FFCP PHASE1:Mm9::chr5:129458922..129458941,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231760 | |EntrezGene=231760 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q80U40,D3YXR8 | |UniProt=Q80U40,D3YXR8 | ||
|association_with_transcript=295bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end | |association_with_transcript=295bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end | ||
|cluster_id=chr5:129458922..129458941,- | |||
|description=CAGE_peak_1_at_Rimbp2_5end | |description=CAGE_peak_1_at_Rimbp2_5end | ||
|id=chr5:129458922..129458941,- | |id=chr5:129458922..129458941,- | ||
|ontology_enrichment_celltype=CL:0000117!8.43e-14!23;CL:0000337!8.43e-14!23;CL:0000540!1.91e-11!33;CL:0000047!1.91e-11!33;CL:0000031!1.91e-11!33;CL:0000404!1.91e-11!33;CL:0000393!9.46e-08!39;CL:0000211!9.46e-08!39;CL:0000221!8.32e-07!44;CL:0000133!8.32e-07!44 | |ontology_enrichment_celltype=CL:0000117!8.43e-14!23;CL:0000337!8.43e-14!23;CL:0000540!1.91e-11!33;CL:0000047!1.91e-11!33;CL:0000031!1.91e-11!33;CL:0000404!1.91e-11!33;CL:0000393!9.46e-08!39;CL:0000211!9.46e-08!39;CL:0000221!8.32e-07!44;CL:0000133!8.32e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-17,23;CL:0000337,1.03e-17,23;CL:0000540,1.41e-11,33;CL:0000047,1.41e-11,33;CL:0000031,1.41e-11,33;CL:0000404,1.41e-11,33;CL:0000393,1.62e-08,39;CL:0000211,1.62e-08,39;CL:0000221,3.21e-07,44;CL:0000133,3.21e-07,44;CL:0002319,5.23e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.20e-30!71;UBERON:0003075!1.20e-30!71;UBERON:0007284!1.20e-30!71;UBERON:0001049!4.40e-25!52;UBERON:0005068!4.40e-25!52;UBERON:0006241!4.40e-25!52;UBERON:0007135!4.40e-25!52;UBERON:0000033!6.60e-25!63;UBERON:0001017!8.71e-25!73;UBERON:0005743!8.71e-25!73;UBERON:0000073!2.23e-24!75;UBERON:0001016!2.23e-24!75;UBERON:0000955!5.44e-24!50;UBERON:0006238!5.44e-24!50;UBERON:0004121!1.02e-23!102;UBERON:0000924!1.02e-23!102;UBERON:0006601!1.02e-23!102;UBERON:0002616!3.46e-23!49;UBERON:0003056!5.58e-23!49;UBERON:0003080!4.48e-21!40;UBERON:0002780!2.56e-20!39;UBERON:0001890!2.56e-20!39;UBERON:0006240!2.56e-20!39;UBERON:0002020!5.60e-19!34;UBERON:0002791!7.26e-16!29;UBERON:0003528!7.26e-16!29;UBERON:0001893!7.26e-16!29;UBERON:0007811!1.85e-12!86;UBERON:0000956!4.41e-11!21;UBERON:0001869!4.41e-11!21;UBERON:0000203!4.41e-11!21;UBERON:0000153!8.96e-10!94;UBERON:0002619!3.58e-09!17;UBERON:0002021!5.72e-09!10;UBERON:0000411!5.72e-09!10;UBERON:0001950!5.72e-09!10 | |ontology_enrichment_uberon=UBERON:0002346!1.20e-30!71;UBERON:0003075!1.20e-30!71;UBERON:0007284!1.20e-30!71;UBERON:0001049!4.40e-25!52;UBERON:0005068!4.40e-25!52;UBERON:0006241!4.40e-25!52;UBERON:0007135!4.40e-25!52;UBERON:0000033!6.60e-25!63;UBERON:0001017!8.71e-25!73;UBERON:0005743!8.71e-25!73;UBERON:0000073!2.23e-24!75;UBERON:0001016!2.23e-24!75;UBERON:0000955!5.44e-24!50;UBERON:0006238!5.44e-24!50;UBERON:0004121!1.02e-23!102;UBERON:0000924!1.02e-23!102;UBERON:0006601!1.02e-23!102;UBERON:0002616!3.46e-23!49;UBERON:0003056!5.58e-23!49;UBERON:0003080!4.48e-21!40;UBERON:0002780!2.56e-20!39;UBERON:0001890!2.56e-20!39;UBERON:0006240!2.56e-20!39;UBERON:0002020!5.60e-19!34;UBERON:0002791!7.26e-16!29;UBERON:0003528!7.26e-16!29;UBERON:0001893!7.26e-16!29;UBERON:0007811!1.85e-12!86;UBERON:0000956!4.41e-11!21;UBERON:0001869!4.41e-11!21;UBERON:0000203!4.41e-11!21;UBERON:0000153!8.96e-10!94;UBERON:0002619!3.58e-09!17;UBERON:0002021!5.72e-09!10;UBERON:0000411!5.72e-09!10;UBERON:0001950!5.72e-09!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.90e-34,54;UBERON:0001049,6.37e-32,52;UBERON:0005068,6.37e-32,52;UBERON:0006241,6.37e-32,52;UBERON:0007135,6.37e-32,52;UBERON:0002346,6.83e-31,64;UBERON:0003075,6.83e-31,64;UBERON:0007284,6.83e-31,64;UBERON:0001017,2.82e-29,73;UBERON:0001016,6.26e-28,75;UBERON:0000955,1.04e-27,47;UBERON:0006238,1.04e-27,47;UBERON:0002616,1.12e-26,46;UBERON:0010371,1.28e-26,73;UBERON:0003056,5.11e-26,49;UBERON:0003080,5.73e-26,40;UBERON:0002020,3.17e-25,34;UBERON:0002780,5.59e-25,39;UBERON:0001890,5.59e-25,39;UBERON:0006240,5.59e-25,39;UBERON:0004121,4.65e-24,95;UBERON:0000924,4.65e-24,95;UBERON:0006601,4.65e-24,95;UBERON:0010314,1.20e-23,92;UBERON:0003528,4.31e-21,29;UBERON:0002791,4.31e-21,29;UBERON:0001893,4.31e-21,29;UBERON:0000956,9.63e-15,21;UBERON:0001869,9.63e-15,21;UBERON:0000203,9.63e-15,21;UBERON:0002619,3.20e-12,17;UBERON:0002021,2.44e-11,10;UBERON:0000411,2.44e-11,10;UBERON:0001950,2.44e-11,10;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8 | |||
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| ||
|short_description=p1@Rimbp2 | |short_description=p1@Rimbp2 | ||
}} | }} |
Latest revision as of 22:35, 1 October 2015
Short description: | p1@Rimbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rimbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 295bp_to_ENSMUST00000031370, ENSMUST00000111346, NM_001081388, uc008zsl.1, uc008zsm.1, uc012edx.1_5end |
EntrezGene: | Rimbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.03e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.03e-17 | 23 |
neuron | 1.41e-11 | 33 |
neuronal stem cell | 1.41e-11 | 33 |
neuroblast | 1.41e-11 | 33 |
electrically signaling cell | 1.41e-11 | 33 |
electrically responsive cell | 1.62e-08 | 39 |
electrically active cell | 1.62e-08 | 39 |
ectodermal cell | 3.21e-07 | 44 |
neurectodermal cell | 3.21e-07 | 44 |
neural cell | 5.23e-07 | 43 |