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FFCP PHASE1:Hg19::chr2:234580379..234580386,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:234580379..234580386,+
|DHSsupport=supported 
|short_description=p5@UGT1A9
|DPIdataset=robust
|description=CAGE_peak_5_at_UGT1A9_5end
|association_with_transcript=-112bp_to_ENST00000354728_5end
|EntrezGene=54600
|EntrezGene=54600
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=12541
|HGNC=12541
|TSSclassifier=strong
|UniProt=O60656
|UniProt=O60656
|association_with_transcript=-112bp_to_ENST00000354728_5end
|cluster_id=chr2:234580379..234580386,+
|coexpression_cluster_id=C5
|description=CAGE_peak_5_at_UGT1A9_5end
|id=chr2:234580379..234580386,+
|ontology_enrichment_celltype=CL:0000181!2.77e-09!12;CL:0000417!2.77e-09!12;CL:0000668!2.77e-09!12;CL:0000414!2.77e-09!12;CL:0000412!2.77e-09!12;CL:0000182!2.77e-09!12
|ontology_enrichment_celltype_v019=CL:0000182;5.08e-12;12
|ontology_enrichment_celltype_v019_2=CL:0000182,5.08e-12,12
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!3.00e-16!55;UBERON:0005173!3.00e-16!55;UBERON:0002417!1.15e-14!61;UBERON:0000916!1.15e-14!61;UBERON:0002107!1.84e-12!19;UBERON:0006925!1.84e-12!19;UBERON:0008836!1.84e-12!19;UBERON:0008835!7.41e-11!22;UBERON:0003894!7.41e-11!22;UBERON:0009854!2.05e-10!23;UBERON:0007499!1.24e-09!25;UBERON:0009497!1.24e-09!25;UBERON:0000015!1.24e-09!25;UBERON:0002423!1.24e-09!25;UBERON:0006235!1.24e-09!25;UBERON:0004161!1.24e-09!25;UBERON:0005057!2.75e-09!26;UBERON:0009856!2.75e-09!26;UBERON:0002113!7.33e-09!27;UBERON:0003918!7.33e-09!27;UBERON:0005095!7.33e-09!27;UBERON:0007687!7.33e-09!27;UBERON:0005177!2.14e-08!107;UBERON:0009569!5.97e-08!113;UBERON:0002365!6.85e-08!31;UBERON:0002330!6.85e-08!31;UBERON:0000489!1.42e-07!32;UBERON:0002368!4.68e-07!35
|ontology_enrichment_uberon_v019=UBERON:0002107;2.21e-16;19!UBERON:0006925;2.21e-16;19!UBERON:0002423;1.20e-12;25!UBERON:0002365;1.15e-10;31!UBERON:0002330;1.15e-10;31!UBERON:0005172;3.60e-09;52!UBERON:0005173;3.60e-09;52!UBERON:0002368;3.17e-08;33!UBERON:0000949;3.65e-07;43
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.39e-16,19;UBERON:0006925,2.39e-16,19;UBERON:0008836,2.39e-16,19;UBERON:0008835,3.13e-14,22;UBERON:0003894,3.13e-14,22;UBERON:0009854,1.20e-13,23;UBERON:0007499,1.28e-12,25;UBERON:0009497,1.28e-12,25;UBERON:0000015,1.28e-12,25;UBERON:0002423,1.28e-12,25;UBERON:0006235,1.28e-12,25;UBERON:0004161,1.28e-12,25;UBERON:0009856,3.64e-12,26;UBERON:0002365,2.52e-10,31;UBERON:0002330,2.52e-10,31;UBERON:0005172,2.58e-10,54;UBERON:0005173,2.58e-10,54;UBERON:0002417,2.45e-09,60;UBERON:0000916,2.45e-09,60;UBERON:0002368,3.15e-09,35;UBERON:0000949,2.49e-07,45
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|short_description=p5@UGT1A9
}}
}}

Latest revision as of 23:23, 15 September 2015

Short description:p5@UGT1A9
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_UGT1A9_5end
Coexpression cluster:C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas
Association with transcript: -112bp_to_ENST00000354728_5end
EntrezGene:UGT1A9
HGNC: 12541
UniProt: O60656
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data