FFCP PHASE1:Hg19::chr2:216995388..216995405,+: Difference between revisions
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|id=chr2:216995388..216995405,+
|short_description=p16@XRCC5
|description=CAGE_peak_16_at_XRCC5_5end
|association_with_transcript=-27bp_to_ENST00000471649_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7520 | |EntrezGene=7520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12833 | |HGNC=12833 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000471649_5end | |||
|cluster_id=chr2:216995388..216995405,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_16_at_XRCC5_5end | |||
|id=chr2:216995388..216995405,+ | |||
|ontology_enrichment_celltype=CL:0002195!2.49e-20!2;CL:0002571!2.49e-20!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!9.05e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.88e-13!19;UBERON:0006925!9.88e-13!19;UBERON:0008836!9.88e-13!19;UBERON:0000998!5.05e-11!1;UBERON:0006868!5.05e-11!1;UBERON:0008835!5.61e-11!22;UBERON:0003894!5.61e-11!22;UBERON:0009854!1.71e-10!23;UBERON:0007499!1.22e-09!25;UBERON:0009497!1.22e-09!25;UBERON:0000015!1.22e-09!25;UBERON:0002423!1.22e-09!25;UBERON:0006235!1.22e-09!25;UBERON:0004161!1.22e-09!25;UBERON:0005057!2.90e-09!26;UBERON:0009856!2.90e-09!26;UBERON:0005172!7.10e-08!55;UBERON:0005173!7.10e-08!55;UBERON:0002365!9.65e-08!31;UBERON:0002330!9.65e-08!31;UBERON:0002417!5.01e-07!61;UBERON:0000916!5.01e-07!61;UBERON:0002368!7.79e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-11;19!UBERON:0006925;1.91e-11;19!UBERON:0002423;5.95e-09;25!UBERON:0002365;1.25e-07;31!UBERON:0002330;1.25e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-11,19;UBERON:0006925,1.91e-11,19;UBERON:0008836,1.91e-11,19;UBERON:0008835,4.96e-10,22;UBERON:0003894,4.96e-10,22;UBERON:0009854,1.22e-09,23;UBERON:0007499,5.95e-09,25;UBERON:0009497,5.95e-09,25;UBERON:0000015,5.95e-09,25;UBERON:0002423,5.95e-09,25;UBERON:0006235,5.95e-09,25;UBERON:0004161,5.95e-09,25;UBERON:0009856,1.20e-08,26;UBERON:0002365,2.05e-07,31;UBERON:0002330,2.05e-07,31 | |||
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|short_description=p16@XRCC5 | |||
}} | }} |
Latest revision as of 05:58, 20 September 2015
Short description: | p16@XRCC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_XRCC5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -27bp_to_ENST00000471649_5end |
EntrezGene: | XRCC5 |
HGNC: | 12833 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-11 | 19 |
digestive gland | 1.91e-11 | 19 |
liver bud | 1.91e-11 | 19 |
hepatic diverticulum | 4.96e-10 | 22 |
liver primordium | 4.96e-10 | 22 |
digestive tract diverticulum | 1.22e-09 | 23 |
epithelial sac | 5.95e-09 | 25 |
epithelium of foregut-midgut junction | 5.95e-09 | 25 |
anatomical boundary | 5.95e-09 | 25 |
hepatobiliary system | 5.95e-09 | 25 |
foregut-midgut junction | 5.95e-09 | 25 |
septum transversum | 5.95e-09 | 25 |
sac | 1.20e-08 | 26 |
exocrine gland | 2.05e-07 | 31 |
exocrine system | 2.05e-07 | 31 |