FFCP PHASE1:Hg19::chr2:220034719..220034742,-: Difference between revisions
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|id=chr2:220034719..220034742,-
|short_description=p1@SLC23A3
|description=CAGE_peak_1_at_SLC23A3_5end
|association_with_transcript=0bp_to_ENST00000409878,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151295 | |EntrezGene=151295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20601 | |HGNC=20601 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PIS1,C9JQ03 | |UniProt=Q6PIS1,C9JQ03 | ||
|association_with_transcript=0bp_to_ENST00000409878,ENST00000430764_5end | |||
|cluster_id=chr2:220034719..220034742,- | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_1_at_SLC23A3_5end | |||
|id=chr2:220034719..220034742,- | |||
|ontology_enrichment_celltype=CL:0002563!2.46e-09!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;7.72e-21;1!UBERON:0003918;6.28e-09;10!UBERON:0007687;6.28e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000059!3.70e-27!11;UBERON:0001155!2.26e-23!9;UBERON:0000160!4.05e-23!27;UBERON:0005409!1.07e-17!35;UBERON:0004907!1.16e-15!5;UBERON:0000344!3.88e-11!12;UBERON:0004921!4.44e-10!129;UBERON:0004185!4.44e-10!129;UBERON:0001154!8.17e-10!1;UBERON:0001153!8.17e-10!1;UBERON:0001242!2.46e-09!4;UBERON:0001262!2.46e-09!4;UBERON:0004786!2.46e-09!4;UBERON:0004808!2.46e-09!4;UBERON:0001277!2.46e-09!4;UBERON:0001007!2.56e-09!155;UBERON:0001555!2.56e-09!155;UBERON:0007026!2.56e-09!155;UBERON:0002372!2.67e-09!1;UBERON:0001961!2.67e-09!1;UBERON:0001744!2.67e-09!1;UBERON:0001735!2.67e-09!1;UBERON:0001052!2.79e-09!4;UBERON:0004119!2.48e-08!169;UBERON:0000925!2.48e-08!169;UBERON:0006595!2.48e-08!169;UBERON:0003350!1.23e-07!5;UBERON:0001046!3.49e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.80e-27;17!UBERON:0005409;1.46e-21;22!UBERON:0001154;7.72e-21;1!UBERON:0001153;7.72e-21;1!UBERON:0009854;7.72e-21;1!UBERON:0001155;2.41e-20;9!UBERON:0000059;8.80e-17;11!UBERON:0004921;2.57e-14;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.90e-27,17;UBERON:0001154,9.43e-21,1;UBERON:0001153,9.43e-21,1;UBERON:0001045,9.43e-21,1;UBERON:0001155,2.58e-20,9;UBERON:0005409,4.37e-19,25;UBERON:0000059,9.29e-17,11 | |||
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|short_description=p1@SLC23A3 | |||
}} | }} |
Latest revision as of 19:30, 24 September 2015
Short description: | p1@SLC23A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC23A3_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 0bp_to_ENST00000409878, ENST00000430764_5end |
EntrezGene: | SLC23A3 |
HGNC: | 20601 |
UniProt: | Q6PIS1C9JQ03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.90e-27 | 17 |
vermiform appendix | 9.43e-21 | 1 |
caecum | 9.43e-21 | 1 |
midgut | 9.43e-21 | 1 |
colon | 2.58e-20 | 9 |
gastrointestinal system | 4.37e-19 | 25 |
large intestine | 9.29e-17 | 11 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.82e-11 | 2 |