FFCP PHASE1:Mm9::chr11:102807862..102807882,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=23829 | |EntrezGene=23829 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |MCL_coexpression_id=148 | ||
|TSSclassifier=NA | |||
|UniProt=A2AH89,O88992,Q0VF50,Q8R1Z2 | |UniProt=A2AH89,O88992,Q0VF50,Q8R1Z2 | ||
|association_with_transcript=-87bp_to_NM_011795,uc007lsz.2_5end | |association_with_transcript=-87bp_to_NM_011795,uc007lsz.2_5end | ||
|cluster_id=chr11:102807862..102807882,- | |||
|description=CAGE_peak_4_at_C1ql1_5end | |description=CAGE_peak_4_at_C1ql1_5end | ||
|id=chr11:102807862..102807882,- | |id=chr11:102807862..102807882,- | ||
|ontology_enrichment_celltype=CL:0002319!1.01e-21!43;CL:0000221!4.32e-21!44;CL:0000133!4.32e-21!44;CL:0000055!1.45e-19!50;CL:0002453!2.92e-14!8;CL:0000333!7.05e-14!10;CL:0000095!7.05e-14!10;CL:0000243!7.05e-14!10;CL:0000123!7.05e-14!10;CL:0000125!7.05e-14!10;CL:0000030!7.05e-14!10;CL:0000339!7.05e-14!10;CL:0002321!3.30e-12!70;CL:0000220!3.30e-12!70;CL:0000540!4.18e-11!33;CL:0000047!4.18e-11!33;CL:0000031!4.18e-11!33;CL:0000404!4.18e-11!33;CL:0000393!3.62e-10!39;CL:0000211!3.62e-10!39;CL:0000128!4.65e-10!6;CL:0000126!4.65e-10!6;CL:0000127!4.65e-10!6;CL:0002614!8.57e-07!3 | |ontology_enrichment_celltype=CL:0002319!1.01e-21!43;CL:0000221!4.32e-21!44;CL:0000133!4.32e-21!44;CL:0000055!1.45e-19!50;CL:0002453!2.92e-14!8;CL:0000333!7.05e-14!10;CL:0000095!7.05e-14!10;CL:0000243!7.05e-14!10;CL:0000123!7.05e-14!10;CL:0000125!7.05e-14!10;CL:0000030!7.05e-14!10;CL:0000339!7.05e-14!10;CL:0002321!3.30e-12!70;CL:0000220!3.30e-12!70;CL:0000540!4.18e-11!33;CL:0000047!4.18e-11!33;CL:0000031!4.18e-11!33;CL:0000404!4.18e-11!33;CL:0000393!3.62e-10!39;CL:0000211!3.62e-10!39;CL:0000128!4.65e-10!6;CL:0000126!4.65e-10!6;CL:0000127!4.65e-10!6;CL:0002614!8.57e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.38e-56,8;CL:0000333,4.52e-45,10;CL:0000095,4.52e-45,10;CL:0000243,4.52e-45,10;CL:0000123,4.52e-45,10;CL:0000125,4.52e-45,10;CL:0000030,4.52e-45,10;CL:0000339,4.52e-45,10;CL:0000128,1.12e-33,6;CL:0000126,1.12e-33,6;CL:0000127,1.12e-33,6;CL:0000878,4.27e-26,2;CL:0002605,4.27e-26,2;CL:0000129,4.27e-26,2;CL:0002604,4.27e-26,2;CL:0002603,1.02e-25,2;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002194,1.35e-13,4;CL:0000766,1.35e-13,4;CL:0000234,1.35e-13,4;CL:0000576,1.35e-13,4;CL:0000235,1.35e-13,4;CL:0000864,1.35e-13,4;CL:0002009,1.35e-13,4;CL:0000040,1.35e-13,4;CL:0000559,1.35e-13,4;CL:0002321,6.38e-09,70;CL:0000219,1.40e-08,54;CL:0000473,3.49e-08,7;CL:0000557,3.49e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.06e-19!75;UBERON:0001016!7.06e-19!75;UBERON:0001017!3.33e-18!73;UBERON:0005743!3.33e-18!73;UBERON:0004121!1.72e-16!102;UBERON:0000924!1.72e-16!102;UBERON:0006601!1.72e-16!102;UBERON:0003076!3.61e-13!12;UBERON:0003057!3.61e-13!12;UBERON:0002298!1.39e-11!6;UBERON:0002346!6.17e-10!71;UBERON:0003075!6.17e-10!71;UBERON:0007284!6.17e-10!71;UBERON:0000033!1.83e-09!63;UBERON:0004733!4.59e-09!6;UBERON:0004732!4.59e-09!6;UBERON:0002028!4.59e-09!6;UBERON:0007277!4.59e-09!6;UBERON:0001049!9.29e-09!52;UBERON:0005068!9.29e-09!52;UBERON:0006241!9.29e-09!52;UBERON:0007135!9.29e-09!52;UBERON:0002950!3.11e-08!4;UBERON:0001891!3.11e-08!4;UBERON:0009616!3.11e-08!4;UBERON:0002616!3.03e-07!49;UBERON:0000955!4.99e-07!50;UBERON:0006238!4.99e-07!50;UBERON:0002038!8.57e-07!3;UBERON:0002308!8.57e-07!3;UBERON:0009663!8.57e-07!3;UBERON:0009661!8.57e-07!3;UBERON:0006331!8.57e-07!3;UBERON:0000125!8.57e-07!3 | |ontology_enrichment_uberon=UBERON:0000073!7.06e-19!75;UBERON:0001016!7.06e-19!75;UBERON:0001017!3.33e-18!73;UBERON:0005743!3.33e-18!73;UBERON:0004121!1.72e-16!102;UBERON:0000924!1.72e-16!102;UBERON:0006601!1.72e-16!102;UBERON:0003076!3.61e-13!12;UBERON:0003057!3.61e-13!12;UBERON:0002298!1.39e-11!6;UBERON:0002346!6.17e-10!71;UBERON:0003075!6.17e-10!71;UBERON:0007284!6.17e-10!71;UBERON:0000033!1.83e-09!63;UBERON:0004733!4.59e-09!6;UBERON:0004732!4.59e-09!6;UBERON:0002028!4.59e-09!6;UBERON:0007277!4.59e-09!6;UBERON:0001049!9.29e-09!52;UBERON:0005068!9.29e-09!52;UBERON:0006241!9.29e-09!52;UBERON:0007135!9.29e-09!52;UBERON:0002950!3.11e-08!4;UBERON:0001891!3.11e-08!4;UBERON:0009616!3.11e-08!4;UBERON:0002616!3.03e-07!49;UBERON:0000955!4.99e-07!50;UBERON:0006238!4.99e-07!50;UBERON:0002038!8.57e-07!3;UBERON:0002308!8.57e-07!3;UBERON:0009663!8.57e-07!3;UBERON:0009661!8.57e-07!3;UBERON:0006331!8.57e-07!3;UBERON:0000125!8.57e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.08e-13,4;UBERON:0002680,2.08e-13,4;UBERON:0001895,2.08e-13,4;UBERON:0010092,2.08e-13,4;UBERON:0006215,2.08e-13,4;UBERON:0004733,2.87e-09,6;UBERON:0004732,2.87e-09,6;UBERON:0002028,2.87e-09,6;UBERON:0007277,2.87e-09,6;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0001954,3.49e-08,7;UBERON:0003022,3.49e-08,7;UBERON:0002421,3.49e-08,7;UBERON:0000349,3.49e-08,7;UBERON:0002600,3.49e-08,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,4.69434806608824,1.30815093828268,4.17403747195497,18.2764105129826,0.979904951377538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19440154725767,9.60545763303886,0,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.255374676170375,0,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0.780877488593277,0,0,0.222798674082394,0.566153061577665,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,4.69434806608824,1.30815093828268,4.17403747195497,18.2764105129826,0.979904951377538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19440154725767,9.60545763303886,0,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.255374676170375,0,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0.780877488593277,0,0,0.222798674082394,0.566153061577665,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p4@C1ql1 | |short_description=p4@C1ql1 | ||
}} | }} |
Latest revision as of 18:49, 26 September 2015
Short description: | p4@C1ql1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C1ql1_5end |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | -87bp_to_NM_011795, uc007lsz.2_5end |
EntrezGene: | C1ql1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.38e-56 | 8 |
migratory neural crest cell | 4.52e-45 | 10 |
neuron associated cell | 4.52e-45 | 10 |
glial cell (sensu Vertebrata) | 4.52e-45 | 10 |
neuron associated cell (sensu Vertebrata) | 4.52e-45 | 10 |
glial cell | 4.52e-45 | 10 |
glioblast | 4.52e-45 | 10 |
glioblast (sensu Vertebrata) | 4.52e-45 | 10 |
oligodendrocyte | 1.12e-33 | 6 |
macroglial cell | 1.12e-33 | 6 |
astrocyte | 1.12e-33 | 6 |
central nervous system macrophage | 4.27e-26 | 2 |
astrocyte of the cerebral cortex | 4.27e-26 | 2 |
microglial cell | 4.27e-26 | 2 |
astrocyte of the hippocampus | 4.27e-26 | 2 |
astrocyte of the cerebellum | 1.02e-25 | 2 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
monopoietic cell | 1.35e-13 | 4 |
myeloid leukocyte | 1.35e-13 | 4 |
phagocyte | 1.35e-13 | 4 |
monocyte | 1.35e-13 | 4 |
macrophage | 1.35e-13 | 4 |
tissue-resident macrophage | 1.35e-13 | 4 |
macrophage dendritic cell progenitor | 1.35e-13 | 4 |
monoblast | 1.35e-13 | 4 |
promonocyte | 1.35e-13 | 4 |
embryonic cell | 6.38e-09 | 70 |
motile cell | 1.40e-08 | 54 |
defensive cell | 3.49e-08 | 7 |
granulocyte monocyte progenitor cell | 3.49e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.08e-13 | 4 |
regional part of metencephalon | 2.08e-13 | 4 |
metencephalon | 2.08e-13 | 4 |
future metencephalon | 2.08e-13 | 4 |
rhombic lip | 2.08e-13 | 4 |
segmental subdivision of hindbrain | 2.87e-09 | 6 |
segmental subdivision of nervous system | 2.87e-09 | 6 |
hindbrain | 2.87e-09 | 6 |
presumptive hindbrain | 2.87e-09 | 6 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
Ammon's horn | 3.49e-08 | 7 |
lobe parts of cerebral cortex | 3.49e-08 | 7 |
hippocampal formation | 3.49e-08 | 7 |
limbic system | 3.49e-08 | 7 |
limbic lobe | 3.49e-08 | 7 |