FFCP PHASE1:Mm9::chr18:66098702..66098742,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19434 | |EntrezGene=19434 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=133 | |MCL_coexpression_id=133 | ||
|TSSclassifier=NA | |||
|UniProt=O35602 | |UniProt=O35602 | ||
|association_with_transcript=0bp_to_ENSMUST00000025396,NM_013833,uc008ffl.1_5end | |association_with_transcript=0bp_to_ENSMUST00000025396,NM_013833,uc008ffl.1_5end | ||
|cluster_id=chr18:66098702..66098742,- | |||
|description=CAGE_peak_1_at_Rax_5end | |description=CAGE_peak_1_at_Rax_5end | ||
|id=chr18:66098702..66098742,- | |id=chr18:66098702..66098742,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.15e-14!9;UBERON:0000019!3.15e-14!9;UBERON:0000047!3.15e-14!9;UBERON:0004088!3.15e-14!9;UBERON:0002104!3.15e-14!9;UBERON:0001456!3.15e-14!9;UBERON:0003072!3.15e-14!9;UBERON:0003071!3.15e-14!9;UBERON:0004128!3.15e-14!9;UBERON:0000007!5.45e-12!8;UBERON:0003296!5.45e-12!8;UBERON:0010133!5.45e-12!8;UBERON:0001444!3.71e-11!11;UBERON:0000020!5.20e-10!12;UBERON:0001032!5.20e-10!12;UBERON:0004456!5.20e-10!12;UBERON:0003056!6.66e-10!49;UBERON:0001894!3.57e-09!10;UBERON:0006222!3.57e-09!10;UBERON:0005085!4.82e-09!13;UBERON:0000033!6.78e-07!63 | |ontology_enrichment_uberon=UBERON:0000970!3.15e-14!9;UBERON:0000019!3.15e-14!9;UBERON:0000047!3.15e-14!9;UBERON:0004088!3.15e-14!9;UBERON:0002104!3.15e-14!9;UBERON:0001456!3.15e-14!9;UBERON:0003072!3.15e-14!9;UBERON:0003071!3.15e-14!9;UBERON:0004128!3.15e-14!9;UBERON:0000007!5.45e-12!8;UBERON:0003296!5.45e-12!8;UBERON:0010133!5.45e-12!8;UBERON:0001444!3.71e-11!11;UBERON:0000020!5.20e-10!12;UBERON:0001032!5.20e-10!12;UBERON:0004456!5.20e-10!12;UBERON:0003056!6.66e-10!49;UBERON:0001894!3.57e-09!10;UBERON:0006222!3.57e-09!10;UBERON:0005085!4.82e-09!13;UBERON:0000033!6.78e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.23e-18,9;UBERON:0000019,5.23e-18,9;UBERON:0000047,5.23e-18,9;UBERON:0010312,5.23e-18,9;UBERON:0004088,5.23e-18,9;UBERON:0002104,5.23e-18,9;UBERON:0001456,5.23e-18,9;UBERON:0003072,5.23e-18,9;UBERON:0004128,5.23e-18,9;UBERON:0003071,5.23e-18,9;UBERON:0000007,4.23e-15,8;UBERON:0003296,4.23e-15,8;UBERON:0010133,4.23e-15,8;UBERON:0003056,2.33e-14,49;UBERON:0001444,2.55e-14,11;UBERON:0000020,6.12e-13,12;UBERON:0001032,6.12e-13,12;UBERON:0004456,6.12e-13,12;UBERON:0000033,9.00e-12,13;UBERON:0005085,9.00e-12,13;UBERON:0001894,9.98e-12,10;UBERON:0006222,9.98e-12,10;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0010371,1.13e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,2.63772575460388,1.82975287204819,5.2091337055676,0,5.6276261003168,3.51435969886663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6771158944638,130.250563405666,166.449123609834,146.930697921165,116.344119369172,165.396729436878,184.099416049329,184.030187035307,51.2232674063251,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80879211507576,68.0630935438353,64.9380592589428,33.65091449996,19.8621061679346,15.8748247665843,10.2020392773315,15.5277124048446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97195960409936,0.798049746802062,1.36586884603307,0.486213434136588,1.04806581313991,1.10306105070008,1.77797382241292,1.64828045791115,1.28367683836726,1.26348605881899,1.52087579934144,1.13175804831646,1.03005658216871,1.79270426733634,0.918967503289812,0.476293691283074,1.27472758539341,1.15745532278223,2.47251540481984,1.47198920134397,1.02860775715625,0.532427418478012,0.715308569841963,1.30811774969096,1.2234219453993,1.60767754994185,1.09756783723664,0.526139422875686,0.814824683075171,2.24456908663095,2.25406534435931,1.37906275325789,1.63692417267876,0.619747364743864,0.385813221962283,7.24450676020043,1.87145286756327,1.93383948643468,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,2.63772575460388,1.82975287204819,5.2091337055676,0,5.6276261003168,3.51435969886663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6771158944638,130.250563405666,166.449123609834,146.930697921165,116.344119369172,165.396729436878,184.099416049329,184.030187035307,51.2232674063251,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80879211507576,68.0630935438353,64.9380592589428,33.65091449996,19.8621061679346,15.8748247665843,10.2020392773315,15.5277124048446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97195960409936,0.798049746802062,1.36586884603307,0.486213434136588,1.04806581313991,1.10306105070008,1.77797382241292,1.64828045791115,1.28367683836726,1.26348605881899,1.52087579934144,1.13175804831646,1.03005658216871,1.79270426733634,0.918967503289812,0.476293691283074,1.27472758539341,1.15745532278223,2.47251540481984,1.47198920134397,1.02860775715625,0.532427418478012,0.715308569841963,1.30811774969096,1.2234219453993,1.60767754994185,1.09756783723664,0.526139422875686,0.814824683075171,2.24456908663095,2.25406534435931,1.37906275325789,1.63692417267876,0.619747364743864,0.385813221962283,7.24450676020043,1.87145286756327,1.93383948643468,0,0,0 | ||
|short_description=p1@Rax | |short_description=p1@Rax | ||
}} | }} |
Latest revision as of 15:51, 1 October 2015
Short description: | p1@Rax |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rax_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | 0bp_to_ENSMUST00000025396, NM_013833, uc008ffl.1_5end |
EntrezGene: | Rax |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 5.23e-18 | 9 |
camera-type eye | 5.23e-18 | 9 |
simple eye | 5.23e-18 | 9 |
immature eye | 5.23e-18 | 9 |
ocular region | 5.23e-18 | 9 |
visual system | 5.23e-18 | 9 |
face | 5.23e-18 | 9 |
optic cup | 5.23e-18 | 9 |
optic vesicle | 5.23e-18 | 9 |
eye primordium | 5.23e-18 | 9 |
pituitary gland | 4.23e-15 | 8 |
gland of diencephalon | 4.23e-15 | 8 |
neuroendocrine gland | 4.23e-15 | 8 |
pre-chordal neural plate | 2.33e-14 | 49 |
subdivision of head | 2.55e-14 | 11 |
sense organ | 6.12e-13 | 12 |
sensory system | 6.12e-13 | 12 |
entire sense organ system | 6.12e-13 | 12 |
head | 9.00e-12 | 13 |
ectodermal placode | 9.00e-12 | 13 |
diencephalon | 9.98e-12 | 10 |
future diencephalon | 9.98e-12 | 10 |
neurectoderm | 1.44e-09 | 64 |
neural plate | 1.44e-09 | 64 |
presumptive neural plate | 1.44e-09 | 64 |
ecto-epithelium | 1.13e-07 | 73 |