FFCP PHASE1:Hg19::chr2:17935147..17935182,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:17935147..17935182,+
|short_description=p3@GEN1
|description=CAGE_peak_3_at_GEN1_5end
|association_with_transcript=0bp_to_NM_182625,uc002rcs.1,uc002rct.2_5...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=348654 | |EntrezGene=348654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26881 | |HGNC=26881 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RS7 | |UniProt=Q17RS7 | ||
|association_with_transcript=0bp_to_NM_182625,uc002rcs.1,uc002rct.2_5end | |||
|cluster_id=chr2:17935147..17935182,+ | |||
|description=CAGE_peak_3_at_GEN1_5end | |||
|id=chr2:17935147..17935182,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.47e-09!112;CL:0000049!3.47e-09!112;CL:0002009!8.83e-09!65;CL:0002194!1.05e-08!63;CL:0000576!1.05e-08!63;CL:0000040!1.05e-08!63;CL:0000559!1.05e-08!63;CL:0000839!1.81e-08!70;CL:0000557!4.55e-08!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.31e-07,59;CL:0000576,3.31e-07,59;CL:0000040,3.31e-07,59;CL:0000559,3.31e-07,59;CL:0002009,3.95e-07,61;CL:0000763,8.00e-07,108;CL:0000049,8.00e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.22e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!4.16e-07!101;UBERON:0001434!4.16e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@GEN1 | |||
}} | }} |
Latest revision as of 11:39, 18 September 2015
Short description: | p3@GEN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GEN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_182625, uc002rcs.1, uc002rct.2_5end |
EntrezGene: | GEN1 |
HGNC: | 26881 |
UniProt: | Q17RS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.31e-07 | 59 |
monocyte | 3.31e-07 | 59 |
monoblast | 3.31e-07 | 59 |
promonocyte | 3.31e-07 | 59 |
macrophage dendritic cell progenitor | 3.95e-07 | 61 |
myeloid cell | 8.00e-07 | 108 |
common myeloid progenitor | 8.00e-07 | 108 |