FFCP PHASE1:Mm9::chr8:11354318..11354330,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=333 | |MCL_coexpression_id=333 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11354318..11354330,+ | |||
|description=CAGE_peak_at_chr8:11354318..11354330,+ | |description=CAGE_peak_at_chr8:11354318..11354330,+ | ||
|id=chr8:11354318..11354330,+ | |id=chr8:11354318..11354330,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.34e-15,8;CL:0000128,1.80e-14,6;CL:0000126,1.80e-14,6;CL:0000127,1.80e-14,6;CL:0000333,3.64e-12,10;CL:0000095,3.64e-12,10;CL:0000243,3.64e-12,10;CL:0000123,3.64e-12,10;CL:0000125,3.64e-12,10;CL:0000030,3.64e-12,10;CL:0000339,3.64e-12,10;CL:0002494,6.51e-12,3;CL:0000737,6.51e-12,3;CL:0000746,6.51e-12,3;CL:0000513,6.51e-12,3;CL:0002603,7.82e-08,2;CL:0000708,9.13e-08,2;CL:0002321,6.77e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.00e-08!18;UBERON:0000948!8.00e-08!18;UBERON:0005498!8.00e-08!18;UBERON:0004140!8.00e-08!18;UBERON:0009881!8.00e-08!18;UBERON:0004141!8.00e-08!18;UBERON:0003084!8.00e-08!18;UBERON:0007005!8.00e-08!18;UBERON:0004139!8.00e-08!18;UBERON:0004291!8.00e-08!18;UBERON:0004535!8.15e-07!23;UBERON:0001009!8.15e-07!23 | |ontology_enrichment_uberon=UBERON:0007100!8.00e-08!18;UBERON:0000948!8.00e-08!18;UBERON:0005498!8.00e-08!18;UBERON:0004140!8.00e-08!18;UBERON:0009881!8.00e-08!18;UBERON:0004141!8.00e-08!18;UBERON:0003084!8.00e-08!18;UBERON:0007005!8.00e-08!18;UBERON:0004139!8.00e-08!18;UBERON:0004291!8.00e-08!18;UBERON:0004535!8.15e-07!23;UBERON:0001009!8.15e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,9.13e-08,2 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,2.34717403304412,1.52617609466313,0,2.52758868796568,2.65974201088189,1.43752564364972,0,0,0,13.3774906738692,9.74213695791773,15.4701627683233,0,1.05798195854407,0,1.69422266034566,1.77858959222228,0,0,0.7104801149461,2.39680088414724,0,0.414758449233911,0.945041568321835,0,1.42825492201902,0.220868540951614,0.122490799214954,0.383381884072945,0,0,0,0,0,1.00636407962651,0.52091337055676,0.279182999001381,0,0.30559649555362,0.883885756421003,1.13897344639282,0.186399445825301,0.302904773332736,0,0.579728977403356,0,0,0,0,0,0,0,0.779358013808606,0.70667914902068,0.281686839553361,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0,0.452167921657868,0.705532242814229,0.753999547978053,0.741584903203122,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.509196819251581,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.828503090142008,0.469052119962192,0.720248245844059,0.473489471170421,0.393528463494808,0.308534225774757,0.930135779001631,1.87791380979733,0.700592054203017,0.493679549740441,0.164167464079095,0.405344047729279,0.730999937126662,0.439100230582101,0.268412837520744,0,0.102904612379284,0,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,0,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.841629838683823,0.69560190836683,0.147610147979602,0.470996183524124,0.493588655687202,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0.167506257441816,1.42826184531608,1.17080188714679,0,2.21464689648775,0.956728611944923,0.81931657357869,1.03610989119537,1.73578870297814,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.35613120733451,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.535106452806212,0.164549020602121,0,0.469343416127421,1.0591603543191,0.220528398054962,0,0.484393280087717,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,0,0.170870880797853,0,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0,0.655087691238533,0,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0,0.496375471371293,0.194451188344048,0.516639293910924,0.844780627453891,0.352071715937262,0.781226309063701,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.0974578807397524,0,0,0,0.443971906748129,0.538283139656854,0.671538465456314,0,0.187682475451182,0.183151624267265,0,0,0,0.920650473014354,0.572895513439397,0,0,0,0,1.35096360967266,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.468207537349412,0.320125762024346,0.114870937911227,0,0,1.15745532278223,0.412085900803307,1.32479028120958,0.685738504770831,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.814824683075171,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.771626443924566,0,0.467863216890817,0,0.57386499620653,1.76473135295612,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,2.34717403304412,1.52617609466313,0,2.52758868796568,2.65974201088189,1.43752564364972,0,0,0,13.3774906738692,9.74213695791773,15.4701627683233,0,1.05798195854407,0,1.69422266034566,1.77858959222228,0,0,0.7104801149461,2.39680088414724,0,0.414758449233911,0.945041568321835,0,1.42825492201902,0.220868540951614,0.122490799214954,0.383381884072945,0,0,0,0,0,1.00636407962651,0.52091337055676,0.279182999001381,0,0.30559649555362,0.883885756421003,1.13897344639282,0.186399445825301,0.302904773332736,0,0.579728977403356,0,0,0,0,0,0,0,0.779358013808606,0.70667914902068,0.281686839553361,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0,0.452167921657868,0.705532242814229,0.753999547978053,0.741584903203122,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.509196819251581,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.828503090142008,0.469052119962192,0.720248245844059,0.473489471170421,0.393528463494808,0.308534225774757,0.930135779001631,1.87791380979733,0.700592054203017,0.493679549740441,0.164167464079095,0.405344047729279,0.730999937126662,0.439100230582101,0.268412837520744,0,0.102904612379284,0,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,0,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.841629838683823,0.69560190836683,0.147610147979602,0.470996183524124,0.493588655687202,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0.167506257441816,1.42826184531608,1.17080188714679,0,2.21464689648775,0.956728611944923,0.81931657357869,1.03610989119537,1.73578870297814,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.35613120733451,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.535106452806212,0.164549020602121,0,0.469343416127421,1.0591603543191,0.220528398054962,0,0.484393280087717,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,0,0.170870880797853,0,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0,0.655087691238533,0,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0,0.496375471371293,0.194451188344048,0.516639293910924,0.844780627453891,0.352071715937262,0.781226309063701,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.0974578807397524,0,0,0,0.443971906748129,0.538283139656854,0.671538465456314,0,0.187682475451182,0.183151624267265,0,0,0,0.920650473014354,0.572895513439397,0,0,0,0,1.35096360967266,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.468207537349412,0.320125762024346,0.114870937911227,0,0,1.15745532278223,0.412085900803307,1.32479028120958,0.685738504770831,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.814824683075171,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.771626443924566,0,0.467863216890817,0,0.57386499620653,1.76473135295612,0.231867835620421 | ||
|short_description=p@chr8:11354318..11354330,+ | |short_description=p@chr8:11354318..11354330,+ | ||
}} | }} |
Latest revision as of 22:21, 5 August 2015
Short description: | p@chr8:11354318..11354330, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:11354318..11354330, + |
Coexpression cluster: | MCL_coexpression_mm9:333 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.34e-15 | 8 |
oligodendrocyte | 1.80e-14 | 6 |
macroglial cell | 1.80e-14 | 6 |
astrocyte | 1.80e-14 | 6 |
migratory neural crest cell | 3.64e-12 | 10 |
neuron associated cell | 3.64e-12 | 10 |
glial cell (sensu Vertebrata) | 3.64e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 3.64e-12 | 10 |
glial cell | 3.64e-12 | 10 |
glioblast | 3.64e-12 | 10 |
glioblast (sensu Vertebrata) | 3.64e-12 | 10 |
cardiocyte | 6.51e-12 | 3 |
striated muscle cell | 6.51e-12 | 3 |
cardiac muscle cell | 6.51e-12 | 3 |
cardiac muscle myoblast | 6.51e-12 | 3 |
astrocyte of the cerebellum | 7.82e-08 | 2 |
leptomeningeal cell | 9.13e-08 | 2 |
embryonic cell | 6.77e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 9.13e-08 | 2 |