FFCP PHASE1:Mm9::chr2:52414098..52414121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12298 | |EntrezGene=12298 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=121 | |MCL_coexpression_id=121 | ||
|TSSclassifier=NA | |||
|UniProt=Q8R0S4,A2ATZ6,A2ATZ5 | |UniProt=Q8R0S4,A2ATZ6,A2ATZ5 | ||
|association_with_transcript=-11bp_to_ENSMUST00000102761,NM_146123,uc008jra.1,uc008jrb.1_5end | |association_with_transcript=-11bp_to_ENSMUST00000102761,NM_146123,uc008jra.1,uc008jrb.1_5end | ||
|cluster_id=chr2:52414098..52414121,- | |||
|description=CAGE_peak_4_at_Cacnb4_5end | |description=CAGE_peak_4_at_Cacnb4_5end | ||
|id=chr2:52414098..52414121,- | |id=chr2:52414098..52414121,- | ||
|ontology_enrichment_celltype=CL:0000117!9.50e-17!23;CL:0000337!9.50e-17!23;CL:0000540!1.77e-10!33;CL:0000047!1.77e-10!33;CL:0000031!1.77e-10!33;CL:0000404!1.77e-10!33;CL:0000393!1.17e-08!39;CL:0000211!1.17e-08!39;CL:0002319!1.31e-07!43;CL:0000221!3.13e-07!44;CL:0000133!3.13e-07!44 | |ontology_enrichment_celltype=CL:0000117!9.50e-17!23;CL:0000337!9.50e-17!23;CL:0000540!1.77e-10!33;CL:0000047!1.77e-10!33;CL:0000031!1.77e-10!33;CL:0000404!1.77e-10!33;CL:0000393!1.17e-08!39;CL:0000211!1.17e-08!39;CL:0002319!1.31e-07!43;CL:0000221!3.13e-07!44;CL:0000133!3.13e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.58e-24,23;CL:0000337,4.58e-24,23;CL:0000540,5.81e-15,33;CL:0000047,5.81e-15,33;CL:0000031,5.81e-15,33;CL:0000404,5.81e-15,33;CL:0000393,8.86e-12,39;CL:0000211,8.86e-12,39;CL:0002319,3.63e-10,43;CL:0000221,8.22e-10,44;CL:0000133,8.22e-10,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.09e-22!34;UBERON:0001049!4.83e-22!52;UBERON:0005068!4.83e-22!52;UBERON:0006241!4.83e-22!52;UBERON:0007135!4.83e-22!52;UBERON:0001017!5.39e-21!73;UBERON:0005743!5.39e-21!73;UBERON:0000955!7.40e-21!50;UBERON:0006238!7.40e-21!50;UBERON:0000033!8.43e-21!63;UBERON:0000073!1.51e-20!75;UBERON:0001016!1.51e-20!75;UBERON:0002616!5.41e-20!49;UBERON:0002791!6.84e-19!29;UBERON:0003528!6.84e-19!29;UBERON:0001893!6.84e-19!29;UBERON:0002346!2.17e-18!71;UBERON:0003075!2.17e-18!71;UBERON:0007284!2.17e-18!71;UBERON:0003056!5.00e-17!49;UBERON:0003080!1.85e-15!40;UBERON:0004121!2.84e-15!102;UBERON:0000924!2.84e-15!102;UBERON:0006601!2.84e-15!102;UBERON:0002780!1.29e-14!39;UBERON:0001890!1.29e-14!39;UBERON:0006240!1.29e-14!39;UBERON:0000956!6.82e-13!21;UBERON:0001869!6.82e-13!21;UBERON:0000203!6.82e-13!21;UBERON:0007811!4.78e-12!86;UBERON:0002619!1.42e-10!17;UBERON:0000153!1.53e-09!94;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0003076!2.35e-07!12;UBERON:0003057!2.35e-07!12;UBERON:0002420!2.89e-07!8;UBERON:0007245!2.89e-07!8;UBERON:0010009!2.89e-07!8;UBERON:0010011!2.89e-07!8;UBERON:0000454!2.89e-07!8 | |ontology_enrichment_uberon=UBERON:0002020!1.09e-22!34;UBERON:0001049!4.83e-22!52;UBERON:0005068!4.83e-22!52;UBERON:0006241!4.83e-22!52;UBERON:0007135!4.83e-22!52;UBERON:0001017!5.39e-21!73;UBERON:0005743!5.39e-21!73;UBERON:0000955!7.40e-21!50;UBERON:0006238!7.40e-21!50;UBERON:0000033!8.43e-21!63;UBERON:0000073!1.51e-20!75;UBERON:0001016!1.51e-20!75;UBERON:0002616!5.41e-20!49;UBERON:0002791!6.84e-19!29;UBERON:0003528!6.84e-19!29;UBERON:0001893!6.84e-19!29;UBERON:0002346!2.17e-18!71;UBERON:0003075!2.17e-18!71;UBERON:0007284!2.17e-18!71;UBERON:0003056!5.00e-17!49;UBERON:0003080!1.85e-15!40;UBERON:0004121!2.84e-15!102;UBERON:0000924!2.84e-15!102;UBERON:0006601!2.84e-15!102;UBERON:0002780!1.29e-14!39;UBERON:0001890!1.29e-14!39;UBERON:0006240!1.29e-14!39;UBERON:0000956!6.82e-13!21;UBERON:0001869!6.82e-13!21;UBERON:0000203!6.82e-13!21;UBERON:0007811!4.78e-12!86;UBERON:0002619!1.42e-10!17;UBERON:0000153!1.53e-09!94;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0003076!2.35e-07!12;UBERON:0003057!2.35e-07!12;UBERON:0002420!2.89e-07!8;UBERON:0007245!2.89e-07!8;UBERON:0010009!2.89e-07!8;UBERON:0010011!2.89e-07!8;UBERON:0000454!2.89e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.38e-39,54;UBERON:0001049,2.47e-36,52;UBERON:0005068,2.47e-36,52;UBERON:0006241,2.47e-36,52;UBERON:0007135,2.47e-36,52;UBERON:0001017,4.68e-35,73;UBERON:0002020,7.45e-34,34;UBERON:0001016,8.62e-34,75;UBERON:0002346,9.21e-31,64;UBERON:0003075,9.21e-31,64;UBERON:0007284,9.21e-31,64;UBERON:0000955,8.51e-30,47;UBERON:0006238,8.51e-30,47;UBERON:0002616,2.47e-28,46;UBERON:0003528,3.00e-27,29;UBERON:0002791,3.00e-27,29;UBERON:0001893,3.00e-27,29;UBERON:0004121,1.00e-26,95;UBERON:0000924,1.00e-26,95;UBERON:0006601,1.00e-26,95;UBERON:0010371,1.42e-25,73;UBERON:0003080,5.93e-24,40;UBERON:0002780,1.70e-22,39;UBERON:0001890,1.70e-22,39;UBERON:0006240,1.70e-22,39;UBERON:0003056,4.87e-21,49;UBERON:0010314,5.51e-18,92;UBERON:0000956,5.77e-17,21;UBERON:0001869,5.77e-17,21;UBERON:0000203,5.77e-17,21;UBERON:0002021,3.05e-14,10;UBERON:0000411,3.05e-14,10;UBERON:0001950,3.05e-14,10;UBERON:0002619,5.56e-13,17;UBERON:0003076,8.68e-13,12;UBERON:0003057,8.68e-13,12;UBERON:0002420,1.08e-11,8;UBERON:0007245,1.08e-11,8;UBERON:0010009,1.08e-11,8;UBERON:0010011,1.08e-11,8;UBERON:0000454,1.08e-11,8;UBERON:0000025,8.75e-11,114;UBERON:0004111,2.02e-09,122;UBERON:0002240,2.56e-09,6;UBERON:0005174,2.56e-09,6;UBERON:0001137,2.56e-09,6;UBERON:0001948,1.00e-07,5;UBERON:0002315,1.00e-07,5;UBERON:0000369,1.83e-07,5;UBERON:0002435,1.83e-07,5;UBERON:0000204,1.83e-07,5;UBERON:0010082,1.83e-07,5;UBERON:0002950,1.93e-07,4;UBERON:0001891,1.93e-07,4;UBERON:0009616,1.93e-07,4;UBERON:0010286,1.93e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,2.42779753031517,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.14058573539325,1.08004750665353,1.05162480675691,1.14260393761521,2.87129103237098,2.08234358665422,0.862609239164127,0.919218786610021,14.3150645299205,8.55505165170758,8.60196586234964,2.2420668914133,2.56165402086747,1.56274011167028,5.58365998002762,9.56696437053856,8.09830713217094,8.54422897873636,6.97621235915604,4.47358669980721,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0,0,0,0.289198713839823,0,0,0,0,0,28.6925181071316,25.1336048176146,0,0,0,0,22.7681771895331,6.8625090422794,3.5183218591602,6.25767552692195,6.39288643325826,12.6750707181332,9.5722345209977,0,0,0,1.05220927943237,0,0.229902104433473,0,0.60281927134286,0.340182495756639,0.640568601424249,0.937017245597288,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0.822799249567402,0.656669856316381,0.405344047729279,0.146199987425332,0.439100230582101,0.536825675041487,14.7202963994889,2.16099685996497,0,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,23.4403861382176,19.5743516608979,0,0,0,0,0,0,0,0.283076530788832,0,0,0,10.9249247583414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,22.4364615432717,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,5.06357760157895,6.30185064783336,3.95262319390481,2.05524755931193,4.5323633843382,6.75022500231806,5.85417564191487,5.43770890781046,4.65984280576638,0.830298780673413,0,0.682934423016537,0.729320151204882,0.838452650511929,0.551530525350042,0.44449345560323,1.03017528619447,0.320919209591815,1.26348605881899,1.52087579934144,1.32038438970253,1.03005658216871,1.21647789569252,1.03383844120104,0.476293691283074,1.50649623728312,0.77163688185482,0,0.735994600671987,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,1.03520318456864,1.52306294205018,0.365855945745545,1.05227884575137,0.679020569229309,0.561142271657738,0.711810108745045,0.492522411877817,0.818462086339379,1.23949472948773,0.385813221962283,1.74867404556562,0.467863216890817,0.429742108096597,0.191288332068843,0,0 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|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,2.42779753031517,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.14058573539325,1.08004750665353,1.05162480675691,1.14260393761521,2.87129103237098,2.08234358665422,0.862609239164127,0.919218786610021,14.3150645299205,8.55505165170758,8.60196586234964,2.2420668914133,2.56165402086747,1.56274011167028,5.58365998002762,9.56696437053856,8.09830713217094,8.54422897873636,6.97621235915604,4.47358669980721,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0,0,0,0.289198713839823,0,0,0,0,0,28.6925181071316,25.1336048176146,0,0,0,0,22.7681771895331,6.8625090422794,3.5183218591602,6.25767552692195,6.39288643325826,12.6750707181332,9.5722345209977,0,0,0,1.05220927943237,0,0.229902104433473,0,0.60281927134286,0.340182495756639,0.640568601424249,0.937017245597288,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0.822799249567402,0.656669856316381,0.405344047729279,0.146199987425332,0.439100230582101,0.536825675041487,14.7202963994889,2.16099685996497,0,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,23.4403861382176,19.5743516608979,0,0,0,0,0,0,0,0.283076530788832,0,0,0,10.9249247583414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,22.4364615432717,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,5.06357760157895,6.30185064783336,3.95262319390481,2.05524755931193,4.5323633843382,6.75022500231806,5.85417564191487,5.43770890781046,4.65984280576638,0.830298780673413,0,0.682934423016537,0.729320151204882,0.838452650511929,0.551530525350042,0.44449345560323,1.03017528619447,0.320919209591815,1.26348605881899,1.52087579934144,1.32038438970253,1.03005658216871,1.21647789569252,1.03383844120104,0.476293691283074,1.50649623728312,0.77163688185482,0,0.735994600671987,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,1.03520318456864,1.52306294205018,0.365855945745545,1.05227884575137,0.679020569229309,0.561142271657738,0.711810108745045,0.492522411877817,0.818462086339379,1.23949472948773,0.385813221962283,1.74867404556562,0.467863216890817,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p4@Cacnb4 | |short_description=p4@Cacnb4 | ||
}} | }} |
Latest revision as of 18:36, 26 September 2015
Short description: | p4@Cacnb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cacnb4_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | -11bp_to_ENSMUST00000102761, NM_146123, uc008jra.1, uc008jrb.1_5end |
EntrezGene: | Cacnb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.58e-24 | 23 |
neuroblast (sensu Vertebrata) | 4.58e-24 | 23 |
neuron | 5.81e-15 | 33 |
neuronal stem cell | 5.81e-15 | 33 |
neuroblast | 5.81e-15 | 33 |
electrically signaling cell | 5.81e-15 | 33 |
electrically responsive cell | 8.86e-12 | 39 |
electrically active cell | 8.86e-12 | 39 |
neural cell | 3.63e-10 | 43 |
ectodermal cell | 8.22e-10 | 44 |
neurectodermal cell | 8.22e-10 | 44 |