FFCP PHASE1:Mm9::chr6:121081031..121081067,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=194401 | |EntrezGene=194401 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_uc009dob.1_5end | |association_with_transcript=-14bp_to_uc009dob.1_5end | ||
|cluster_id=chr6:121081031..121081067,- | |||
|description=CAGE_peak_2_at_Mical3_5end | |description=CAGE_peak_2_at_Mical3_5end | ||
|id=chr6:121081031..121081067,- | |id=chr6:121081031..121081067,- | ||
|ontology_enrichment_celltype=CL:0000117!1.80e-14!23;CL:0000337!1.80e-14!23;CL:0000540!2.98e-14!33;CL:0000047!2.98e-14!33;CL:0000031!2.98e-14!33;CL:0000404!2.98e-14!33;CL:0002319!4.01e-10!43;CL:0000221!4.30e-10!44;CL:0000133!4.30e-10!44;CL:0000393!4.72e-10!39;CL:0000211!4.72e-10!39;CL:0000055!6.61e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.80e-14!23;CL:0000337!1.80e-14!23;CL:0000540!2.98e-14!33;CL:0000047!2.98e-14!33;CL:0000031!2.98e-14!33;CL:0000404!2.98e-14!33;CL:0002319!4.01e-10!43;CL:0000221!4.30e-10!44;CL:0000133!4.30e-10!44;CL:0000393!4.72e-10!39;CL:0000211!4.72e-10!39;CL:0000055!6.61e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-18,23;CL:0000337,1.62e-18,23;CL:0000540,2.27e-15,33;CL:0000047,2.27e-15,33;CL:0000031,2.27e-15,33;CL:0000404,2.27e-15,33;CL:0000393,2.44e-11,39;CL:0000211,2.44e-11,39;CL:0002319,2.43e-09,43;CL:0000221,6.60e-09,44;CL:0000133,6.60e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.65e-28!73;UBERON:0005743!1.65e-28!73;UBERON:0002346!1.46e-27!71;UBERON:0003075!1.46e-27!71;UBERON:0007284!1.46e-27!71;UBERON:0000073!3.01e-27!75;UBERON:0001016!3.01e-27!75;UBERON:0004121!2.86e-26!102;UBERON:0000924!2.86e-26!102;UBERON:0006601!2.86e-26!102;UBERON:0001049!2.35e-25!52;UBERON:0005068!2.35e-25!52;UBERON:0006241!2.35e-25!52;UBERON:0007135!2.35e-25!52;UBERON:0000955!3.82e-24!50;UBERON:0006238!3.82e-24!50;UBERON:0000033!1.88e-23!63;UBERON:0002616!2.35e-23!49;UBERON:0003056!1.02e-21!49;UBERON:0003080!2.43e-20!40;UBERON:0002780!1.23e-19!39;UBERON:0001890!1.23e-19!39;UBERON:0006240!1.23e-19!39;UBERON:0002020!1.24e-19!34;UBERON:0002791!1.09e-16!29;UBERON:0003528!1.09e-16!29;UBERON:0001893!1.09e-16!29;UBERON:0000956!1.03e-11!21;UBERON:0001869!1.03e-11!21;UBERON:0000203!1.03e-11!21;UBERON:0007811!1.45e-09!86;UBERON:0002619!1.65e-09!17;UBERON:0002021!3.71e-08!10;UBERON:0000411!3.71e-08!10;UBERON:0001950!3.71e-08!10;UBERON:0000153!5.41e-08!94 | |ontology_enrichment_uberon=UBERON:0001017!1.65e-28!73;UBERON:0005743!1.65e-28!73;UBERON:0002346!1.46e-27!71;UBERON:0003075!1.46e-27!71;UBERON:0007284!1.46e-27!71;UBERON:0000073!3.01e-27!75;UBERON:0001016!3.01e-27!75;UBERON:0004121!2.86e-26!102;UBERON:0000924!2.86e-26!102;UBERON:0006601!2.86e-26!102;UBERON:0001049!2.35e-25!52;UBERON:0005068!2.35e-25!52;UBERON:0006241!2.35e-25!52;UBERON:0007135!2.35e-25!52;UBERON:0000955!3.82e-24!50;UBERON:0006238!3.82e-24!50;UBERON:0000033!1.88e-23!63;UBERON:0002616!2.35e-23!49;UBERON:0003056!1.02e-21!49;UBERON:0003080!2.43e-20!40;UBERON:0002780!1.23e-19!39;UBERON:0001890!1.23e-19!39;UBERON:0006240!1.23e-19!39;UBERON:0002020!1.24e-19!34;UBERON:0002791!1.09e-16!29;UBERON:0003528!1.09e-16!29;UBERON:0001893!1.09e-16!29;UBERON:0000956!1.03e-11!21;UBERON:0001869!1.03e-11!21;UBERON:0000203!1.03e-11!21;UBERON:0007811!1.45e-09!86;UBERON:0002619!1.65e-09!17;UBERON:0002021!3.71e-08!10;UBERON:0000411!3.71e-08!10;UBERON:0001950!3.71e-08!10;UBERON:0000153!5.41e-08!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.52e-32,54;UBERON:0002346,2.27e-32,64;UBERON:0003075,2.27e-32,64;UBERON:0007284,2.27e-32,64;UBERON:0001017,7.45e-32,73;UBERON:0001049,5.08e-31,52;UBERON:0005068,5.08e-31,52;UBERON:0006241,5.08e-31,52;UBERON:0007135,5.08e-31,52;UBERON:0001016,2.36e-30,75;UBERON:0000955,2.74e-27,47;UBERON:0006238,2.74e-27,47;UBERON:0002616,2.78e-26,46;UBERON:0003056,5.79e-26,49;UBERON:0003080,9.50e-26,40;UBERON:0010371,1.40e-25,73;UBERON:0004121,4.24e-25,95;UBERON:0000924,4.24e-25,95;UBERON:0006601,4.24e-25,95;UBERON:0002780,7.97e-25,39;UBERON:0001890,7.97e-25,39;UBERON:0006240,7.97e-25,39;UBERON:0002020,8.63e-25,34;UBERON:0003528,6.32e-21,29;UBERON:0002791,6.32e-21,29;UBERON:0001893,6.32e-21,29;UBERON:0010314,2.72e-19,92;UBERON:0000956,2.07e-14,21;UBERON:0001869,2.07e-14,21;UBERON:0000203,2.07e-14,21;UBERON:0002619,1.59e-11,17;UBERON:0002021,3.17e-10,10;UBERON:0000411,3.17e-10,10;UBERON:0001950,3.17e-10,10;UBERON:0002420,1.01e-07,8;UBERON:0007245,1.01e-07,8;UBERON:0010009,1.01e-07,8;UBERON:0010011,1.01e-07,8;UBERON:0000454,1.01e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.659058548203415,0,0.55994568650145,0,0,0,0,0,0,0.515672092277442,27.5150386769053,32.797440714866,31.0577387718028,0,0.889294796111139,0,0,0,0.299600110518405,0,10.0578923939223,13.9056116481641,11.7781978356774,9.42648248532552,11.4851641294839,15.4338407010842,19.073248732629,17.4651569455904,13.2139057199266,8.04430229936683,9.67721159514334,28.2236655742615,29.2760459527711,26.045668527838,8.65467296904281,11.2552522006336,11.7654650788144,17.0884579574727,20.5015220350708,18.6399445825301,0,0.226714680320357,2.02905142091174,0,0,0,0,0,0.842666520790511,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.520455980298408,1.82679286987285,1.15307748628029,1.80867168663147,1.41106448562846,0.125666591329675,0.494389935468748,0,0,0,0.220841518460394,0,0,9.36898550436951,5.23616767033638,0.766371165625774,0,0,0,25.7639899776295,21.5025283324754,31.1622793239904,26.5951209894183,24.2929684463814,14.1295870300501,18.1710214635889,0.712875546952214,0,0,0.631325567659422,0.650602214813519,1.14951052216736,3.06105620669094,2.56198190320716,5.44291993210623,3.97152532883034,4.77878795254617,3.10444044886819,0,0.756424320671277,1.75951124163949,0,0.556094498451196,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,1.42046841351126,0.590292695242212,0.308534225774757,0.232533944750408,0.536546802799238,0.583826711835847,0.822799249567402,0,0.405344047729279,0,0,0,16.8231958851302,15.9502149187891,0.330418782983798,0,0.213288250535234,1.16118335930219,1.67527699718721,1.21010114774006,0.889512175379481,0.380451252225118,0,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0.49095073923223,0.252946148497029,0.147610147979602,0.784993639206874,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.482443521363367,0,1.13694847062291,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,9.15138362930414,10.0802050469295,0,0.252470927204373,2.52406575533005,1.56175497718655,1.93881057959519,0.477937595905104,1.11399337041197,0.849229592366497,1.61924280669958,0.876767573733936,2.76701444562566,31.4894890093371,7.2389443456217,0,0,14.0224604526655,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,1.26414703174326,0,1.03135543248187,6.80879211507576,1.62054984628179,2.32845630808958,2.35770738534752,3.3694644392032,4.28085162244969,2.96188237083818,4.87143918583359,0.23467170806371,0,0.441056796109924,0.49465875882444,0.322928853391811,0.361877549568935,0,0.656563598980245,0,8.52956389248344,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.432021363287205,0,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,0.844780627453891,0,0.13020438484395,0.943734099831398,0.483168241652012,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,0,0,0,0.579568782096571,1.87682475451182,10.0733393346996,1.71494703263253,0,39.5326289831947,26.2385384809091,31.5092532391668,18.0445841460872,32.1988784292202,25.6833925112498,21.6007200074178,23.4167025676595,30.3605414019417,23.8169743405837,1.24544817101012,6.78342284781753,4.78054096111576,4.86213434136588,3.98265008993166,3.67687016900028,3.11145418922261,6.59312183164461,7.38114182061175,6.06473308233114,5.0695859978048,5.84741658296836,5.24392441831341,6.14641463086745,5.57124048869449,3.33405583898152,5.79421629724277,4.43691207066522,7.41754621445952,6.62395140604788,4.11443102862498,3.54951612318675,5.48403236878838,5.23247099876383,5.8347815857505,5.58456412085065,4.57319932181931,5.5244639401947,5.83957689537206,6.73370725989286,5.69448086996036,5.61475549540712,4.09231043169689,5.26785260032284,3.08650577569826,14.4890135204009,4.44470056046276,4.51229213501426,1.14772999241306,0,0.695603506861264 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|phase1_expression=0.320297694209588,0,0,0,0,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.659058548203415,0,0.55994568650145,0,0,0,0,0,0,0.515672092277442,27.5150386769053,32.797440714866,31.0577387718028,0,0.889294796111139,0,0,0,0.299600110518405,0,10.0578923939223,13.9056116481641,11.7781978356774,9.42648248532552,11.4851641294839,15.4338407010842,19.073248732629,17.4651569455904,13.2139057199266,8.04430229936683,9.67721159514334,28.2236655742615,29.2760459527711,26.045668527838,8.65467296904281,11.2552522006336,11.7654650788144,17.0884579574727,20.5015220350708,18.6399445825301,0,0.226714680320357,2.02905142091174,0,0,0,0,0,0.842666520790511,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.520455980298408,1.82679286987285,1.15307748628029,1.80867168663147,1.41106448562846,0.125666591329675,0.494389935468748,0,0,0,0.220841518460394,0,0,9.36898550436951,5.23616767033638,0.766371165625774,0,0,0,25.7639899776295,21.5025283324754,31.1622793239904,26.5951209894183,24.2929684463814,14.1295870300501,18.1710214635889,0.712875546952214,0,0,0.631325567659422,0.650602214813519,1.14951052216736,3.06105620669094,2.56198190320716,5.44291993210623,3.97152532883034,4.77878795254617,3.10444044886819,0,0.756424320671277,1.75951124163949,0,0.556094498451196,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,1.42046841351126,0.590292695242212,0.308534225774757,0.232533944750408,0.536546802799238,0.583826711835847,0.822799249567402,0,0.405344047729279,0,0,0,16.8231958851302,15.9502149187891,0.330418782983798,0,0.213288250535234,1.16118335930219,1.67527699718721,1.21010114774006,0.889512175379481,0.380451252225118,0,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0.49095073923223,0.252946148497029,0.147610147979602,0.784993639206874,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.482443521363367,0,1.13694847062291,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,9.15138362930414,10.0802050469295,0,0.252470927204373,2.52406575533005,1.56175497718655,1.93881057959519,0.477937595905104,1.11399337041197,0.849229592366497,1.61924280669958,0.876767573733936,2.76701444562566,31.4894890093371,7.2389443456217,0,0,14.0224604526655,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,1.26414703174326,0,1.03135543248187,6.80879211507576,1.62054984628179,2.32845630808958,2.35770738534752,3.3694644392032,4.28085162244969,2.96188237083818,4.87143918583359,0.23467170806371,0,0.441056796109924,0.49465875882444,0.322928853391811,0.361877549568935,0,0.656563598980245,0,8.52956389248344,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.432021363287205,0,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,0.844780627453891,0,0.13020438484395,0.943734099831398,0.483168241652012,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,0,0,0,0.579568782096571,1.87682475451182,10.0733393346996,1.71494703263253,0,39.5326289831947,26.2385384809091,31.5092532391668,18.0445841460872,32.1988784292202,25.6833925112498,21.6007200074178,23.4167025676595,30.3605414019417,23.8169743405837,1.24544817101012,6.78342284781753,4.78054096111576,4.86213434136588,3.98265008993166,3.67687016900028,3.11145418922261,6.59312183164461,7.38114182061175,6.06473308233114,5.0695859978048,5.84741658296836,5.24392441831341,6.14641463086745,5.57124048869449,3.33405583898152,5.79421629724277,4.43691207066522,7.41754621445952,6.62395140604788,4.11443102862498,3.54951612318675,5.48403236878838,5.23247099876383,5.8347815857505,5.58456412085065,4.57319932181931,5.5244639401947,5.83957689537206,6.73370725989286,5.69448086996036,5.61475549540712,4.09231043169689,5.26785260032284,3.08650577569826,14.4890135204009,4.44470056046276,4.51229213501426,1.14772999241306,0,0.695603506861264 | ||
|short_description=p2@Mical3 | |short_description=p2@Mical3 | ||
}} | }} |
Latest revision as of 14:03, 26 September 2015
Short description: | p2@Mical3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mical3_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -14bp_to_uc009dob.1_5end |
EntrezGene: | Mical3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.62e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-18 | 23 |
neuron | 2.27e-15 | 33 |
neuronal stem cell | 2.27e-15 | 33 |
neuroblast | 2.27e-15 | 33 |
electrically signaling cell | 2.27e-15 | 33 |
electrically responsive cell | 2.44e-11 | 39 |
electrically active cell | 2.44e-11 | 39 |
neural cell | 2.43e-09 | 43 |
ectodermal cell | 6.60e-09 | 44 |
neurectodermal cell | 6.60e-09 | 44 |