FFCP PHASE1:Hg19::chr2:74730087..74730102,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:74730087..74730102,-
|short_description=p4@LBX2
|description=CAGE_peak_4_at_LBX2_5end
|association_with_transcript=8bp_to_ENST00000341396_5end
|EntrezGene...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85474 | |EntrezGene=85474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15525 | |HGNC=15525 | ||
|TSSclassifier=strong | |||
|UniProt=G3V218 | |UniProt=G3V218 | ||
|association_with_transcript=8bp_to_ENST00000341396_5end | |||
|cluster_id=chr2:74730087..74730102,- | |||
|description=CAGE_peak_4_at_LBX2_5end | |||
|id=chr2:74730087..74730102,- | |||
|ontology_enrichment_celltype=CL:0000066!8.79e-11!254;CL:0000076!7.93e-09!62 | |||
|ontology_enrichment_celltype_v019=CL:0002567;4.21e-08;3!CL:0000182;5.31e-07;12!CL:0000319;7.12e-07;1!CL:0000077;8.79e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,5.22e-08,3;CL:0000182,5.17e-07,12;CL:0000319,7.35e-07,1;CL:0000077,7.49e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.24e-07;11!UBERON:0001041;1.35e-07;30 | |||
|ontology_enrichment_disease=DOID:305!5.86e-17!106;DOID:0050687!1.03e-16!143;DOID:14566!2.55e-16!239;DOID:162!5.11e-16!235;DOID:7!1.12e-09!39;DOID:1749!1.44e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3030;7.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.58e-10,235;DOID:0050687,5.49e-10,143;DOID:14566,7.66e-10,239;DOID:305,6.40e-09,106;DOID:3030,7.35e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000949;4.16e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000949,1.00e-07,45 | |||
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| ||
|short_description=p4@LBX2 | |||
}} | }} |
Latest revision as of 11:26, 18 September 2015
Short description: | p4@LBX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LBX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000341396_5end |
EntrezGene: | LBX2 |
HGNC: | 15525 |
UniProt: | G3V218 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 5.22e-08 | 3 |
hepatocyte | 5.17e-07 | 12 |
mucus secreting cell | 7.35e-07 | 1 |
mesothelial cell | 7.49e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endocrine system | 1.00e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.58e-10 | 235 |
cell type cancer | 5.49e-10 | 143 |
disease of cellular proliferation | 7.66e-10 | 239 |
carcinoma | 6.40e-09 | 106 |
mucinous adenocarcinoma | 7.35e-07 | 1 |