FFCP PHASE1:Hg19::chr2:204398141..204398180,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:204398141..204398180,-
|short_description=p7@RAPH1
|description=CAGE_peak_7_at_RAPH1_5end
|association_with_transcript=0bp_to_ENST00000428637_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65059 | |EntrezGene=65059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14436 | |HGNC=14436 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLG4 | |UniProt=C9JLG4 | ||
|association_with_transcript=0bp_to_ENST00000428637_5end | |||
|cluster_id=chr2:204398141..204398180,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_7_at_RAPH1_5end | |||
|id=chr2:204398141..204398180,- | |||
|ontology_enrichment_celltype=CL:0000055!1.65e-07!180;CL:0000667!6.48e-07!6;CL:0000058!6.48e-07!6;CL:0000138!6.48e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.14e-13;5!CL:0000515;2.71e-12;3!CL:0000138;8.55e-11;6!CL:0001014;6.61e-10;2!CL:0001016;6.61e-10;2!CL:0000056;2.45e-09;4!CL:0000990;1.85e-07;8!CL:0000153;3.27e-07;9!CL:0000447;3.27e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.56e-13,5;CL:0000058,8.91e-11,6;CL:0000138,8.91e-11,6;CL:0001014,6.63e-10,2;CL:0001016,6.63e-10,2;CL:0000515,1.68e-09,4;CL:0000990,1.57e-07,8;CL:0000153,3.35e-07,9;CL:0000447,3.35e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;2.45e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.34e-07!286;UBERON:0004872!8.79e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.47e-08;2!UBERON:0000948;6.26e-08;22!UBERON:0007100;7.28e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.17e-08,2;UBERON:0000948,3.03e-07,24;UBERON:0005498,3.03e-07,24;UBERON:0004140,3.03e-07,24;UBERON:0009881,3.03e-07,24;UBERON:0004141,3.03e-07,24;UBERON:0003084,3.03e-07,24;UBERON:0007005,3.03e-07,24;UBERON:0004139,3.03e-07,24;UBERON:0004291,3.03e-07,24 | |||
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| ||
|short_description=p7@RAPH1 | |||
}} | }} |
Latest revision as of 15:53, 19 September 2015
Short description: | p7@RAPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RAPH1_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 0bp_to_ENST00000428637_5end |
EntrezGene: | RAPH1 |
HGNC: | 14436 |
UniProt: | C9JLG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.56e-13 | 5 |
chondroblast | 8.91e-11 | 6 |
chondrocyte | 8.91e-11 | 6 |
CD1a-positive Langerhans cell | 6.63e-10 | 2 |
immature CD1a-positive Langerhans cell | 6.63e-10 | 2 |
skeletal muscle myoblast | 1.68e-09 | 4 |
conventional dendritic cell | 1.57e-07 | 8 |
GAG secreting cell | 3.35e-07 | 9 |
carbohydrate secreting cell | 3.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 1.17e-08 | 2 |
heart | 3.03e-07 | 24 |
primitive heart tube | 3.03e-07 | 24 |
primary heart field | 3.03e-07 | 24 |
anterior lateral plate mesoderm | 3.03e-07 | 24 |
heart tube | 3.03e-07 | 24 |
heart primordium | 3.03e-07 | 24 |
cardiac mesoderm | 3.03e-07 | 24 |
cardiogenic plate | 3.03e-07 | 24 |
heart rudiment | 3.03e-07 | 24 |