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FFCP PHASE1:Mm9::chr18:36838795..36838822,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=225372
|EntrezGene=225372
|HGNC=
|HGNC=
|MCL_coexpression_id=2910
|MCL_coexpression_id=2910
|TSSclassifier=NA
|UniProt=Q8R1C9,Q3UR23
|UniProt=Q8R1C9,Q3UR23
|association_with_transcript=197bp_to_ENSMUST00000001415,NM_146085,uc008enz.1_5end
|association_with_transcript=197bp_to_ENSMUST00000001415,NM_146085,uc008enz.1_5end
|cluster_id=chr18:36838795..36838822,-
|description=CAGE_peak_6_at_Apbb3_5end
|description=CAGE_peak_6_at_Apbb3_5end
|id=chr18:36838795..36838822,-
|id=chr18:36838795..36838822,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,2.97e-08,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!6.28e-08!50;UBERON:0006238!6.28e-08!50;UBERON:0001017!8.21e-08!73;UBERON:0005743!8.21e-08!73;UBERON:0002616!1.43e-07!49;UBERON:0000073!1.65e-07!75;UBERON:0001016!1.65e-07!75;UBERON:0001049!2.21e-07!52;UBERON:0005068!2.21e-07!52;UBERON:0006241!2.21e-07!52;UBERON:0007135!2.21e-07!52
|ontology_enrichment_uberon=UBERON:0000955!6.28e-08!50;UBERON:0006238!6.28e-08!50;UBERON:0001017!8.21e-08!73;UBERON:0005743!8.21e-08!73;UBERON:0002616!1.43e-07!49;UBERON:0000073!1.65e-07!75;UBERON:0001016!1.65e-07!75;UBERON:0001049!2.21e-07!52;UBERON:0005068!2.21e-07!52;UBERON:0006241!2.21e-07!52;UBERON:0007135!2.21e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-13,54;UBERON:0000955,3.92e-12,47;UBERON:0006238,3.92e-12,47;UBERON:0001017,9.22e-12,73;UBERON:0001049,1.55e-11,52;UBERON:0005068,1.55e-11,52;UBERON:0006241,1.55e-11,52;UBERON:0007135,1.55e-11,52;UBERON:0002616,2.11e-11,46;UBERON:0001016,3.19e-11,75;UBERON:0002021,1.63e-09,10;UBERON:0000411,1.63e-09,10;UBERON:0001950,1.63e-09,10;UBERON:0002346,4.01e-08,64;UBERON:0003075,4.01e-08,64;UBERON:0007284,4.01e-08,64;UBERON:0004121,7.41e-08,95;UBERON:0000924,7.41e-08,95;UBERON:0006601,7.41e-08,95;UBERON:0003080,1.00e-07,40;UBERON:0010371,4.45e-07,73;UBERON:0002780,5.85e-07,39;UBERON:0001890,5.85e-07,39;UBERON:0006240,5.85e-07,39
|phase1_expression=1.76163731815273,3.48975407639361,4.54999239389536,11.7961042409664,13.5241847085514,0.33575854382378,0.233612640595526,0.387369970324729,0.140788722151667,0.468129052643987,0,0,0.171200729931206,0,0,0.607425802169478,0.699561878128147,0,0.137114433605739,0,0.595303031057488,0.198581902401771,0,0.799962113967033,0.45881856213434,3.44539178469012,2.58457197695445,0.646413698057667,0.760093677825496,0,0,0.635030673459631,0,0,0,0,0.408338712524738,0,0,0.523523743973798,0,0,0,0.629484089877886,0.304130793658544,0.734187008646726,2.34717403304412,0.218025156380447,0.659058548203415,0.972149495371417,0.699932108126813,0,0,0,0.672187598284928,0,0,0.515672092277442,0.202316460859598,0,0,0,1.77858959222228,0.449949858640699,0,0.7104801149461,0.599200221036809,1.92109152660777,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,1.98781686856452,0,0.191690942036473,0.919218786610021,3.30347642998166,3.57524546638526,2.76491759861238,0.263772575460388,0.548925861614458,0.52091337055676,1.67509799400829,1.12552522006336,1.98637722109853,0.883885756421003,0.711858403995515,0.186399445825301,0.151452386666368,0.302286240427142,1.73918693221007,0.860423876981386,10.879541339324,0,3.89865850468601,1.79210754838934,0.561777680527007,0.852151612890289,0.519572009205738,0.70667914902068,0.14084341977668,1.28326477414318,5.09610479413291,0,0.432982082022428,0.253359865475099,0.505524445014783,2.2836775943812,0,2.52351636410202,0.173485326766136,0.304465478312141,0,0.452167921657868,0.823120949949934,0.376999773989026,1.73036477414062,0.433798070759735,0.884610551949874,0,0,0.484875253135222,0,2.92780797011547,1.25668024088073,1.02182822083437,0.479260498023681,0,0.254140454146129,2.39665023047716,0,0.502617408451458,1.56441888173049,2.04572365864264,1.87009240103604,3.0825839982874,0.407357455401265,0.248813941220186,1.0108910337347,0.420883711772948,0.260240885925407,0.459804208866946,0,0.150704817835715,0.272145996605311,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.657587197282725,0,0,0,0.199034266818493,0,0.51469581422943,0.568326998791185,0.414251545071004,0.469052119962192,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.583826711835847,0.16455984991348,0,0.162137619091711,0.438599962275997,0.439100230582101,0.402619256281115,2.3131894342054,0.102904612379284,1.32167513193519,1.05780226665418,0,0.464473343720877,0,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.246794327843601,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.763877555344259,0.863088412352432,1.45921704097532,0,0,0,0.312037673114561,0.757736633841335,0.717589654087649,0.482443521363367,0.184753190166605,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,1.50791283939272,1.08781136763742,0,0,2.0871576698413,2.10981035865966,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,1.28528526568723,0.851640511249612,0,0.325773918707152,0.164970122972535,2.65490276679926,0,0,0.377210159511796,1.47650946440386,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,1.522324745573,0.469343416127421,0.21183207086382,0.661585194164886,0.49465875882444,0.161464426695906,0.241251699712623,0.238744688006273,0,0,1.66882771809459,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.404593039154462,0.578574190077352,0,0.388844919875379,0,0.56369293868419,0,0.496375471371293,0.583353565032143,0.258319646955462,0.844780627453891,0.469428954583016,0.2604087696879,0.104859344425711,0.483168241652012,0.864090018773596,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,1.12609485270709,0.73260649706906,0.214368379079066,1.50471631210609,2.82375921308533,0,2.29158205375759,3.43706364687375,0,5.2877572817279,2.70009000092722,2.70192721934532,4.07828168085784,1.55328093525546,0,0,0.170733605754134,0,0,0.367687016900028,0.44449345560323,1.03017528619447,0,0,1.01391719956096,0.377252682772152,0.655490552289177,0.448176066834085,0.516919220600519,1.42888107384922,0.579421629724277,0.77163688185482,1.23625770240992,0.588795680537589,0,0.70990322463735,0,0.436039249896986,0.564656282491984,0.423073039458382,0.548783918618318,0.526139422875686,0.814824683075171,1.12228454331548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|phase1_expression=1.76163731815273,3.48975407639361,4.54999239389536,11.7961042409664,13.5241847085514,0.33575854382378,0.233612640595526,0.387369970324729,0.140788722151667,0.468129052643987,0,0,0.171200729931206,0,0,0.607425802169478,0.699561878128147,0,0.137114433605739,0,0.595303031057488,0.198581902401771,0,0.799962113967033,0.45881856213434,3.44539178469012,2.58457197695445,0.646413698057667,0.760093677825496,0,0,0.635030673459631,0,0,0,0,0.408338712524738,0,0,0.523523743973798,0,0,0,0.629484089877886,0.304130793658544,0.734187008646726,2.34717403304412,0.218025156380447,0.659058548203415,0.972149495371417,0.699932108126813,0,0,0,0.672187598284928,0,0,0.515672092277442,0.202316460859598,0,0,0,1.77858959222228,0.449949858640699,0,0.7104801149461,0.599200221036809,1.92109152660777,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,1.98781686856452,0,0.191690942036473,0.919218786610021,3.30347642998166,3.57524546638526,2.76491759861238,0.263772575460388,0.548925861614458,0.52091337055676,1.67509799400829,1.12552522006336,1.98637722109853,0.883885756421003,0.711858403995515,0.186399445825301,0.151452386666368,0.302286240427142,1.73918693221007,0.860423876981386,10.879541339324,0,3.89865850468601,1.79210754838934,0.561777680527007,0.852151612890289,0.519572009205738,0.70667914902068,0.14084341977668,1.28326477414318,5.09610479413291,0,0.432982082022428,0.253359865475099,0.505524445014783,2.2836775943812,0,2.52351636410202,0.173485326766136,0.304465478312141,0,0.452167921657868,0.823120949949934,0.376999773989026,1.73036477414062,0.433798070759735,0.884610551949874,0,0,0.484875253135222,0,2.92780797011547,1.25668024088073,1.02182822083437,0.479260498023681,0,0.254140454146129,2.39665023047716,0,0.502617408451458,1.56441888173049,2.04572365864264,1.87009240103604,3.0825839982874,0.407357455401265,0.248813941220186,1.0108910337347,0.420883711772948,0.260240885925407,0.459804208866946,0,0.150704817835715,0.272145996605311,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.657587197282725,0,0,0,0.199034266818493,0,0.51469581422943,0.568326998791185,0.414251545071004,0.469052119962192,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.583826711835847,0.16455984991348,0,0.162137619091711,0.438599962275997,0.439100230582101,0.402619256281115,2.3131894342054,0.102904612379284,1.32167513193519,1.05780226665418,0,0.464473343720877,0,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.246794327843601,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.763877555344259,0.863088412352432,1.45921704097532,0,0,0,0.312037673114561,0.757736633841335,0.717589654087649,0.482443521363367,0.184753190166605,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,1.50791283939272,1.08781136763742,0,0,2.0871576698413,2.10981035865966,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,1.28528526568723,0.851640511249612,0,0.325773918707152,0.164970122972535,2.65490276679926,0,0,0.377210159511796,1.47650946440386,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,1.522324745573,0.469343416127421,0.21183207086382,0.661585194164886,0.49465875882444,0.161464426695906,0.241251699712623,0.238744688006273,0,0,1.66882771809459,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.404593039154462,0.578574190077352,0,0.388844919875379,0,0.56369293868419,0,0.496375471371293,0.583353565032143,0.258319646955462,0.844780627453891,0.469428954583016,0.2604087696879,0.104859344425711,0.483168241652012,0.864090018773596,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,1.12609485270709,0.73260649706906,0.214368379079066,1.50471631210609,2.82375921308533,0,2.29158205375759,3.43706364687375,0,5.2877572817279,2.70009000092722,2.70192721934532,4.07828168085784,1.55328093525546,0,0,0.170733605754134,0,0,0.367687016900028,0.44449345560323,1.03017528619447,0,0,1.01391719956096,0.377252682772152,0.655490552289177,0.448176066834085,0.516919220600519,1.42888107384922,0.579421629724277,0.77163688185482,1.23625770240992,0.588795680537589,0,0.70990322463735,0,0.436039249896986,0.564656282491984,0.423073039458382,0.548783918618318,0.526139422875686,0.814824683075171,1.12228454331548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|short_description=p6@Apbb3
|short_description=p6@Apbb3
}}
}}

Latest revision as of 05:25, 27 September 2015

Short description:p6@Apbb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Apbb3_5end
Coexpression cluster:MCL_coexpression_mm9:2910
Association with transcript: 197bp_to_ENSMUST00000001415, NM_146085, uc008enz.1_5end
EntrezGene:Apbb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Apbb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.80
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell2.97e-0825

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.20e-1354
brain3.92e-1247
future brain3.92e-1247
central nervous system9.22e-1273
neural tube1.55e-1152
neural rod1.55e-1152
future spinal cord1.55e-1152
neural keel1.55e-1152
regional part of brain2.11e-1146
nervous system3.19e-1175
occipital lobe1.63e-0910
visual cortex1.63e-0910
neocortex1.63e-0910
neurectoderm4.01e-0864
neural plate4.01e-0864
presumptive neural plate4.01e-0864
ectoderm-derived structure7.41e-0895
ectoderm7.41e-0895
presumptive ectoderm7.41e-0895
anterior neural tube1.00e-0740
ecto-epithelium4.45e-0773
regional part of forebrain5.85e-0739
forebrain5.85e-0739
future forebrain5.85e-0739
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