FFCP PHASE1:Mm9::chr11:94871698..94871733,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217125 | |EntrezGene=217125 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1312 | |MCL_coexpression_id=1312 | ||
|TSSclassifier=NA | |||
|UniProt=B7ZC59 | |UniProt=B7ZC59 | ||
|association_with_transcript=103bp_to_ENSMUST00000124735_5end | |association_with_transcript=103bp_to_ENSMUST00000124735_5end | ||
|cluster_id=chr11:94871698..94871733,+ | |||
|description=CAGE_peak_7_at_Samd14_5end | |description=CAGE_peak_7_at_Samd14_5end | ||
|id=chr11:94871698..94871733,+ | |id=chr11:94871698..94871733,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.22e-13!23;CL:0000337!1.22e-13!23;CL:0000540!3.49e-13!33;CL:0000047!3.49e-13!33;CL:0000031!3.49e-13!33;CL:0000404!3.49e-13!33;CL:0002319!5.88e-13!43;CL:0000221!7.65e-13!44;CL:0000133!7.65e-13!44;CL:0000393!2.71e-12!39;CL:0000211!2.71e-12!39;CL:0000055!1.16e-11!50 | |ontology_enrichment_celltype=CL:0000117!1.22e-13!23;CL:0000337!1.22e-13!23;CL:0000540!3.49e-13!33;CL:0000047!3.49e-13!33;CL:0000031!3.49e-13!33;CL:0000404!3.49e-13!33;CL:0002319!5.88e-13!43;CL:0000221!7.65e-13!44;CL:0000133!7.65e-13!44;CL:0000393!2.71e-12!39;CL:0000211!2.71e-12!39;CL:0000055!1.16e-11!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-17,23;CL:0000337,1.89e-17,23;CL:0000540,2.45e-15,33;CL:0000047,2.45e-15,33;CL:0000031,2.45e-15,33;CL:0000404,2.45e-15,33;CL:0002319,2.31e-14,43;CL:0000393,7.59e-14,39;CL:0000211,7.59e-14,39;CL:0000221,9.81e-14,44;CL:0000133,9.81e-14,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-15!73;UBERON:0005743!1.27e-15!73;UBERON:0000073!5.12e-15!75;UBERON:0001016!5.12e-15!75;UBERON:0002346!2.36e-14!71;UBERON:0003075!2.36e-14!71;UBERON:0007284!2.36e-14!71;UBERON:0004121!1.56e-13!102;UBERON:0000924!1.56e-13!102;UBERON:0006601!1.56e-13!102;UBERON:0001049!1.64e-12!52;UBERON:0005068!1.64e-12!52;UBERON:0006241!1.64e-12!52;UBERON:0007135!1.64e-12!52;UBERON:0000033!1.33e-11!63;UBERON:0003056!6.48e-11!49;UBERON:0002616!4.32e-10!49;UBERON:0000955!1.87e-09!50;UBERON:0006238!1.87e-09!50;UBERON:0003080!7.53e-08!40;UBERON:0002020!8.25e-08!34;UBERON:0002780!1.61e-07!39;UBERON:0001890!1.61e-07!39;UBERON:0006240!1.61e-07!39 | |ontology_enrichment_uberon=UBERON:0001017!1.27e-15!73;UBERON:0005743!1.27e-15!73;UBERON:0000073!5.12e-15!75;UBERON:0001016!5.12e-15!75;UBERON:0002346!2.36e-14!71;UBERON:0003075!2.36e-14!71;UBERON:0007284!2.36e-14!71;UBERON:0004121!1.56e-13!102;UBERON:0000924!1.56e-13!102;UBERON:0006601!1.56e-13!102;UBERON:0001049!1.64e-12!52;UBERON:0005068!1.64e-12!52;UBERON:0006241!1.64e-12!52;UBERON:0007135!1.64e-12!52;UBERON:0000033!1.33e-11!63;UBERON:0003056!6.48e-11!49;UBERON:0002616!4.32e-10!49;UBERON:0000955!1.87e-09!50;UBERON:0006238!1.87e-09!50;UBERON:0003080!7.53e-08!40;UBERON:0002020!8.25e-08!34;UBERON:0002780!1.61e-07!39;UBERON:0001890!1.61e-07!39;UBERON:0006240!1.61e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.00e-16,73;UBERON:0002346,6.25e-16,64;UBERON:0003075,6.25e-16,64;UBERON:0007284,6.25e-16,64;UBERON:0001016,9.17e-16,75;UBERON:0004121,8.65e-15,95;UBERON:0000924,8.65e-15,95;UBERON:0006601,8.65e-15,95;UBERON:0000073,1.34e-13,54;UBERON:0001049,4.30e-13,52;UBERON:0005068,4.30e-13,52;UBERON:0006241,4.30e-13,52;UBERON:0007135,4.30e-13,52;UBERON:0010371,1.15e-12,73;UBERON:0003056,6.63e-11,49;UBERON:0002616,2.36e-09,46;UBERON:0000955,6.34e-09,47;UBERON:0006238,6.34e-09,47;UBERON:0010314,4.68e-08,92;UBERON:0002020,6.78e-08,34;UBERON:0003080,1.14e-07,40;UBERON:0002780,2.85e-07,39;UBERON:0001890,2.85e-07,39;UBERON:0006240,2.85e-07,39;UBERON:0003076,3.11e-07,12;UBERON:0003057,3.11e-07,12 | |||
|phase1_expression=1.92178616525753,0.348975407639361,0.454999239389536,0,0,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0.999329285446988,4.45445588257617,14.6907994406911,0.157731082679119,0,0,0.935476191661768,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,1.90509202037889,1.84519436275371,0,0,0,0,0,0,0,0,0,0,1.1330713617802,2.33166941804883,1.10128051297009,3.12956537739216,0.436050312760893,3.29529274101708,0.777719596297134,1.1198913730029,0,0,0,0,0,0.573066879877513,0.515672092277442,9.71119012126069,11.6378015439847,10.1413024560989,0.677689064138264,0,0,0,0,2.39680088414724,4.61061966385865,4.04389488003063,5.94026128659439,5.67877395648731,5.99867067247988,6.62605622854841,5.63457676388789,7.47594673942244,8.27296907949019,1.10115880999389,2.042997409363,1.53606533256243,11.0784481693363,11.0700048758916,13.5437476344758,2.51264699101243,1.68828783009504,1.83357897332172,6.48182888042069,7.68807076315156,7.64237727883732,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,1.04091196059682,1.52232739156071,0.691846491768175,0,1.05829836422134,0,0.988779870937496,0,0.884610551949874,0.323533699894818,0.662524555381181,0,0,4.9772735491963,13.1951425292477,0,0,0.599902730993408,0,2.09706895166752,0.457500602818626,5.78010019719176,0.869121600961382,0.511430914660661,2.90903262383384,1.29793010454206,1.73126918545538,1.24406970610093,0,0.841767423545896,3.12289063110489,2.5289231487682,1.62055916824814,3.91832526372859,4.35433594568498,1.7935920839879,2.43624483855295,2.58703370739016,1.94011193639558,1.89106080167819,2.81521798662318,1.53437012699302,1.39023624612799,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.710234206755631,0,0,0,0,0.583826711835847,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0.841159794256509,5.04232600658494,0,0.264450566663544,1.2797295032114,0.928946687441754,0.644337306610467,1.21010114774006,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.19496408711912,0.898819408654221,0,0,1.51734320762465,0.685491075658373,0,0.203651327845314,0.775809948670503,1.05203729835478,0.505892296994058,0,0.156998727841375,0.493588655687202,0,2.8363667971736,4.32429789249047,2.47348323623339,3.24576194221605,1.4470629585145,1.78238096246994,1.43848068725405,5.83686816390127,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0,0,0,0.568474235311454,0.488894929326078,0.509235257325564,0,0,0,1.17080188714679,0.945810864637146,0.44292937929755,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.12385412991454,1.28932855251423,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,1.29254038639679,0.716906393857656,1.55959071857676,1.69845918473299,0.404810701674894,1.46127928955656,1.97643888973262,0,0.283880170416537,2.31485284767432,3.25773918707152,0.659880491890142,0,0.728341908464944,1.209294227859,0.377210159511796,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,1.02131881726136,0.720244376125241,2.97524972700335,1.07168517515796,1.59606210278046,2.31879462882692,1.81003922662333,2.43571959291679,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0.358117032009409,0,0.291480836629851,1.8542530201051,6.32222258952055,2.68302928352189,1.11116716421827,3.20226376907975,4.64760374251486,3.20289442489132,0,0,0,0,2.84702394223022,0.813277868507395,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,0.826534557253359,0,0.129614973291793,0,0,0.897099276263873,0.330916980914195,1.36115831840833,0.645799117388655,0.337912250981556,1.17357238645754,0.5208175393758,0.209718688851422,0.241584120826006,0,0,1.21635129174099,0.924398614483445,0.649604114888975,0.537080087002444,0.39736270956253,0,0,0,0.228620419965,0.201652370273681,0.292373642219257,0,0,0,0,0.0897138566094757,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0.501572104035363,1.6942555278512,0.460325236507177,2.29158205375759,0.515559547031063,0,0,0.675022500231806,0,0.453142408984205,0,1.3492355185943,4.38927360741134,3.92687293234509,1.94485373654635,4.61148957781561,2.75765262675021,1.11123363900808,1.44224540067226,1.92551525755089,0.505394423527595,2.28131369901216,1.88626341386076,1.03005658216871,1.53660365771686,1.09127391015665,1.42888107384922,1.97003354106254,1.73618298417335,0.824171801606613,1.76638704161277,1.71434626192708,0.70990322463735,2.14592570952589,1.74415699958794,1.2234219453993,0.592302255241736,0.914639864363863,0.526139422875686,1.22223702461276,1.68342681497322,1.18635018124174,1.0835493061312,0.409231043169689,1.23949472948773,1.35034627686799,2.99772693525535,1.87145286756327,1.07435527024149,3.06061331310149,1.10295709559758,0.231867835620421 | |phase1_expression=1.92178616525753,0.348975407639361,0.454999239389536,0,0,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0.999329285446988,4.45445588257617,14.6907994406911,0.157731082679119,0,0,0.935476191661768,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,1.90509202037889,1.84519436275371,0,0,0,0,0,0,0,0,0,0,1.1330713617802,2.33166941804883,1.10128051297009,3.12956537739216,0.436050312760893,3.29529274101708,0.777719596297134,1.1198913730029,0,0,0,0,0,0.573066879877513,0.515672092277442,9.71119012126069,11.6378015439847,10.1413024560989,0.677689064138264,0,0,0,0,2.39680088414724,4.61061966385865,4.04389488003063,5.94026128659439,5.67877395648731,5.99867067247988,6.62605622854841,5.63457676388789,7.47594673942244,8.27296907949019,1.10115880999389,2.042997409363,1.53606533256243,11.0784481693363,11.0700048758916,13.5437476344758,2.51264699101243,1.68828783009504,1.83357897332172,6.48182888042069,7.68807076315156,7.64237727883732,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,1.04091196059682,1.52232739156071,0.691846491768175,0,1.05829836422134,0,0.988779870937496,0,0.884610551949874,0.323533699894818,0.662524555381181,0,0,4.9772735491963,13.1951425292477,0,0,0.599902730993408,0,2.09706895166752,0.457500602818626,5.78010019719176,0.869121600961382,0.511430914660661,2.90903262383384,1.29793010454206,1.73126918545538,1.24406970610093,0,0.841767423545896,3.12289063110489,2.5289231487682,1.62055916824814,3.91832526372859,4.35433594568498,1.7935920839879,2.43624483855295,2.58703370739016,1.94011193639558,1.89106080167819,2.81521798662318,1.53437012699302,1.39023624612799,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.710234206755631,0,0,0,0,0.583826711835847,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0.841159794256509,5.04232600658494,0,0.264450566663544,1.2797295032114,0.928946687441754,0.644337306610467,1.21010114774006,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.19496408711912,0.898819408654221,0,0,1.51734320762465,0.685491075658373,0,0.203651327845314,0.775809948670503,1.05203729835478,0.505892296994058,0,0.156998727841375,0.493588655687202,0,2.8363667971736,4.32429789249047,2.47348323623339,3.24576194221605,1.4470629585145,1.78238096246994,1.43848068725405,5.83686816390127,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0,0,0,0.568474235311454,0.488894929326078,0.509235257325564,0,0,0,1.17080188714679,0.945810864637146,0.44292937929755,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.12385412991454,1.28932855251423,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,1.29254038639679,0.716906393857656,1.55959071857676,1.69845918473299,0.404810701674894,1.46127928955656,1.97643888973262,0,0.283880170416537,2.31485284767432,3.25773918707152,0.659880491890142,0,0.728341908464944,1.209294227859,0.377210159511796,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,1.02131881726136,0.720244376125241,2.97524972700335,1.07168517515796,1.59606210278046,2.31879462882692,1.81003922662333,2.43571959291679,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0.358117032009409,0,0.291480836629851,1.8542530201051,6.32222258952055,2.68302928352189,1.11116716421827,3.20226376907975,4.64760374251486,3.20289442489132,0,0,0,0,2.84702394223022,0.813277868507395,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,0.826534557253359,0,0.129614973291793,0,0,0.897099276263873,0.330916980914195,1.36115831840833,0.645799117388655,0.337912250981556,1.17357238645754,0.5208175393758,0.209718688851422,0.241584120826006,0,0,1.21635129174099,0.924398614483445,0.649604114888975,0.537080087002444,0.39736270956253,0,0,0,0.228620419965,0.201652370273681,0.292373642219257,0,0,0,0,0.0897138566094757,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0.501572104035363,1.6942555278512,0.460325236507177,2.29158205375759,0.515559547031063,0,0,0.675022500231806,0,0.453142408984205,0,1.3492355185943,4.38927360741134,3.92687293234509,1.94485373654635,4.61148957781561,2.75765262675021,1.11123363900808,1.44224540067226,1.92551525755089,0.505394423527595,2.28131369901216,1.88626341386076,1.03005658216871,1.53660365771686,1.09127391015665,1.42888107384922,1.97003354106254,1.73618298417335,0.824171801606613,1.76638704161277,1.71434626192708,0.70990322463735,2.14592570952589,1.74415699958794,1.2234219453993,0.592302255241736,0.914639864363863,0.526139422875686,1.22223702461276,1.68342681497322,1.18635018124174,1.0835493061312,0.409231043169689,1.23949472948773,1.35034627686799,2.99772693525535,1.87145286756327,1.07435527024149,3.06061331310149,1.10295709559758,0.231867835620421 | ||
|short_description=p7@Samd14 | |short_description=p7@Samd14 | ||
}} | }} |
Latest revision as of 00:33, 26 September 2015
Short description: | p7@Samd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Samd14_5end |
Coexpression cluster: | MCL_coexpression_mm9:1312 |
Association with transcript: | 103bp_to_ENSMUST00000124735_5end |
EntrezGene: | Samd14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.89e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.89e-17 | 23 |
neuron | 2.45e-15 | 33 |
neuronal stem cell | 2.45e-15 | 33 |
neuroblast | 2.45e-15 | 33 |
electrically signaling cell | 2.45e-15 | 33 |
neural cell | 2.31e-14 | 43 |
electrically responsive cell | 7.59e-14 | 39 |
electrically active cell | 7.59e-14 | 39 |
ectodermal cell | 9.81e-14 | 44 |
neurectodermal cell | 9.81e-14 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.00e-16 | 73 |
neurectoderm | 6.25e-16 | 64 |
neural plate | 6.25e-16 | 64 |
presumptive neural plate | 6.25e-16 | 64 |
nervous system | 9.17e-16 | 75 |
ectoderm-derived structure | 8.65e-15 | 95 |
ectoderm | 8.65e-15 | 95 |
presumptive ectoderm | 8.65e-15 | 95 |
regional part of nervous system | 1.34e-13 | 54 |
neural tube | 4.30e-13 | 52 |
neural rod | 4.30e-13 | 52 |
future spinal cord | 4.30e-13 | 52 |
neural keel | 4.30e-13 | 52 |
ecto-epithelium | 1.15e-12 | 73 |
pre-chordal neural plate | 6.63e-11 | 49 |
regional part of brain | 2.36e-09 | 46 |
brain | 6.34e-09 | 47 |
future brain | 6.34e-09 | 47 |
structure with developmental contribution from neural crest | 4.68e-08 | 92 |
gray matter | 6.78e-08 | 34 |
anterior neural tube | 1.14e-07 | 40 |
regional part of forebrain | 2.85e-07 | 39 |
forebrain | 2.85e-07 | 39 |
future forebrain | 2.85e-07 | 39 |
posterior neural tube | 3.11e-07 | 12 |
chordal neural plate | 3.11e-07 | 12 |