FFCP PHASE1:Hg19::chr2:216235259..216235264,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:216235259..216235264,-
|short_description=p59@FN1
|description=CAGE_peak_59_at_FN1_5end
|association_with_transcript=-16bp_to_ENST00000480024_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000480024_5end | |||
|cluster_id=chr2:216235259..216235264,- | |||
|description=CAGE_peak_59_at_FN1_5end | |||
|id=chr2:216235259..216235264,- | |||
|ontology_enrichment_celltype=CL:0000055!8.41e-18!180;CL:0000057!2.09e-15!75;CL:0000680!2.86e-09!57;CL:0000056!2.86e-09!57;CL:0000355!2.86e-09!57;CL:0002620!1.31e-08!23;CL:0000183!1.79e-08!59;CL:0002371!2.20e-08!591;CL:0000187!1.04e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000680;1.13e-11;7!CL:0000188;6.85e-09;9!CL:0000594;5.35e-08;3!CL:0000515;1.95e-07;3!CL:0002590;2.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.39e-09,76;CL:0000188,8.82e-09,9;CL:0000594,7.21e-08,3;CL:0002590,3.65e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.74e-11!143;UBERON:0000914!2.40e-10!83;UBERON:0002329!2.40e-10!83;UBERON:0003077!2.40e-10!83;UBERON:0003059!2.40e-10!83;UBERON:0007282!2.40e-10!83;UBERON:0009618!2.40e-10!83;UBERON:0007285!2.40e-10!83;UBERON:0004290!1.38e-09!70;UBERON:0003102!1.78e-08!95;UBERON:0000490!1.82e-08!138;UBERON:0002199!2.29e-08!45;UBERON:0002416!2.29e-08!45;UBERON:0001134!6.30e-08!61;UBERON:0002036!6.30e-08!61;UBERON:0003082!6.30e-08!61;UBERON:0002097!6.92e-08!40;UBERON:0000475!7.96e-08!365;UBERON:0000486!1.26e-07!82;UBERON:0002385!2.46e-07!63;UBERON:0001015!2.46e-07!63;UBERON:0000383!2.46e-07!63;UBERON:0000119!2.54e-07!312;UBERON:0000483!3.71e-07!309;UBERON:0002100!7.20e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.95e-10;16!UBERON:0002036;3.95e-10;16!UBERON:0005284;3.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,3.39e-07,5;UBERON:0006876,9.91e-07,11 | |||
|phase1_expression=1.45342703416445,1.2846031433459,1.26858963686374,0,0,0.872338524100369,0,0.631719873426831,0,0,0,4.58726881473362,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0.361439152384566,0,0.144846518960824,2.3858578411533,14.5990461090791,0.472674085820339,2.88248216701333,1.75669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0.516833518338658,0,0.33472061276467,0,0,0.732186172644509,0,1.62028389576352,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,0,0,0,0,3.97577561356255,0.633152558322899,2.38336525463794,2.29469296599051,0,0,0,1.2333377420858,3.7345324247972,1.48181739276657,1.79808093424805,0.302714855289863,1.72852777344,0,0,0,0.597794722207204,0.939475989150119,0.809364721840658,0.98315564691574,0.408308342509787,0.61417158655884,0,1.18800285728205,0,0.910161361938026,0,0.168336113954066,0.375355559615893,0,0.877955241761676,1.22595118319608,0.150238058906597,0.340296549480063,1.97328599257748,0.85422955527427,1.05965950579781,0.900273288253207,0.309157587715317,3.09168648054755,0,6.75105328965065,1.75386609290158,44.17591049272,13.8995346949872,0.323292113637624,1.42003837006646,0.705264687593482,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,10.1404027857465,0,1.18157981336281,0,0,0,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.904902010304444,0,0,3.19125739901845,0,1.02882949704857,0,0.799266537048298,0.142977993658148,0,0,0.65147236858747,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,1.15825045334063,15.4107241912788,1.79060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,2.07970861530807,51.7444067511769,2.36553622550902,1.05427273493442,0,0,0,0,0.553107505625109,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0.496215615637554,4.14347327877769,2.24528075546459,1.28139149255701,0.511707249066704,1.60853921143608,0,0.616838775210622,1.24293207719189,0.246381468041427,0,0.348631135379878,0.241718899183244,2.40607764363942,0,0.229628896329213,0.364182336013434,0.262248829918848,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0.647747748306418,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.290012154876366,1.54048617114644,2.30255512089194,2.06754858726796,7.41199689591088,6.96080130788297,1.19317278382541,0.801288320820636,0.826424576804891,1.34533047155574,4.46644493731044,0,0,2.83331112147576,0.6970372701606,0,0,0,0.18532421910392,1.14499909393593,1.116475108079,4.11293252134344,1.5250415513906,0,0,0.636406495851874,0,1.97859703341646,0.54907405947211,0,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.430234056612155,0,0.35667105148125,0.709522128141196,0,0,0.75894634753143,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,2.22617410045812,0,0,0.796991953004279,0,0,0,0,3.42143546427988,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,2.33283690706603,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,5.74202087517455,0.183195186803725,4.79731298416771,0,0,0,0,0,0,0,0,0.210998064528027,0,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.581934098930517,0,0,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0.859530882839914,0,0,0.687481272035051,0,0,0,0,0.201550417460179,0.720599767084807,0,0.315132729228895,0.164831716762333,0.741438982396034,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,1.63293680054705,0,0,2.21504428321048,0,0.439656701034247,0,0.646414781807753,0,0,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.606596470166591,0.285465333544967,0.235265819698172,0,0,3.58211526928498,1.40227985908335,2.77402930751307,2.08343305802598,3.52195062453605,1.77962244319307,0.457680136793847,2.7221566277383,0.466311601748341,0.295710299979268,0.318593534327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| ||
|short_description=p59@FN1 | |||
}} | }} |
Latest revision as of 01:53, 20 September 2015
Short description: | p59@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_59_at_FN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000480024_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.39e-09 | 76 |
cell of skeletal muscle | 8.82e-09 | 9 |
skeletal muscle satellite cell | 7.21e-08 | 3 |
smooth muscle cell of the brain vasculature | 3.65e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 3.39e-07 | 5 |
vasculature of organ | 9.91e-07 | 11 |