.49680298132921,1.15302348256365,1.96773621575431,1.81092359517311,0.862271971731369,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,1.74126083261083,0.61734640922383,0.59710280045548,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0,0.946978942340841,0.590292695242212,0.771335564436891,0.465067889500816,0,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.805238512562231,1.05144974282064,0.514523061896422,0,0.264450566663544,0.639864751605702,0.464473343720877,0.644337306610467,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0,0.397912944082302,0,0,0.432276099749388,0,0.569003702859245,0.685491075658373,0,0.407302655690628,0.387904974335251,0.701358198903186,0.379419222745544,0,0.31399745568275,0.123397163921801,0,1.33476084572875,0.786235980452812,0.224862112384854,1.01430060694251,0.72353147925725,1.2731292589071,0,0.972811360650212,0,4.31304619582064,0,0.624075346229121,0,0.358794827043824,0,0.369506380333209,0.568474235311454,0,0.509235257325564,1.40814148973101,0.167506257441816,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0,1.28440471990234,0.937693492737625,0.163934945376675,1.26235463602186,0,0,0.430846795465598,0.238968797952552,0,0.566153061577665,0.809621403349789,0,0,0,0.709700426041343,0.534196811001766,1.62886959353576,0.329940245945071,0,0.485561272309963,0.302323556964751,1.13163047853539,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,1.08036656418786,0.129358683782755,0,1.06404140185364,0.891844088010353,1.15184314421485,0.304464949114599,0.469343416127421,0.63549621259146,0.220528398054962,0.32977250588296,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,0,2.22510362412612,1.02522528478712,0.206386867963223,0.185194527369712,1.50694765603753,0.546776910884101,1.14389086603261,0,0.139951452323658,0.276399947608848,0,0.949007980743406,0,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,59.7514515005242,0,0,2.13896307178452,0.774958940866387,1.35164900392623,1.05621514781179,0.39061315453185,3.35549902162275,15.7029678536904,49.253131070095,0.948033361884535,0,0.718976700153791,0.51968329191118,0.537080087002444,0.993406773906324,0.240390899039938,1.18151621739662,0.807731599585181,0.609654453239999,0.604957110821043,0.682205165178267,0.0962118416403295,0.701261413089414,0.226730383615211,0.443971906748129,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,0.830298780673413,0,1.02440163452481,0.729320151204882,0.838452650511929,0.367687016900028,0.222246727801615,1.85431551515005,2.24643446714271,0.252697211763798,0.25347929989024,0.754505365544305,0.37456602987953,0.576226371643824,0.631790158511746,0,0.463537303779422,0,0.412085900803307,0.883193520806384,1.37147700954166,0,1.1921809497366,0.726732083161643,0.752875043322645,0.507687647350059,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.593175090620871,0.689531376628944,0.818462086339379,0.154936841185966,0.385813221962283,0.249810577937946,0,0.644613162144895,1.14772999241306,0.441182838239031,0.695603506861264 | ||
|short_description=p4@Gpbp1 | |short_description=p4@Gpbp1 | ||
}} | }} |
Latest revision as of 02:42, 27 September 2015
Short description: | p4@Gpbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gpbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 10bp_to_ENSMUST00000047627_5end |
EntrezGene: | Gpbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.66e-07 | 64 |
neural plate | 3.66e-07 | 64 |
presumptive neural plate | 3.66e-07 | 64 |
pre-chordal neural plate | 5.33e-07 | 49 |