FFCP PHASE1:Hg19::chr2:205410219..205410268,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:205410219..205410268,+
|short_description=p1@PARD3B
|description=CAGE_peak_1_at_PARD3B_5end
|association_with_transcript=-247bp_to_ENST00000406610,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=117583 | |EntrezGene=117583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14446 | |HGNC=14446 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TEW8,E9PE87 | |UniProt=Q8TEW8,E9PE87 | ||
|association_with_transcript=-247bp_to_ENST00000406610,ENST00000415947,NM_057177,NM_152526,NM_205863,uc002vao.1,uc002vap.1,uc002vaq.1,uc002var.1,uc010fub.1_5end | |||
|cluster_id=chr2:205410219..205410268,+ | |||
|description=CAGE_peak_1_at_PARD3B_5end | |||
|id=chr2:205410219..205410268,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.93e-16!115;UBERON:0000475!2.56e-15!365;UBERON:0000468!1.87e-12!659;UBERON:0000481!7.39e-12!347;UBERON:0000477!8.51e-12!286;UBERON:0000483!2.99e-11!309;UBERON:0000119!4.24e-11!312;UBERON:0004111!7.40e-10!241;UBERON:0000467!1.92e-09!625;UBERON:0000480!3.29e-09!626;UBERON:0002346!6.45e-09!90;UBERON:0000064!1.01e-08!219;UBERON:0003075!1.12e-08!86;UBERON:0007284!1.12e-08!86;UBERON:0000033!1.48e-08!123;UBERON:0000062!1.61e-08!511;UBERON:0001049!2.31e-08!57;UBERON:0005068!2.31e-08!57;UBERON:0006241!2.31e-08!57;UBERON:0007135!2.31e-08!57;UBERON:0000153!2.82e-08!129;UBERON:0007811!2.82e-08!129;UBERON:0002616!4.20e-08!59;UBERON:0000924!6.21e-08!173;UBERON:0006601!6.21e-08!173;UBERON:0004121!1.14e-07!169;UBERON:0000073!1.79e-07!94;UBERON:0001016!1.79e-07!94;UBERON:0005743!2.03e-07!86;UBERON:0000955!2.41e-07!69;UBERON:0006238!2.41e-07!69;UBERON:0000025!3.46e-07!194;UBERON:0001017!4.66e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.71e-08;17!UBERON:0005409;3.18e-08;22!UBERON:0004921;2.20e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.48e-17,114;UBERON:0011216,3.16e-10,223;UBERON:0003075,6.10e-09,82;UBERON:0007284,6.10e-09,82;UBERON:0002346,6.65e-09,86;UBERON:0000483,8.77e-09,306;UBERON:0000119,1.70e-08,309;UBERON:0010314,1.99e-08,132;UBERON:0000160,2.78e-08,17;UBERON:0001049,2.84e-08,56;UBERON:0005068,2.84e-08,56;UBERON:0006241,2.84e-08,56;UBERON:0007135,2.84e-08,56;UBERON:0004111,8.54e-08,240;UBERON:0005409,1.09e-07,25;UBERON:0004121,1.41e-07,171;UBERON:0000924,1.41e-07,171;UBERON:0006601,1.41e-07,171;UBERON:0000073,3.06e-07,53;UBERON:0002616,3.06e-07,53;UBERON:0010371,5.97e-07,104;UBERON:0000955,7.02e-07,68;UBERON:0006238,7.02e-07,68 | |||
|phase1_expression=4.90531624030503,3.63970890614671,5.92008497203079,5.00366491765652,6.70441641640932,4.36169262050184,2.53299878168311,0.631719873426831,2.35067065379855,0.982935746006035,1.39560233594486,0,0,0.495065411840187,0.331397375727916,2.6893005858071,1.20538905604795,0,1.95173119516203,1.35433163884467,1.63200552995402,2.19418305034661,7.15589967827642,3.69560947696787,7.90918629447258,0,0,0,0,0,0.464448369948228,0,0.6024118375565,0,0,0,1.17440175733939,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,1.05353633910031,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,1.94826728407911,0,0,0,0,0.128091319725675,0,0.328875809207352,0,0.579606171470105,0.444859689486181,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0.403213486449465,0,0.579297615531196,0,0.670700859703636,1.66221330396589,1.0843174571537,2.00535164254356,2.02785126545153,0,0.486634870302636,4.44313640671119,3.1042115644759,5.27008714158756,4.58426764241994,0,0.370784442784429,0.324547393654683,0,0.26591592103773,0,0,0,2.98143611050058,0.860234595106124,1.38856200643038,4.52246353539208,1.25849830862972,0.550236083880135,1.8809546988313,3.10100111003195,3.5576626268671,6.02497102976406,2.01414658554573,2.28081631715554,1.22031028774085,3.30896772311282,1.62028389576352,5.44728342532887,3.36794058939255,3.26573293401634,1.53316637465883,0.949265659568129,2.38162267109529,0,0,0,2.48485975847659,0.886413581652058,8.474187572046,4.87622255272983,0.709336764396714,1.12135520028461,0,0,2.8008993185979,1.34710672069688,0.980771418680752,2.11900398702904,0.576175924479999,0.70296429550139,1.87296046098192,1.1409436430889,0.747243402759005,1.29177948508141,0.809364721840658,0.561803226808994,2.65400422631361,0.859840221182376,1.85986406116378,1.18800285728205,4.94533858557114,0,0,1.17835279767846,1.62654075833553,3.60183350129438,3.5118209670467,5.82326812018137,5.55880817954408,0.453728732640084,4.66413052791041,7.47450860864986,4.66250182551036,3.60109315301283,4.43125875725287,10.8209026819164,5.02515512095292,3.54430297706659,0.974370051611986,6.31084435610286,9.94138905336833,10.345347636404,2.84007674013291,1.41052937518696,1.52604533079439,0.773043412653187,1.09098448236334,2.58124135850103,0.975789649036763,0.662648841607426,0.69716365721711,1.14027160516907,0.504641701751257,0.36497735907583,4.69348596989448,1.28648187638577,1.38134921352481,3.25057549622385,3.60939740834793,0.709840800239063,1.01150814046861,0.482022059766964,0.992645754591546,0.653638332277218,0.474541238222193,1.07865046528132,0.784885860501384,0.38474715694639,2.95262181849859,2.80483547606892,1.6462960453256,0,0,1.96565443335525,2.95394953340702,0,4.05861847192275,0.686271241194102,0.658501712451753,0,0.703702806881416,0.370353780634118,1.3032332212413,1.03993478527958,2.88662684050547,3.70977295920246,1.29149563659404,1.87676382089396,0.925971025153221,1.71228737011138,0,0.858486162094873,0,0,0.148631162288728,0,1.17587489739202,0.425325291727159,0.0895585227028483,0,0,0,1.76096868026452,1.24396869324463,1.72943944100354,1.51490920111656,1.14296209725904,0,0,1.71072446022705,1.13110241973656,0.901029173531752,2.28661146104463,0.784917590417525,1.74384027533312,0.2933531432838,3.87815147273333,7.15312891703765,0.845302752556,6.11657668145202,4.16029747645464,0.257207374262142,0,0,1.57275793023962,0,0.823240336780769,0.65147236858747,1.06617584622764,0,3.01439377059586,0,0.899756920638513,0,0,0,3.59437283237374,6.89171615004683,1.42636905040718,3.04040744001916,4.9314317412092,3.58121926479791,0,0,0,0.256686072559497,1.01637849688985,1.30139853857622,0,0.335032530668698,1.91381625495949,0,0,0,0.981531933753119,0.500170521059677,0.813795071099207,5.19927153827018,4.10386674233472,5.99269177128952,5.27136367467209,4.51419149591578,0,2.0694614258501,0,1.29058417979192,3.90976265106373,2.15381273209015,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,3.72161711728165,10.2819522103002,2.24528075546459,3.97231362692673,4.09365799253363,3.86049410744658,5.93672265779964,0.616838775210622,0.355123450626254,0.657017248110473,0.519254429183621,0.116210378459959,4.59265908448164,0.802025881213139,0.828728900423067,2.64073230778596,2.1850940160806,5.24497659837697,1.35359883872224,1.15523005656622,0,0,0.73886140225013,3.4120015221269,0.850468526382578,0.647747748306418,1.54227252690289,0,3.01013864312912,1.27438136522519,1.66215201785745,0.895499018888713,0,0,1.02580050046556,1.96808787419823,1.30151357865721,4.94596855909067,2.01452822600355,2.31026599777646,0,0,1.6068392984416,1.7400729292582,1.3864375540318,1.38153307253517,0.964856007391714,3.75970857038958,2.90033387828457,1.96021243057032,1.51354460599453,0.165284915360978,0.384380134730212,2.80747967488085,0.708104465988849,0,1.5740617341532,0,0.308033580176089,0.532306030317022,0,0.74129687641568,0.715624433709956,2.60510858551767,4.11293252134344,6.4814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|phase1_expression=4.90531624030503,3.63970890614671,5.92008497203079,5.00366491765652,6.70441641640932,4.36169262050184,2.53299878168311,0.631719873426831,2.35067065379855,0.982935746006035,1.39560233594486,0,0,0.495065411840187,0.331397375727916,2.6893005858071,1.20538905604795,0,1.95173119516203,1.35433163884467,1.63200552995402,2.19418305034661,7.15589967827642,3.69560947696787,7.90918629447258,0,0,0,0,0,0.464448369948228,0,0.6024118375565,0,0,0,1.17440175733939,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,1.05353633910031,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,1.94826728407911,0,0,0,0,0.128091319725675,0,0.328875809207352,0,0.579606171470105,0.444859689486181,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0.403213486449465,0,0.579297615531196,0,0.670700859703636,1.66221330396589,1.0843174571537,2.00535164254356,2.02785126545153,0,0.486634870302636,4.44313640671119,3.1042115644759,5.27008714158756,4.58426764241994,0,0.370784442784429,0.324547393654683,0,0.26591592103773,0,0,0,2.98143611050058,0.860234595106124,1.38856200643038,4.52246353539208,1.25849830862972,0.550236083880135,1.8809546988313,3.10100111003195,3.5576626268671,6.02497102976406,2.01414658554573,2.28081631715554,1.22031028774085,3.30896772311282,1.62028389576352,5.44728342532887,3.36794058939255,3.26573293401634,1.53316637465883,0.949265659568129,2.38162267109529,0,0,0,2.48485975847659,0.886413581652058,8.474187572046,4.87622255272983,0.709336764396714,1.12135520028461,0,0,2.8008993185979,1.34710672069688,0.980771418680752,2.11900398702904,0.576175924479999,0.70296429550139,1.87296046098192,1.1409436430889,0.747243402759005,1.29177948508141,0.809364721840658,0.561803226808994,2.65400422631361,0.859840221182376,1.85986406116378,1.18800285728205,4.94533858557114,0,0,1.17835279767846,1.62654075833553,3.60183350129438,3.5118209670467,5.82326812018137,5.55880817954408,0.453728732640084,4.66413052791041,7.47450860864986,4.66250182551036,3.60109315301283,4.43125875725287,10.8209026819164,5.02515512095292,3.54430297706659,0.974370051611986,6.31084435610286,9.94138905336833,10.345347636404,2.84007674013291,1.41052937518696,1.52604533079439,0.773043412653187,1.09098448236334,2.58124135850103,0.975789649036763,0.662648841607426,0.69716365721711,1.14027160516907,0.504641701751257,0.36497735907583,4.69348596989448,1.28648187638577,1.38134921352481,3.25057549622385,3.60939740834793,0.709840800239063,1.01150814046861,0.482022059766964,0.992645754591546,0.653638332277218,0.474541238222193,1.07865046528132,0.784885860501384,0.38474715694639,2.95262181849859,2.80483547606892,1.6462960453256,0,0,1.96565443335525,2.95394953340702,0,4.05861847192275,0.686271241194102,0.658501712451753,0,0.703702806881416,0.370353780634118,1.3032332212413,1.03993478527958,2.88662684050547,3.70977295920246,1.29149563659404,1.87676382089396,0.925971025153221,1.71228737011138,0,0.858486162094873,0,0,0.148631162288728,0,1.17587489739202,0.425325291727159,0.0895585227028483,0,0,0,1.76096868026452,1.24396869324463,1.72943944100354,1.51490920111656,1.14296209725904,0,0,1.71072446022705,1.13110241973656,0.901029173531752,2.28661146104463,0.784917590417525,1.74384027533312,0.2933531432838,3.87815147273333,7.15312891703765,0.845302752556,6.11657668145202,4.16029747645464,0.257207374262142,0,0,1.57275793023962,0,0.823240336780769,0.65147236858747,1.06617584622764,0,3.01439377059586,0,0.899756920638513,0,0,0,3.59437283237374,6.89171615004683,1.42636905040718,3.04040744001916,4.9314317412092,3.58121926479791,0,0,0,0.256686072559497,1.01637849688985,1.30139853857622,0,0.335032530668698,1.91381625495949,0,0,0,0.981531933753119,0.500170521059677,0.813795071099207,5.19927153827018,4.10386674233472,5.99269177128952,5.27136367467209,4.51419149591578,0,2.0694614258501,0,1.29058417979192,3.90976265106373,2.15381273209015,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,3.72161711728165,10.2819522103002,2.24528075546459,3.97231362692673,4.09365799253363,3.86049410744658,5.93672265779964,0.616838775210622,0.355123450626254,0.657017248110473,0.519254429183621,0.116210378459959,4.59265908448164,0.802025881213139,0.828728900423067,2.64073230778596,2.1850940160806,5.24497659837697,1.35359883872224,1.15523005656622,0,0,0.73886140225013,3.4120015221269,0.850468526382578,0.647747748306418,1.54227252690289,0,3.01013864312912,1.27438136522519,1.66215201785745,0.895499018888713,0,0,1.02580050046556,1.96808787419823,1.30151357865721,4.94596855909067,2.01452822600355,2.31026599777646,0,0,1.6068392984416,1.7400729292582,1.3864375540318,1.38153307253517,0.964856007391714,3.75970857038958,2.90033387828457,1.96021243057032,1.51354460599453,0.165284915360978,0.384380134730212,2.80747967488085,0.708104465988849,0,1.5740617341532,0,0.308033580176089,0.532306030317022,0,0.74129687641568,0.715624433709956,2.60510858551767,4.11293252134344,6.4814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| ||
|short_description=p1@PARD3B | |||
}} | }} |
Latest revision as of 16:35, 19 September 2015
Short description: | p1@PARD3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARD3B_5end |
Coexpression cluster: | NA |
Association with transcript: | -247bp_to_ENST00000406610, ENST00000415947, NM_057177, NM_152526, NM_205863, uc002vao.1, uc002vap.1, uc002vaq.1, uc002var.1, uc010fub.1_5end |
EntrezGene: | PARD3B |
HGNC: | 14446 |
UniProt: | Q8TEW8E9PE87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.48e-17 | 114 |
organ system subdivision | 3.16e-10 | 223 |
neural plate | 6.10e-09 | 82 |
presumptive neural plate | 6.10e-09 | 82 |
neurectoderm | 6.65e-09 | 86 |
epithelium | 8.77e-09 | 306 |
cell layer | 1.70e-08 | 309 |
structure with developmental contribution from neural crest | 1.99e-08 | 132 |
intestine | 2.78e-08 | 17 |
neural tube | 2.84e-08 | 56 |
neural rod | 2.84e-08 | 56 |
future spinal cord | 2.84e-08 | 56 |
neural keel | 2.84e-08 | 56 |
anatomical conduit | 8.54e-08 | 240 |
gastrointestinal system | 1.09e-07 | 25 |
ectoderm-derived structure | 1.41e-07 | 171 |
ectoderm | 1.41e-07 | 171 |
presumptive ectoderm | 1.41e-07 | 171 |
regional part of nervous system | 3.06e-07 | 53 |
regional part of brain | 3.06e-07 | 53 |
ecto-epithelium | 5.97e-07 | 104 |
brain | 7.02e-07 | 68 |
future brain | 7.02e-07 | 68 |