FFCP PHASE1:Hg19::chr2:39963869..39963884,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:39963869..39963884,-
|short_description=p@chr2:39963869..39963884,-
|description=CAGE_peak_at_chr2:39963869..39963884,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:39963869..39963884,- | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_at_chr2:39963869..39963884,- | |||
|id=chr2:39963869..39963884,- | |||
|ontology_enrichment_celltype=CL:0000055!3.39e-16!180;CL:0000057!3.20e-09!75;CL:0002334!3.37e-09!12;CL:0002620!3.69e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.07e-27;6!CL:0002568;3.56e-19;1!CL:0000153;1.01e-18;9!CL:0000447;1.01e-18;9!CL:0000327;1.67e-11;15!CL:0002589;2.85e-10;2!CL:0002580;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.47e-27,6;CL:0000138,1.47e-27,6;CL:0002568,2.25e-19,1;CL:0000153,1.25e-18,9;CL:0000447,1.25e-18,9;CL:0000327,1.89e-11,15;CL:0002589,2.99e-10,2;CL:0002580,2.05e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;2.85e-10;2!UBERON:0007204;2.85e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,2.99e-10,2;UBERON:0007204,2.99e-10,2 | |||
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| ||
|short_description=p@chr2:39963869..39963884,- | |||
}} | }} |
Latest revision as of 10:05, 29 July 2015
Short description: | p@chr2:39963869..39963884, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:39963869..39963884, - |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.47e-27 | 6 |
chondrocyte | 1.47e-27 | 6 |
mesenchymal stem cell of Wharton's jelly | 2.25e-19 | 1 |
GAG secreting cell | 1.25e-18 | 9 |
carbohydrate secreting cell | 1.25e-18 | 9 |
extracellular matrix secreting cell | 1.89e-11 | 15 |
smooth muscle cell of the brachiocephalic vasculature | 2.99e-10 | 2 |
preadipocyte of the breast | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 2.99e-10 | 2 |
brachiocephalic vasculature | 2.99e-10 | 2 |