FFCP PHASE1:Hg19::chr2:61108808..61108821,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:61108808..61108821,+
|short_description=p3@REL
|description=CAGE_peak_3_at_REL_5end
|association_with_transcript=17bp_to_ENST00000394479_5end
|EntrezGene=...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5966 | |EntrezGene=5966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9954 | |HGNC=9954 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RU2 | |UniProt=Q17RU2 | ||
|association_with_transcript=17bp_to_ENST00000394479_5end | |||
|cluster_id=chr2:61108808..61108821,+ | |||
|coexpression_cluster_id=C1685 | |||
|description=CAGE_peak_3_at_REL_5end | |||
|id=chr2:61108808..61108821,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.46e-52!140;CL:0000037!8.73e-43!172;CL:0000566!8.73e-43!172;CL:0000988!2.10e-40!182;CL:0002032!2.42e-39!165;CL:0000837!2.42e-39!165;CL:0002031!2.98e-39!124;CL:0002087!1.21e-38!119;CL:0000766!1.89e-31!76;CL:0000557!4.75e-28!71;CL:0000860!3.30e-26!45;CL:0002057!1.26e-25!42;CL:0002009!9.38e-25!65;CL:0000763!1.35e-24!112;CL:0000049!1.35e-24!112;CL:0000839!2.74e-24!70;CL:0002194!2.21e-23!63;CL:0000576!2.21e-23!63;CL:0000040!2.21e-23!63;CL:0000559!2.21e-23!63;CL:0000542!2.89e-13!53;CL:0000051!2.89e-13!53;CL:0000838!3.86e-13!52;CL:0000451!8.01e-08!10;CL:0000945!3.65e-07!24;CL:0000826!3.65e-07!24;CL:0000134!7.24e-07!358;CL:0000094!7.88e-07!8;CL:0000990!8.84e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.45e-30;33!CL:0002057;2.45e-30;33!CL:0000473;1.34e-26;39!CL:0000234;1.34e-26;39!CL:0000766;1.09e-21;69!CL:0000576;1.73e-21;48!CL:0002087;2.59e-16;104!CL:0000738;5.60e-16;136!CL:0000451;4.13e-12;10!CL:0000988;1.08e-10;177!CL:0000094;2.01e-10;8!CL:0000990;2.36e-10;8!CL:0000945;1.12e-09;24!CL:0000542;1.63e-09;53!CL:0000081;5.81e-09;11!CL:0000763;6.29e-09;100!CL:0000219;5.46e-08;193!CL:0002393;1.58e-07;6!CL:0002397;1.58e-07;6!CL:0000453;1.95e-07;5!CL:0000840;5.88e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.17e-76,136;CL:0000037,1.27e-60,168;CL:0000988,3.43e-60,177;CL:0002031,1.34e-58,120;CL:0002032,1.02e-55,161;CL:0000837,1.02e-55,161;CL:0002087,2.48e-55,115;CL:0000766,1.55e-51,72;CL:0000557,9.34e-46,67;CL:0000473,1.55e-43,48;CL:0000234,1.55e-43,48;CL:0000860,4.10e-42,42;CL:0002057,4.10e-42,42;CL:0000839,1.48e-40,66;CL:0002009,3.61e-40,61;CL:0000763,4.75e-38,108;CL:0000049,4.75e-38,108;CL:0002194,7.81e-38,59;CL:0000576,7.81e-38,59;CL:0000040,7.81e-38,59;CL:0000559,7.81e-38,59;CL:0000134,3.51e-17,354;CL:0002320,3.88e-16,361;CL:0000838,1.15e-15,52;CL:0000542,3.74e-15,53;CL:0000051,3.74e-15,53;CL:0000219,5.88e-13,386;CL:0000451,4.33e-12,10;CL:0000094,1.98e-10,8;CL:0000990,2.41e-10,8;CL:0002393,3.36e-10,9;CL:0002397,3.36e-10,9;CL:0000048,1.07e-09,427;CL:0000034,1.34e-09,441;CL:0000945,1.42e-09,24;CL:0000826,1.42e-09,24;CL:0000723,1.96e-09,433;CL:0000081,5.75e-09,11;CL:0000453,1.96e-07,5;CL:0000840,5.99e-07,5;CL:0001029,5.99e-07,5;CL:0000236,7.67e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;3.89e-30;42!CL:0000049;3.11e-10;108!CL:0000051;1.63e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.29e-27!102;UBERON:0003061!2.29e-27!102;UBERON:0002193!3.18e-25!112;UBERON:0002371!2.70e-23!80;UBERON:0001474!1.27e-21!86;UBERON:0002405!6.60e-21!115;UBERON:0004765!2.63e-14!101;UBERON:0001434!2.63e-14!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.45e-46,98;UBERON:0003061,8.45e-46,98;UBERON:0002193,1.23e-44,108;UBERON:0002405,3.05e-42,93;UBERON:0002371,2.19e-40,76;UBERON:0001474,4.90e-37,82;UBERON:0004765,9.56e-32,90;UBERON:0001434,2.22e-26,100;UBERON:0002384,1.39e-15,371;UBERON:0003081,1.70e-11,203;UBERON:0002204,1.24e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0,2.75088260692625,3.20192298854788,2.2826126580967,12.194292582316,29.9386930515826,16.8749574414523,0.919421224478927,0,0.369754010166788,0.774672005803016,3.41206157969812,1.76160263600908,48.1976005422733,32.8892893851032,32.3346197366619,0.671746422719773,0.971680998056939,0.77272670290256,2.90796477559129,4.53451132426571,8.49044214157357,10.9241647345672,16.0355476328512,24.1570969298181,5.46615545412086,7.42866048934392,13.4794871036494,17.2372840368309,36.7926269642781,37.9194162464157,5.83551252582075,9.27880910196676,20.4498370845027,19.2832852193669,31.7719736805333,44.1142616801338,1.31940520074686,2.79249120670285,5.11469700639233,22.6363206130296,72.6253087604659,70.3789141365,6.02996796616184,7.30076085788282,14.986030284653,13.3187890579341,48.9809255863461,52.2162939277459,3.59133986730301,8.92938059853183,7.75736988380991,3.25753030324836,3.30389164251314,7.23265140136861,7.12531859353121,6.16641699317179,7.67189445811463,3.51992488922645,3.82297027883492,0.889509253863555,4.26730222566507,2.80277190925209,2.29900975981793,1.32208974556972,0,8.53819453664173,21.1405388173538,21.4073007750128,9.25199300053181,33.6305137788922,0.263384084775077,4.72103448273199,6.6811829667358,9.66327045297693,0.167186495390678,3.2592226663359,0.946895611469467,1.94826728407911,0.668462741311041,4.12448270464772,1.55073726208535,0.270803863765016,0.128091319725675,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.113309342697566,4.59864592322305,2.74901956386104,3.54227568827304,0.95569624297229,0.651083453856419,1.90090408889675,0.903450714466637,1.53583933385302,1.24930726552346,0.710331756132051,0,17.338179917327,26.4765793825672,14.6272647921627,0,0,0,0,0,0,0,0.486634870302636,0.472674085820339,0.443458794925128,0.43917392846563,0.458426764241994,0,0.741568885568859,4.54366351116557,4.35324343248168,2.26028532882071,4.76981248610684,8.00792875092179,5.57186251994347,0.198762407366705,0,0,0,0,0,0.208994966536811,1.29208379584664,1.06729878806013,0,0.805658634218294,0,0.732186172644509,0,0,0.446498641420399,0,0.225222960966644,0,0,0.183201743930407,72.4792295898348,112.456276603014,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0.490385709340376,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.89694817844431,0.213557388818567,0,0,0,0,0.37223371266318,0.337552664482532,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0,0,0,0.545492241181669,1.14721838155602,0,0,0.464775771478074,0,0,0.36497735907583,0,0,0,0,0,0,0.674338760312407,1.44606617930089,0.55146986366197,0.871517776369625,0.237270619111097,0.808987848960987,0.98110732562673,0,0.738155454624648,0,0,0,2.53510069643662,0,1.77236972004421,0.441463099414651,0.245976877086227,0,0.439001141634502,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0,0.117408694235822,1.01056513432752,0,1.14152491340759,2.37061319387782,0.858486162094873,1.72351904261178,2.34004265139238,1.48631162288728,0,0.503946384596579,0.425325291727159,0.268675568108545,1.16253575405585,0.383382679165211,37.4424060800917,1.67292024625129,11.1957182392017,9.94427678577034,7.70078843900918,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.336393253036082,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,0.301439377059586,0,0.299918973546171,0,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0.784596007954691,15.5654300559523,17.4658335636209,18.6097402605635,0,0,0,0,0.637938751653163,17.9761685747324,26.9245313283622,37.7118117226792,0,0,0,1.03985430765404,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0,0,0,8.89102512328416,14.8842798564846,17.289864364158,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.348631135379878,0.120859449591622,0.802025881213139,0.552485933615378,0.114814448164607,0,0,0,0,0,0,0,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0.413509717453592,0.107420244868274,0.435050081742686,0.0852266274161009,0,0,0.960950336825531,1.91419068741876,0.50578890427775,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0.709522128141196,0,0,0.379473173765715,0,0.0962221127255121,1.34060455107157,1.08890984861323,1.22386941009813,0,3.36942951335251,0.886860307073351,1.1486170010348,0.507447609232169,0,0.569647187174163,0.714695326373367,0,0,1.62009431171434,4.75875105776562,0.320472213382419,0,9.55656842326024,0.743212700502875,0.144269212976445,0.142283686696828,0,0.399158742865633,0.957526850661834,0.635020748171649,1.29848776109822,0.561594356226918,1.14117339516596,0,0,1.01575066680962,0.48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| ||
|short_description=p3@REL | |||
}} | }} |
Latest revision as of 20:46, 17 September 2015
Short description: | p3@REL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_REL_5end |
Coexpression cluster: | C1685_immature_CD14_Eosinophils_CD34_migratory_lymphoma_Neutrophils |
Association with transcript: | 17bp_to_ENST00000394479_5end |
EntrezGene: | REL |
HGNC: | 9954 |
UniProt: | Q17RU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.45e-46 | 98 |
blood island | 8.45e-46 | 98 |
hemolymphoid system | 1.23e-44 | 108 |
immune system | 3.05e-42 | 93 |
bone marrow | 2.19e-40 | 76 |
bone element | 4.90e-37 | 82 |
skeletal element | 9.56e-32 | 90 |
skeletal system | 2.22e-26 | 100 |
connective tissue | 1.39e-15 | 371 |
lateral plate mesoderm | 1.70e-11 | 203 |
musculoskeletal system | 1.24e-08 | 167 |