FFCP PHASE1:Hg19::chr2:73339985..73340009,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:73339985..73340009,-
|short_description=p2@RAB11FIP5
|description=CAGE_peak_2_at_RAB11FIP5_5end
|association_with_transcript=136bp_to_ENST00000258098,NM_01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26056 | |EntrezGene=26056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24845 | |HGNC=24845 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXF6,Q9UFM0 | |UniProt=Q9BXF6,Q9UFM0 | ||
|association_with_transcript=136bp_to_ENST00000258098,NM_015470,uc002siu.3_5end | |||
|cluster_id=chr2:73339985..73340009,- | |||
|description=CAGE_peak_2_at_RAB11FIP5_5end | |||
|id=chr2:73339985..73340009,- | |||
|ontology_enrichment_celltype=CL:0000222!1.22e-25!119;CL:0000055!2.13e-23!180;CL:0000220!6.15e-22!246;CL:0002321!2.27e-21!248;CL:0000680!9.74e-14!57;CL:0000056!9.74e-14!57;CL:0000355!9.74e-14!57;CL:0000359!1.57e-13!32;CL:0000192!2.04e-13!42;CL:0000514!2.04e-13!42;CL:0000183!5.79e-13!59;CL:0000187!7.22e-13!54;CL:0000057!2.86e-12!75;CL:0000213!2.38e-11!57;CL:0000215!2.38e-11!57;CL:0000393!6.99e-10!60;CL:0000211!6.99e-10!60;CL:0002139!2.26e-09!24;CL:0000115!1.06e-08!35;CL:0000076!1.15e-08!62;CL:0002078!1.22e-08!44;CL:0000071!2.54e-08!18;CL:0002546!2.54e-08!18;CL:0002620!8.53e-08!23;CL:0002371!4.61e-07!591;CL:0000144!8.95e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.45e-13;32!CL:0000192;3.23e-10;43!CL:0002139;8.46e-10;24!CL:0000071;7.66e-09;18!CL:0002620;2.26e-08;23!CL:0000115;4.09e-08;36!CL:0000213;1.14e-07;58!CL:0000215;1.14e-07;58!CL:0000187;4.95e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.69e-26,121;CL:0002321,2.05e-19,250;CL:0000359,4.25e-14,32;CL:0000680,9.14e-14,58;CL:0000056,9.14e-14,58;CL:0000355,9.14e-14,58;CL:0000192,1.58e-13,43;CL:0000514,1.58e-13,43;CL:0000057,3.76e-13,76;CL:0000187,7.59e-13,55;CL:0000213,5.24e-12,58;CL:0000215,5.24e-12,58;CL:0002139,6.40e-10,24;CL:0000115,1.24e-09,36;CL:0000393,1.69e-09,61;CL:0000211,1.69e-09,61;CL:0002078,3.36e-09,45;CL:0000071,8.53e-09,18;CL:0002546,8.53e-09,18;CL:0002620,3.11e-08,23;CL:0000076,3.57e-08,63 | |||
|ontology_enrichment_development_v019=CL:0000514;3.23e-10;43!CL:0002546;7.66e-09;18!CL:0000222;6.39e-08;121!CL:0000355;1.97e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.62e-25!84;UBERON:0000055!5.86e-24!69;UBERON:0001981!1.38e-23!60;UBERON:0007500!1.38e-23!60;UBERON:0004537!1.38e-23!60;UBERON:0006965!1.38e-23!60;UBERON:0002049!2.00e-22!79;UBERON:0007798!2.00e-22!79;UBERON:0001637!7.86e-21!42;UBERON:0003509!7.86e-21!42;UBERON:0004572!7.86e-21!42;UBERON:0003914!5.79e-18!118;UBERON:0004573!5.95e-17!33;UBERON:0004571!5.95e-17!33;UBERON:0000486!1.02e-16!82;UBERON:0000475!7.37e-16!365;UBERON:0000914!8.89e-16!83;UBERON:0002329!8.89e-16!83;UBERON:0003077!8.89e-16!83;UBERON:0003059!8.89e-16!83;UBERON:0007282!8.89e-16!83;UBERON:0009618!8.89e-16!83;UBERON:0007285!8.89e-16!83;UBERON:0004290!1.06e-14!70;UBERON:0000483!5.01e-14!309;UBERON:0002100!5.57e-14!216;UBERON:0000119!6.38e-14!312;UBERON:0001009!7.37e-14!113;UBERON:0000490!7.53e-14!138;UBERON:0005256!8.99e-14!143;UBERON:0004535!9.56e-14!110;UBERON:0001134!1.00e-12!61;UBERON:0002036!1.00e-12!61;UBERON:0003082!1.00e-12!61;UBERON:0002385!2.43e-12!63;UBERON:0001015!2.43e-12!63;UBERON:0000383!2.43e-12!63;UBERON:0004111!2.51e-11!241;UBERON:0000477!2.66e-10!286;UBERON:0000947!4.36e-10!21;UBERON:0010191!4.36e-10!21;UBERON:0000467!1.60e-09!625;UBERON:0003104!1.94e-09!238;UBERON:0009142!1.94e-09!238;UBERON:0000480!2.84e-09!626;UBERON:0000468!2.95e-09!659;UBERON:0000025!6.59e-09!194;UBERON:0002097!1.35e-08!40;UBERON:0000481!1.37e-08!347;UBERON:0003102!1.64e-08!95;UBERON:0001986!2.54e-08!18;UBERON:0004638!2.54e-08!18;UBERON:0004852!2.54e-08!18;UBERON:0002199!3.51e-08!45;UBERON:0002416!3.51e-08!45;UBERON:0000487!2.24e-07!22;UBERON:0006914!2.35e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.88e-16;33!UBERON:0004571;1.88e-16;33!UBERON:0001637;3.65e-16;42!UBERON:0003509;3.65e-16;42!UBERON:0004572;3.65e-16;42!UBERON:0007500;3.29e-14;56!UBERON:0001981;3.29e-14;56!UBERON:0004537;3.29e-14;56!UBERON:0000055;4.24e-12;65!UBERON:0000947;1.10e-10;21!UBERON:0010191;1.10e-10;21!UBERON:0003914;3.26e-10;74!UBERON:0002049;1.14e-09;75!UBERON:0007798;1.14e-09;75!UBERON:0004638;7.66e-09;18!UBERON:0001986;7.66e-09;18!UBERON:0004852;7.66e-09;18!UBERON:0000487;1.21e-07;22!UBERON:0006914;1.29e-07;25!UBERON:0000490;2.37e-07;33!UBERON:0002097;3.55e-07;41 | |||
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| ||
|short_description=p2@RAB11FIP5 | |||
}} | }} |
Latest revision as of 09:09, 18 September 2015
Short description: | p2@RAB11FIP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB11FIP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_ENST00000258098, NM_015470, uc002siu.3_5end |
EntrezGene: | RAB11FIP5 |
HGNC: | 24845 |
UniProt: | Q9BXF6Q9UFM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.69e-26 | 121 |
embryonic cell | 2.05e-19 | 250 |
vascular associated smooth muscle cell | 4.25e-14 | 32 |
muscle precursor cell | 9.14e-14 | 58 |
myoblast | 9.14e-14 | 58 |
multi-potent skeletal muscle stem cell | 9.14e-14 | 58 |
smooth muscle cell | 1.58e-13 | 43 |
smooth muscle myoblast | 1.58e-13 | 43 |
fibroblast | 3.76e-13 | 76 |
muscle cell | 7.59e-13 | 55 |
lining cell | 5.24e-12 | 58 |
barrier cell | 5.24e-12 | 58 |
endothelial cell of vascular tree | 6.40e-10 | 24 |
endothelial cell | 1.24e-09 | 36 |
electrically responsive cell | 1.69e-09 | 61 |
electrically active cell | 1.69e-09 | 61 |
meso-epithelial cell | 3.36e-09 | 45 |
blood vessel endothelial cell | 8.53e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.53e-09 | 18 |
skin fibroblast | 3.11e-08 | 23 |
squamous epithelial cell | 3.57e-08 | 63 |