FFCP PHASE1:Hg19::chr2:238343455..238343486,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:238343455..238343486,-
|short_description=p1@ENST00000409910
|description=CAGE_peak_1_at_ENST00000409910_5end
|association_with_transcript=0bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000409910_5end | |||
|cluster_id=chr2:238343455..238343486,- | |||
|coexpression_cluster_id=C1774 | |||
|description=CAGE_peak_1_at_ENST00000409910_5end | |||
|id=chr2:238343455..238343486,- | |||
|ontology_enrichment_celltype=CL:0000055!1.53e-30!180;CL:0000057!2.63e-16!75;CL:0000183!5.85e-12!59;CL:0000680!8.32e-12!57;CL:0000056!8.32e-12!57;CL:0000355!8.32e-12!57;CL:0002371!1.34e-11!591;CL:0000048!1.40e-11!430;CL:0000723!8.22e-11!436;CL:0000034!1.40e-10!444;CL:0000144!1.43e-10!625;CL:0000187!4.24e-10!54;CL:0000393!3.34e-08!60;CL:0000211!3.34e-08!60;CL:0000192!7.04e-07!42;CL:0000514!7.04e-07!42;CL:0000188!9.29e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000723;3.00e-09;61!CL:0000048;5.18e-09;58!CL:0000134;6.98e-09;55!CL:0000188;1.86e-08;9!CL:0000680;4.83e-08;7!CL:0002334;6.12e-08;12!CL:0000034;7.36e-08;69!CL:0002620;9.73e-08;23!CL:0000057;2.06e-07;73!CL:0002320;2.77e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.46e-16,76;CL:0000048,3.13e-15,427;CL:0000723,2.17e-14,433;CL:0000034,1.10e-13,441;CL:0000680,2.42e-09,58;CL:0000056,2.42e-09,58;CL:0000355,2.42e-09,58;CL:0000188,1.45e-08,9;CL:0002320,4.61e-08,361;CL:0002334,7.35e-08,12;CL:0002620,9.72e-08,23;CL:0000187,1.59e-07,55;CL:0000134,4.05e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.51e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.00e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.89e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.38e-11!83;UBERON:0002329!2.38e-11!83;UBERON:0003077!2.38e-11!83;UBERON:0003059!2.38e-11!83;UBERON:0007282!2.38e-11!83;UBERON:0009618!2.38e-11!83;UBERON:0007285!2.38e-11!83;UBERON:0001134!2.75e-10!61;UBERON:0002036!2.75e-10!61;UBERON:0003082!2.75e-10!61;UBERON:0004290!3.32e-10!70;UBERON:0002385!1.99e-09!63;UBERON:0001015!1.99e-09!63;UBERON:0000383!1.99e-09!63;UBERON:0005256!2.28e-09!143;UBERON:0000486!1.44e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;6.35e-08;11!UBERON:0001134;1.38e-07;16!UBERON:0002036;1.38e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.07e-09,78;UBERON:0002384,8.89e-09,371;UBERON:0001134,4.32e-08,62;UBERON:0002036,4.32e-08,62;UBERON:0003082,4.32e-08,62;UBERON:0002329,4.75e-08,71;UBERON:0003059,4.75e-08,71;UBERON:0007282,4.75e-08,71;UBERON:0004290,4.75e-08,71;UBERON:0009618,4.75e-08,71;UBERON:0003077,8.60e-08,72;UBERON:0007285,8.60e-08,72;UBERON:0006876,8.85e-08,11;UBERON:0007524,1.53e-07,73;UBERON:0002385,1.55e-07,64;UBERON:0001015,1.55e-07,64;UBERON:0000383,1.55e-07,64 | |||
|phase1_expression=5.26867299884614,1.49870366723688,0.422863212287913,5.00366491765652,0.446961094427288,0.872338524100369,2.53299878168311,22.1101955699391,0,0.491467873003018,0,0.218441372130172,3.4289707169699,1.73272894144065,0.994192127183747,0.672325146451775,0.602694528023977,2.19093027116212,0.975865597581014,7.75662665883764,5.91602004608334,0.940364164434263,0.572471974262113,2.05311637609326,2.00868223351684,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0.590129310341499,0,0,0,0,0,0,0,0.294605907474837,0.443067789167242,0.812411591295047,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0.637130828648193,0.651083453856419,1.90090408889675,0.752875595388864,1.15187950038977,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0.639312809217652,1.0843174571537,1.00267582127178,0.579386075843295,205.183774339184,5.35298357332899,10.3988298880475,18.8469987843179,9.48615685485761,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,1.77883131343355,5.69025041699939,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0.379891534993739,0,2.29469296599051,1.06400514659507,2.80338800071154,3.20246987189115,18.2533985828698,5.91300967259556,13.6057778790385,5.5577047058576,17.2547467515222,13.82822218752,0.468642863667593,0.312160076830321,0,0.149448680551801,2.23125547423153,1.61872944368132,2.10676210053373,0.408308342509787,0.122834317311768,0.103325781175765,1.18800285728205,0.989067717114227,3.64064544775211,5.03032699271367,0.168336113954066,0.250237039743928,0.554128230968366,2.63386572528503,4.59731693698529,1.80285670687916,11.1163539496821,34.6221996879504,3.41691822109708,4.23863802319124,15.0045548042201,4.225153698776,10.8209026819164,8.00302482225836,8.60759294430458,6.8205903612839,6.31084435610286,2.57739716198438,0,39.0510551768276,14.7098063412355,12.8866050155971,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,8.28809528114883,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,30.8531902367581,2.8810180793198,7.3504355692771,0,0,0.590789906681404,7.50487269004906,0,7.72055146343365,0,0,0,0,0,1.03993478527958,4.3299402607582,0,33.8137039399166,0.866198686566443,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.253991577168676,0,0,0,0.925447434329912,0.300343057843917,0,14.5770409648969,1.30788020649984,28.4552548985286,41.2376773267311,0,65.933614699368,9.57377219705534,4.16029747645464,39.6099356363699,5.67396528093113,32.237083660948,0.57191197463259,3.7983512377401,18.1112874091769,68.7303348859781,0,14.2551337128017,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,3.59437283237374,0,101.27220257891,30.5488557068592,144.44985475292,67.5059831414406,0,0,0.215627574859517,0,4.57370323600434,3.90419561572865,0,1.67516265334349,0,0,0,0,0.613457458595699,3.50119364741774,1.62759014219841,1.03985430765404,0.356857977594324,0.315404830067869,8.31704046448264,25.8813645765838,29.562975527278,4.1389228517002,45.8315662989451,27.8397444497972,0.695068915744663,9.59425671567429,7.89229874764969,0.620304078368662,0,0.213455115606889,0,0,1.20956117331872,2.72918588600655,10.7423381301644,3.08726103876381,1.15325234330131,7.16390148693385,3.05622450172854,1.48418066444991,12.3367755042124,21.3074070375752,3.44934055257998,2.59627214591811,4.06736324609857,0,0.802025881213139,0,5.1666501674073,5.64482620820823,0.655622074797121,3.15839729035188,5.08301224889137,2.35304930753057,0,14.0383666427525,1.13733384070897,0.170093705276516,22.6711711907246,6.16909010761157,34.1392511305255,9.03041592938736,0.254876273045038,2.49322802678617,0.447749509444357,0,0,0.512900250232778,1.31205858279882,1.30151357865721,0.309123034943167,0,0.330037999682352,1.14853107599234,2.60024098414608,0,1.7400729292582,11.3995976664837,11.5127756044597,17.5052447055354,14.7165735469535,8.84601832876794,10.9090083092609,18.0735032362877,0,0,1.53135254993501,0.4046311234222,0.929691098594572,17.9443037693465,0.6970372701606,0,0.532306030317022,8.69932992075073,0.18532421910392,0.286249773483982,3.34942532423701,3.16379424718726,1.14378116354295,0.767693373934002,1.28381696410176,1.27281299170375,0,4.31693898199955,3.0199073270966,3.65218447271628,0.404364963146632,1.58510321173008,1.26377536871694,0.48763373908959,0.243713489631284,0,12.0119922039027,1.41405431953713,0,2.2054613741845,0,0,0.578775534266688,1.9676842561399,1.42037263873893,1.8589409885985,5.35221644811259,5.30622003154991,4.71595396862982,4.280052617775,5.32141596105897,0,0.329294892959902,1.13841952129715,1.39973888097993,0,0,0,0,0,0,0.886860307073351,3.44585100310439,3.04468565539302,1.52927441428475,0.569647187174163,1.90585420366231,2.46817363851717,3.24236655596359,0,1.58625035258854,0,0,0,0,0,1.28055318027145,0,0.798317485731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| ||
|short_description=p1@ENST00000409910 | |||
}} | }} |
Latest revision as of 08:12, 29 July 2015
Short description: | p1@ENST00000409910 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000409910_5end |
Coexpression cluster: | C1774_osteosarcoma_Chondrocyte_anaplastic_fibrosarcoma_Myoblast_ductal_osteoclastoma |
Association with transcript: | 0bp_to_ENST00000409910_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.46e-16 | 76 |
multi fate stem cell | 3.13e-15 | 427 |
somatic stem cell | 2.17e-14 | 433 |
stem cell | 1.10e-13 | 441 |
muscle precursor cell | 2.42e-09 | 58 |
myoblast | 2.42e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.42e-09 | 58 |
cell of skeletal muscle | 1.45e-08 | 9 |
connective tissue cell | 4.61e-08 | 361 |
preadipocyte | 7.35e-08 | 12 |
skin fibroblast | 9.72e-08 | 23 |
muscle cell | 1.59e-07 | 55 |
mesenchymal cell | 4.05e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.07e-09 | 78 |
connective tissue | 8.89e-09 | 371 |
skeletal muscle tissue | 4.32e-08 | 62 |
striated muscle tissue | 4.32e-08 | 62 |
myotome | 4.32e-08 | 62 |
somite | 4.75e-08 | 71 |
presomitic mesoderm | 4.75e-08 | 71 |
presumptive segmental plate | 4.75e-08 | 71 |
dermomyotome | 4.75e-08 | 71 |
trunk paraxial mesoderm | 4.75e-08 | 71 |
paraxial mesoderm | 8.60e-08 | 72 |
presumptive paraxial mesoderm | 8.60e-08 | 72 |
vasculature of organ | 8.85e-08 | 11 |
dense mesenchyme tissue | 1.53e-07 | 73 |
muscle tissue | 1.55e-07 | 64 |
musculature | 1.55e-07 | 64 |
musculature of body | 1.55e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.89e-11 | 14 |