FFCP PHASE1:Mm9::chr1:75139208..75139299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69171 | |EntrezGene=69171 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=735 | |MCL_coexpression_id=735 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UKL4 | |UniProt=Q3UKL4 | ||
|association_with_transcript=0bp_to_ENSMUST00000097695,uc007bnr.1,uc007bns.1_5end | |association_with_transcript=0bp_to_ENSMUST00000097695,uc007bnr.1,uc007bns.1_5end | ||
|cluster_id=chr1:75139208..75139299,- | |||
|description=CAGE_peak_1_at_1810031K17Rik_5end | |description=CAGE_peak_1_at_1810031K17Rik_5end | ||
|id=chr1:75139208..75139299,- | |id=chr1:75139208..75139299,- | ||
|ontology_enrichment_celltype=CL:0002319!3.18e-13!43;CL:0000221!5.71e-13!44;CL:0000133!5.71e-13!44;CL:0000540!1.44e-11!33;CL:0000047!1.44e-11!33;CL:0000031!1.44e-11!33;CL:0000404!1.44e-11!33;CL:0000055!1.18e-08!50;CL:0000117!3.75e-08!23;CL:0000337!3.75e-08!23;CL:0000393!2.59e-07!39;CL:0000211!2.59e-07!39 | |ontology_enrichment_celltype=CL:0002319!3.18e-13!43;CL:0000221!5.71e-13!44;CL:0000133!5.71e-13!44;CL:0000540!1.44e-11!33;CL:0000047!1.44e-11!33;CL:0000031!1.44e-11!33;CL:0000404!1.44e-11!33;CL:0000055!1.18e-08!50;CL:0000117!3.75e-08!23;CL:0000337!3.75e-08!23;CL:0000393!2.59e-07!39;CL:0000211!2.59e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.18e-13,43;CL:0000221,5.71e-13,44;CL:0000133,5.71e-13,44;CL:0000540,1.44e-11,33;CL:0000047,1.44e-11,33;CL:0000031,1.44e-11,33;CL:0000404,1.44e-11,33;CL:0000117,3.75e-08,23;CL:0000337,3.75e-08,23;CL:0000393,2.59e-07,39;CL:0000211,2.59e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-17!73;UBERON:0005743!1.05e-17!73;UBERON:0000073!3.95e-16!75;UBERON:0001016!3.95e-16!75;UBERON:0004121!2.58e-15!102;UBERON:0000924!2.58e-15!102;UBERON:0006601!2.58e-15!102;UBERON:0000033!5.23e-13!63;UBERON:0002346!1.67e-12!71;UBERON:0003075!1.67e-12!71;UBERON:0007284!1.67e-12!71;UBERON:0003056!2.38e-11!49;UBERON:0001049!8.07e-11!52;UBERON:0005068!8.07e-11!52;UBERON:0006241!8.07e-11!52;UBERON:0007135!8.07e-11!52;UBERON:0000955!1.90e-09!50;UBERON:0006238!1.90e-09!50;UBERON:0002616!2.52e-09!49;UBERON:0000153!1.27e-08!94;UBERON:0007811!2.43e-08!86;UBERON:0003080!6.51e-08!40;UBERON:0002780!8.20e-08!39;UBERON:0001890!8.20e-08!39;UBERON:0006240!8.20e-08!39;UBERON:0002020!8.11e-07!34 | |ontology_enrichment_uberon=UBERON:0001017!1.05e-17!73;UBERON:0005743!1.05e-17!73;UBERON:0000073!3.95e-16!75;UBERON:0001016!3.95e-16!75;UBERON:0004121!2.58e-15!102;UBERON:0000924!2.58e-15!102;UBERON:0006601!2.58e-15!102;UBERON:0000033!5.23e-13!63;UBERON:0002346!1.67e-12!71;UBERON:0003075!1.67e-12!71;UBERON:0007284!1.67e-12!71;UBERON:0003056!2.38e-11!49;UBERON:0001049!8.07e-11!52;UBERON:0005068!8.07e-11!52;UBERON:0006241!8.07e-11!52;UBERON:0007135!8.07e-11!52;UBERON:0000955!1.90e-09!50;UBERON:0006238!1.90e-09!50;UBERON:0002616!2.52e-09!49;UBERON:0000153!1.27e-08!94;UBERON:0007811!2.43e-08!86;UBERON:0003080!6.51e-08!40;UBERON:0002780!8.20e-08!39;UBERON:0001890!8.20e-08!39;UBERON:0006240!8.20e-08!39;UBERON:0002020!8.11e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.74e-18,95;UBERON:0000924,3.74e-18,95;UBERON:0006601,3.74e-18,95;UBERON:0001017,1.05e-17,73;UBERON:0001016,3.95e-16,75;UBERON:0002346,9.50e-16,64;UBERON:0003075,9.50e-16,64;UBERON:0007284,9.50e-16,64;UBERON:0010371,5.89e-13,73;UBERON:0003056,2.38e-11,49;UBERON:0001049,8.07e-11,52;UBERON:0005068,8.07e-11,52;UBERON:0006241,8.07e-11,52;UBERON:0007135,8.07e-11,52;UBERON:0000073,1.88e-10,54;UBERON:0000955,1.16e-09,47;UBERON:0006238,1.16e-09,47;UBERON:0002616,1.53e-09,46;UBERON:0010314,3.14e-09,92;UBERON:0003080,6.51e-08,40;UBERON:0002780,8.20e-08,39;UBERON:0001890,8.20e-08,39;UBERON:0006240,8.20e-08,39;UBERON:0002020,8.11e-07,34 | |||
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| ||
|short_description=p1@1810031K17Rik | |short_description=p1@1810031K17Rik | ||
}} | }} |
Latest revision as of 15:08, 1 October 2015
Short description: | p1@1810031K17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1810031K17Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:735 |
Association with transcript: | 0bp_to_ENSMUST00000097695, uc007bnr.1, uc007bns.1_5end |
EntrezGene: | 1810031K17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.18e-13 | 43 |
ectodermal cell | 5.71e-13 | 44 |
neurectodermal cell | 5.71e-13 | 44 |
neuron | 1.44e-11 | 33 |
neuronal stem cell | 1.44e-11 | 33 |
neuroblast | 1.44e-11 | 33 |
electrically signaling cell | 1.44e-11 | 33 |
CNS neuron (sensu Vertebrata) | 3.75e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.75e-08 | 23 |
electrically responsive cell | 2.59e-07 | 39 |
electrically active cell | 2.59e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.74e-18 | 95 |
ectoderm | 3.74e-18 | 95 |
presumptive ectoderm | 3.74e-18 | 95 |
central nervous system | 1.05e-17 | 73 |
nervous system | 3.95e-16 | 75 |
neurectoderm | 9.50e-16 | 64 |
neural plate | 9.50e-16 | 64 |
presumptive neural plate | 9.50e-16 | 64 |
ecto-epithelium | 5.89e-13 | 73 |
pre-chordal neural plate | 2.38e-11 | 49 |
neural tube | 8.07e-11 | 52 |
neural rod | 8.07e-11 | 52 |
future spinal cord | 8.07e-11 | 52 |
neural keel | 8.07e-11 | 52 |
regional part of nervous system | 1.88e-10 | 54 |
brain | 1.16e-09 | 47 |
future brain | 1.16e-09 | 47 |
regional part of brain | 1.53e-09 | 46 |
structure with developmental contribution from neural crest | 3.14e-09 | 92 |
anterior neural tube | 6.51e-08 | 40 |
regional part of forebrain | 8.20e-08 | 39 |
forebrain | 8.20e-08 | 39 |
future forebrain | 8.20e-08 | 39 |
gray matter | 8.11e-07 | 34 |