FFCP PHASE1:Hg19::chr2:30865226..30865229,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:30865226..30865229,+
|short_description=p17@LCLAT1
|description=CAGE_peak_17_at_LCLAT1_5end
|association_with_transcript=-364bp_to_BX537607_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253558 | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26756 | |HGNC=26756 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-364bp_to_BX537607_5end | |||
|cluster_id=chr2:30865226..30865229,+ | |||
|description=CAGE_peak_17_at_LCLAT1_5end | |||
|id=chr2:30865226..30865229,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;3.99e-50;1!CL:0002372;3.99e-50;1!CL:0000333;2.22e-40;5!CL:0002321;2.00e-30;15!CL:0000056;1.13e-13;4!CL:0000737;1.13e-13;4!CL:0000680;2.18e-08;7!CL:0000188;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.42e-50,1;CL:0002372,2.42e-50,1;CL:0000737,1.00e-13,4;CL:0000515,1.00e-13,4;CL:0000188,7.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;1.13e-13;4 | |||
|ontology_enrichment_disease=DOID:0050687!9.74e-11!143;DOID:162!5.70e-09!235;DOID:14566!1.40e-08!239;DOID:305!3.80e-08!106;DOID:170!1.44e-07!6;DOID:0050686!6.56e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:169;7.07e-34;6!DOID:3193;7.14e-26;2!DOID:962;7.14e-26;2!DOID:171;7.72e-21;10!DOID:1192;9.45e-18;3!DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.35e-34,6;DOID:3193,9.18e-26,2;DOID:962,9.18e-26,2;DOID:171,8.54e-21,10;DOID:1192,1.12e-17,3;DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.22e-40;5!UBERON:0002410;2.22e-40;5!UBERON:0003714;7.14e-26;2!UBERON:0000010;5.13e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.71e-40,5;UBERON:0002410,2.71e-40,5;UBERON:0003714,9.18e-26,2;UBERON:0000010,5.74e-23,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0.171986032471617,0.290268993867255,0,0.164230914106418,0,0,0,0,0,0,0.391102765469606,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,2.372145850727,0,0.327628914576042,0,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p17@LCLAT1 | |||
}} | }} |
Latest revision as of 22:23, 16 September 2015
Short description: | p17@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LCLAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -364bp_to_BX537607_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.42e-50 | 1 |
myotube | 2.42e-50 | 1 |
striated muscle cell | 1.00e-13 | 4 |
skeletal muscle myoblast | 1.00e-13 | 4 |
cell of skeletal muscle | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.71e-40 | 5 |
autonomic nervous system | 2.71e-40 | 5 |
neural tissue | 9.18e-26 | 2 |
peripheral nervous system | 5.74e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.35e-34 | 6 |
peripheral nerve sheath neoplasm | 9.18e-26 | 2 |
neurofibroma | 9.18e-26 | 2 |
neuroectodermal tumor | 8.54e-21 | 10 |
peripheral nervous system neoplasm | 1.12e-17 | 3 |
germ cell and embryonal cancer | 4.53e-10 | 22 |
germ cell cancer | 4.53e-10 | 22 |