FFCP PHASE1:Hg19::chr2:219850277..219850288,-: Difference between revisions
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|id=chr2:219850277..219850288,-
|short_description=p9@FEV
|description=CAGE_peak_9_at_FEV_5end
|association_with_transcript=90bp_to_ENST00000295727,NM_017521,uc002v...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54738 | |EntrezGene=54738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18562 | |HGNC=18562 | ||
|TSSclassifier=strong | |||
|UniProt=Q99581 | |UniProt=Q99581 | ||
|association_with_transcript=90bp_to_ENST00000295727,NM_017521,uc002vji.1_5end | |||
|cluster_id=chr2:219850277..219850288,- | |||
|coexpression_cluster_id=C732 | |||
|description=CAGE_peak_9_at_FEV_5end | |||
|id=chr2:219850277..219850288,- | |||
|ontology_enrichment_celltype=CL:0000242!1.37e-16!2;CL:0002553!3.58e-09!1;CL:0000312!3.77e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.14e-57;2!CL:0000242;4.14e-57;2!CL:0002553;1.54e-29;1!CL:0000312;1.36e-23;5!CL:0000240;7.48e-20;6!CL:0000311;7.48e-20;6!CL:0000079;7.48e-20;6!CL:0000237;7.48e-20;6!CL:0002535;2.05e-15;2!CL:0000362;1.35e-13;9!CL:0002159;4.29e-09;14!CL:0000333;5.08e-07;5!CL:0000095;6.10e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.58e-57,2;CL:0002553,1.33e-29,1;CL:0000312,1.28e-23,5;CL:0000240,7.13e-20,6;CL:0000311,7.13e-20,6;CL:0000079,7.13e-20,6;CL:0000237,7.13e-20,6;CL:0000036,7.13e-20,6;CL:0000357,7.13e-20,6;CL:0000114,7.13e-20,6;CL:0002535,2.05e-15,2;CL:0000362,1.31e-13,9;CL:0002159,4.21e-09,14;CL:0000095,6.01e-07,17;CL:0000123,6.01e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000357;7.48e-20;6!CL:0000114;7.48e-20;6 | |||
|ontology_enrichment_disease=DOID:171!2.50e-12!10;DOID:169!4.21e-12!6;DOID:225!1.78e-08!1;DOID:3095!2.08e-08!22;DOID:2994!2.08e-08!22;DOID:0050687!1.08e-07!143;DOID:4362!5.91e-07!5;DOID:162!7.17e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.36e-07,143;DOID:305,5.42e-07,106;DOID:4362,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001873!5.41e-16!2;UBERON:0010122!5.41e-16!2;UBERON:0000013!2.04e-14!5;UBERON:0002410!2.04e-14!5;UBERON:0005383!5.69e-11!3;UBERON:0005382!5.69e-11!3;UBERON:0000369!1.92e-08!4;UBERON:0002435!1.92e-08!4;UBERON:0000204!1.92e-08!4;UBERON:0010082!1.92e-08!4;UBERON:0000010!3.16e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0001003;1.50e-08;15!UBERON:0007376;1.50e-08;15!UBERON:0000013;5.08e-07;5!UBERON:0002410;5.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.05e-15,2;UBERON:0004801,2.05e-15,2;UBERON:0001003,1.47e-08,15;UBERON:0007376,1.47e-08,15;UBERON:0007383,1.47e-08,15;UBERON:0000013,5.08e-07,5;UBERON:0002410,5.08e-07,5 | |||
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|short_description=p9@FEV | |||
}} | }} |
Latest revision as of 19:12, 24 September 2015
Short description: | p9@FEV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FEV_5end |
Coexpression cluster: | C732_small_merkel_nonsmall_argyrophil_neuroblastoma_acute_carcinoid |
Association with transcript: | 90bp_to_ENST00000295727, NM_017521, uc002vji.1_5end |
EntrezGene: | FEV |
HGNC: | 18562 |
UniProt: | Q99581 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.58e-57 | 2 |
lung fibroblast | 1.33e-29 | 1 |
keratinocyte | 1.28e-23 | 5 |
stratified squamous epithelial cell | 7.13e-20 | 6 |
keratin accumulating cell | 7.13e-20 | 6 |
stratified epithelial cell | 7.13e-20 | 6 |
keratinizing barrier epithelial cell | 7.13e-20 | 6 |
epithelial fate stem cell | 7.13e-20 | 6 |
stratified epithelial stem cell | 7.13e-20 | 6 |
surface ectodermal cell | 7.13e-20 | 6 |
epithelial cell of cervix | 2.05e-15 | 2 |
epidermal cell | 1.31e-13 | 9 |
general ecto-epithelial cell | 4.21e-09 | 14 |
neuron associated cell | 6.01e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.01e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.05e-15 | 2 |
cervix epithelium | 2.05e-15 | 2 |
skin epidermis | 1.47e-08 | 15 |
outer epithelium | 1.47e-08 | 15 |
enveloping layer of ectoderm | 1.47e-08 | 15 |
sympathetic nervous system | 5.08e-07 | 5 |
autonomic nervous system | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.36e-07 | 143 |
carcinoma | 5.42e-07 | 106 |
cervical cancer | 6.04e-07 | 5 |