FFCP PHASE1:Hg19::chr2:219433617..219433629,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:219433617..219433629,+
|short_description=p5@RQCD1
|description=CAGE_peak_5_at_RQCD1_5end
|association_with_transcript=19bp_to_ENST00000295701_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9125 | |EntrezGene=9125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10445 | |HGNC=10445 | ||
|TSSclassifier=strong | |||
|UniProt=B5MDQ4 | |UniProt=B5MDQ4 | ||
|association_with_transcript=19bp_to_ENST00000295701_5end | |||
|cluster_id=chr2:219433617..219433629,+ | |||
|coexpression_cluster_id=C4185 | |||
|description=CAGE_peak_5_at_RQCD1_5end | |||
|id=chr2:219433617..219433629,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.93e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.08e-07,10;CL:0000541,1.08e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.75e-13!235;DOID:14566!2.69e-12!239;DOID:0050687!4.43e-07!143;DOID:0050686!7.62e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.58e-10,235;DOID:14566,1.02e-09,239;DOID:0060058,2.55e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0005743!5.27e-08!86;UBERON:0001017!9.54e-08!82;UBERON:0000073!1.03e-07!94;UBERON:0001016!1.03e-07!94;UBERON:0001049!7.34e-07!57;UBERON:0005068!7.34e-07!57;UBERON:0006241!7.34e-07!57;UBERON:0007135!7.34e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@RQCD1 | |||
}} | }} |
Latest revision as of 17:50, 24 September 2015
Short description: | p5@RQCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RQCD1_5end |
Coexpression cluster: | C4185_teratocarcinoma_iPS_H9_HES3GFP_NK_diffuse_rhabdomyosarcoma |
Association with transcript: | 19bp_to_ENST00000295701_5end |
EntrezGene: | RQCD1 |
HGNC: | 10445 |
UniProt: | B5MDQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.08e-07 | 10 |
melanoblast | 1.08e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.58e-10 | 235 |
disease of cellular proliferation | 1.02e-09 | 239 |
lymphoma | 2.55e-07 | 10 |