FFCP PHASE1:Mm9::chr13:105844877..105844901,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52882 | |EntrezGene=52882 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BQP9 | |UniProt=Q8BQP9 | ||
|association_with_transcript=108bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end | |association_with_transcript=108bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end | ||
|cluster_id=chr13:105844877..105844901,- | |||
|description=CAGE_peak_3_at_Rgs7bp_5end | |description=CAGE_peak_3_at_Rgs7bp_5end | ||
|id=chr13:105844877..105844901,- | |id=chr13:105844877..105844901,- | ||
|ontology_enrichment_celltype=CL:0000117!6.57e-10!23;CL:0000337!6.57e-10!23;CL:0000540!9.86e-10!33;CL:0000047!9.86e-10!33;CL:0000031!9.86e-10!33;CL:0000404!9.86e-10!33 | |ontology_enrichment_celltype=CL:0000117!6.57e-10!23;CL:0000337!6.57e-10!23;CL:0000540!9.86e-10!33;CL:0000047!9.86e-10!33;CL:0000031!9.86e-10!33;CL:0000404!9.86e-10!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.01e-13,23;CL:0000337,2.01e-13,23;CL:0000540,2.66e-11,33;CL:0000047,2.66e-11,33;CL:0000031,2.66e-11,33;CL:0000404,2.66e-11,33;CL:0000393,9.73e-09,39;CL:0000211,9.73e-09,39;CL:0002319,2.06e-08,43;CL:0000221,4.25e-08,44;CL:0000133,4.25e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.51e-19!75;UBERON:0001016!3.51e-19!75;UBERON:0001017!1.09e-18!73;UBERON:0005743!1.09e-18!73;UBERON:0001049!7.48e-16!52;UBERON:0005068!7.48e-16!52;UBERON:0006241!7.48e-16!52;UBERON:0007135!7.48e-16!52;UBERON:0004121!9.07e-16!102;UBERON:0000924!9.07e-16!102;UBERON:0006601!9.07e-16!102;UBERON:0000955!3.98e-15!50;UBERON:0006238!3.98e-15!50;UBERON:0002346!4.78e-15!71;UBERON:0003075!4.78e-15!71;UBERON:0007284!4.78e-15!71;UBERON:0002616!1.51e-14!49;UBERON:0002020!5.63e-14!34;UBERON:0000033!1.81e-13!63;UBERON:0003080!9.23e-12!40;UBERON:0003056!1.50e-11!49;UBERON:0002791!2.86e-11!29;UBERON:0003528!2.86e-11!29;UBERON:0001893!2.86e-11!29;UBERON:0002780!3.35e-11!39;UBERON:0001890!3.35e-11!39;UBERON:0006240!3.35e-11!39;UBERON:0002021!3.95e-08!10;UBERON:0000411!3.95e-08!10;UBERON:0001950!3.95e-08!10;UBERON:0000956!7.56e-08!21;UBERON:0001869!7.56e-08!21;UBERON:0000203!7.56e-08!21 | |ontology_enrichment_uberon=UBERON:0000073!3.51e-19!75;UBERON:0001016!3.51e-19!75;UBERON:0001017!1.09e-18!73;UBERON:0005743!1.09e-18!73;UBERON:0001049!7.48e-16!52;UBERON:0005068!7.48e-16!52;UBERON:0006241!7.48e-16!52;UBERON:0007135!7.48e-16!52;UBERON:0004121!9.07e-16!102;UBERON:0000924!9.07e-16!102;UBERON:0006601!9.07e-16!102;UBERON:0000955!3.98e-15!50;UBERON:0006238!3.98e-15!50;UBERON:0002346!4.78e-15!71;UBERON:0003075!4.78e-15!71;UBERON:0007284!4.78e-15!71;UBERON:0002616!1.51e-14!49;UBERON:0002020!5.63e-14!34;UBERON:0000033!1.81e-13!63;UBERON:0003080!9.23e-12!40;UBERON:0003056!1.50e-11!49;UBERON:0002791!2.86e-11!29;UBERON:0003528!2.86e-11!29;UBERON:0001893!2.86e-11!29;UBERON:0002780!3.35e-11!39;UBERON:0001890!3.35e-11!39;UBERON:0006240!3.35e-11!39;UBERON:0002021!3.95e-08!10;UBERON:0000411!3.95e-08!10;UBERON:0001950!3.95e-08!10;UBERON:0000956!7.56e-08!21;UBERON:0001869!7.56e-08!21;UBERON:0000203!7.56e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.77e-32,75;UBERON:0001017,7.37e-32,73;UBERON:0000073,2.33e-31,54;UBERON:0001049,1.96e-28,52;UBERON:0005068,1.96e-28,52;UBERON:0006241,1.96e-28,52;UBERON:0007135,1.96e-28,52;UBERON:0002346,3.67e-25,64;UBERON:0003075,3.67e-25,64;UBERON:0007284,3.67e-25,64;UBERON:0004121,6.74e-24,95;UBERON:0000924,6.74e-24,95;UBERON:0006601,6.74e-24,95;UBERON:0002020,2.59e-23,34;UBERON:0000955,5.44e-23,47;UBERON:0006238,5.44e-23,47;UBERON:0002616,7.10e-22,46;UBERON:0010371,1.31e-20,73;UBERON:0003080,1.24e-18,40;UBERON:0003528,6.43e-18,29;UBERON:0002791,6.43e-18,29;UBERON:0001893,6.43e-18,29;UBERON:0002780,1.51e-17,39;UBERON:0001890,1.51e-17,39;UBERON:0006240,1.51e-17,39;UBERON:0002021,3.65e-15,10;UBERON:0000411,3.65e-15,10;UBERON:0001950,3.65e-15,10;UBERON:0003056,4.80e-15,49;UBERON:0010314,5.41e-14,92;UBERON:0000956,4.27e-13,21;UBERON:0001869,4.27e-13,21;UBERON:0000203,4.27e-13,21;UBERON:0002619,8.34e-13,17;UBERON:0003076,1.46e-10,12;UBERON:0003057,1.46e-10,12;UBERON:0002240,3.98e-08,6;UBERON:0005174,3.98e-08,6;UBERON:0001137,3.98e-08,6;UBERON:0000025,2.69e-07,114;UBERON:0001948,6.53e-07,5;UBERON:0002315,6.53e-07,5;UBERON:0004111,9.37e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.725827286159344,1.4850653216486,0.841299845405528,3.42781181284564,2.65042249141936,1.10241719293459,0.670918297127655,0,27.5289702498472,38.3062014255563,28.1099955858926,0.395658863190582,0.731901148819277,1.56274011167028,12.5632349550621,6.19038871034848,8.55670187550137,4.41942878210502,3.84403538157578,2.79599168737951,0.302904773332736,1.81371744256285,0.869593466105033,0.860423876981386,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.301445281105245,0.470354828542819,0,0.247194967734374,0.722996784599558,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,28.9852989041432,23.2485844562935,0,0,1.19980546198682,0,13.9305294646485,31.5675415944852,2.26177833803156,26.0736480288415,22.7586757023994,28.2591740601002,26.120843353909,0.611036183101898,0.248813941220186,0.505445516867349,0.841767423545896,0,0.229902104433473,0.360124259610698,0.60281927134286,0.136072998302656,0.768682321709099,0.281105173679186,2.06962696591213,0,0.189106080167819,0,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.658239399653922,0.492502392237286,0.324275238183423,0.146199987425332,0.439100230582101,0.402619256281115,22.9216043934899,1.54356918568927,0,0,0.426576501070468,0.232236671860439,0,0.403367049246685,0.444756087689741,0.190225626112559,0.949058123089023,0.164698954724011,0,0.397912944082302,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0.701358198903186,0.252946148497029,0.295220295959204,0,0,0.296452627087149,0.333690211432188,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0.312037673114561,0,0.179397413521912,0.964887042726734,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,10.9174401191699,10.9006868530749,0,0.252470927204373,1.26203287766503,1.17131623288992,0.861693590931196,0.238968797952552,0,0.283076530788832,0,0.876767573733936,1.58115111178609,10.9249247583414,0.425820255624806,0,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0.775284879504663,0,0.712994756769443,0.632073515871632,1.05418608574999,0,1.02131881726136,0,0.388076051348264,0,0,0.535106452806212,0.822745103010605,1.522324745573,0,0,0,0.16488625294148,0.807322133479528,0.904693873922338,0.238744688006273,0.656563598980245,1.45740418314925,14.8340241608408,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.743881101528023,0.523511883968059,0.90730481304255,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0,0.214368379079066,0,23.7195773899168,19.7939851698086,23.4887160510153,15.8104927756193,28.773465830367,27.9495742034189,22.2757425076496,27.0192721934532,32.6262534468627,29.5123377698537,0.31136204275253,0.399024873401031,0.341467211508268,0.972426868273176,1.25767897576789,0.551530525350042,0.888986911206461,0.824140228955577,0.64183841918363,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,1.21647789569252,0.516919220600519,1.42888107384922,0.347652977834566,1.73618298417335,0.412085900803307,0.294397840268795,0.685738504770831,1.06485483695602,0.476872379894642,0.290692833264657,0.846984423737976,0.761531471025089,1.28049581010941,1.31534855718921,0.407412341537585,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,0.154936841185966,1.15743966588685,1.74867404556562,1.16965804222704,1.50409737833809,0.382576664137687,0,0.927471342481686 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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.725827286159344,1.4850653216486,0.841299845405528,3.42781181284564,2.65042249141936,1.10241719293459,0.670918297127655,0,27.5289702498472,38.3062014255563,28.1099955858926,0.395658863190582,0.731901148819277,1.56274011167028,12.5632349550621,6.19038871034848,8.55670187550137,4.41942878210502,3.84403538157578,2.79599168737951,0.302904773332736,1.81371744256285,0.869593466105033,0.860423876981386,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.301445281105245,0.470354828542819,0,0.247194967734374,0.722996784599558,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,28.9852989041432,23.2485844562935,0,0,1.19980546198682,0,13.9305294646485,31.5675415944852,2.26177833803156,26.0736480288415,22.7586757023994,28.2591740601002,26.120843353909,0.611036183101898,0.248813941220186,0.505445516867349,0.841767423545896,0,0.229902104433473,0.360124259610698,0.60281927134286,0.136072998302656,0.768682321709099,0.281105173679186,2.06962696591213,0,0.189106080167819,0,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.658239399653922,0.492502392237286,0.324275238183423,0.146199987425332,0.439100230582101,0.402619256281115,22.9216043934899,1.54356918568927,0,0,0.426576501070468,0.232236671860439,0,0.403367049246685,0.444756087689741,0.190225626112559,0.949058123089023,0.164698954724011,0,0.397912944082302,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0.701358198903186,0.252946148497029,0.295220295959204,0,0,0.296452627087149,0.333690211432188,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0.312037673114561,0,0.179397413521912,0.964887042726734,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,10.9174401191699,10.9006868530749,0,0.252470927204373,1.26203287766503,1.17131623288992,0.861693590931196,0.238968797952552,0,0.283076530788832,0,0.876767573733936,1.58115111178609,10.9249247583414,0.425820255624806,0,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0.775284879504663,0,0.712994756769443,0.632073515871632,1.05418608574999,0,1.02131881726136,0,0.388076051348264,0,0,0.535106452806212,0.822745103010605,1.522324745573,0,0,0,0.16488625294148,0.807322133479528,0.904693873922338,0.238744688006273,0.656563598980245,1.45740418314925,14.8340241608408,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.743881101528023,0.523511883968059,0.90730481304255,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0,0.214368379079066,0,23.7195773899168,19.7939851698086,23.4887160510153,15.8104927756193,28.773465830367,27.9495742034189,22.2757425076496,27.0192721934532,32.6262534468627,29.5123377698537,0.31136204275253,0.399024873401031,0.341467211508268,0.972426868273176,1.25767897576789,0.551530525350042,0.888986911206461,0.824140228955577,0.64183841918363,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,1.21647789569252,0.516919220600519,1.42888107384922,0.347652977834566,1.73618298417335,0.412085900803307,0.294397840268795,0.685738504770831,1.06485483695602,0.476872379894642,0.290692833264657,0.846984423737976,0.761531471025089,1.28049581010941,1.31534855718921,0.407412341537585,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,0.154936841185966,1.15743966588685,1.74867404556562,1.16965804222704,1.50409737833809,0.382576664137687,0,0.927471342481686 | ||
|short_description=p3@Rgs7bp | |short_description=p3@Rgs7bp | ||
}} | }} |
Latest revision as of 01:58, 27 September 2015
Short description: | p3@Rgs7bp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rgs7bp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 108bp_to_ENSMUST00000063551, NM_029879, uc007rtp.1_5end |
EntrezGene: | Rgs7bp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.01e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.01e-13 | 23 |
neuron | 2.66e-11 | 33 |
neuronal stem cell | 2.66e-11 | 33 |
neuroblast | 2.66e-11 | 33 |
electrically signaling cell | 2.66e-11 | 33 |
electrically responsive cell | 9.73e-09 | 39 |
electrically active cell | 9.73e-09 | 39 |
neural cell | 2.06e-08 | 43 |
ectodermal cell | 4.25e-08 | 44 |
neurectodermal cell | 4.25e-08 | 44 |