FFCP PHASE1:Hg19::chr2:9347003..9347010,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:9347003..9347010,+
|short_description=p4@ASAP2
|description=CAGE_peak_4_at_ASAP2_5end
|association_with_transcript=109bp_to_ENST00000281419,ENST00000315273...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8853 | |EntrezGene=8853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2721 | |HGNC=2721 | ||
|TSSclassifier=strong | |||
|UniProt=O43150 | |UniProt=O43150 | ||
|association_with_transcript=109bp_to_ENST00000281419,ENST00000315273,NM_001135191,NM_003887,uc002qzh.2,uc002qzi.2_5end | |||
|cluster_id=chr2:9347003..9347010,+ | |||
|coexpression_cluster_id=C2706 | |||
|description=CAGE_peak_4_at_ASAP2_5end | |||
|id=chr2:9347003..9347010,+ | |||
|ontology_enrichment_celltype=CL:0000220!4.01e-15!246;CL:0000066!4.51e-15!254;CL:0002321!7.05e-15!248;CL:0000222!9.96e-08!119;CL:0000055!8.47e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.05e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.87e-11,253;CL:0000349,1.84e-08,19;CL:0002321,2.44e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.11e-11!143;DOID:305!1.42e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.16e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.41e-09!659;UBERON:0000119!7.50e-09!312;UBERON:0000467!1.34e-08!625;UBERON:0000483!1.44e-08!309;UBERON:0000480!2.09e-08!626;UBERON:0000475!8.83e-08!365;UBERON:0004573!1.00e-07!33;UBERON:0004571!1.00e-07!33;UBERON:0000481!1.29e-07!347;UBERON:0001637!2.75e-07!42;UBERON:0003509!2.75e-07!42;UBERON:0004572!2.75e-07!42;UBERON:0002100!6.16e-07!216;UBERON:0001981!6.42e-07!60;UBERON:0007500!6.42e-07!60;UBERON:0004537!6.42e-07!60;UBERON:0006965!6.42e-07!60;UBERON:0002050!6.78e-07!605;UBERON:0005423!6.78e-07!605;UBERON:0000923!9.31e-07!604;UBERON:0005291!9.31e-07!604;UBERON:0006598!9.31e-07!604;UBERON:0002532!9.31e-07!604;UBERON:0002049!9.96e-07!79;UBERON:0007798!9.96e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;6.36e-09;7!UBERON:0005631;1.29e-07;10!UBERON:0000158;1.29e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.63e-08,7;UBERON:0004573,2.13e-07,33;UBERON:0004571,2.13e-07,33;UBERON:0005631,2.63e-07,14;UBERON:0000158,2.63e-07,14;UBERON:0004871,4.48e-07,8 | |||
|phase1_expression=0.726713517082227,0,0.704772020479856,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.982935746006035,0,4.58726881473362,4.22027165165526,0.866364470720326,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,1.22400414746552,0,0.85870796139317,0.684372125364421,0.502170558379211,0,0,0.0787107813136792,0,0,0,1.83884244895785,0.90361775633475,1.47901604066715,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.511450247374121,1.0843174571537,0,0.579386075843295,0.795285947051099,0.973269740605272,0.567208902984407,0.886917589850256,1.40535657109002,0.392937226493138,0.364295288292542,0,0,0,0.132957960518865,0.715471872916026,1.14398982156026,0.371457501329565,0.79504962946682,0.860234595106124,0.347140501607594,1.69592382577203,0,0.550236083880135,0.626984899610432,0,1.06729878806013,0.33472061276467,0,0.760272105718513,0,0.735326160691737,0,0.535798369704479,0.898117490504679,0.788280363383256,3.06633274931766,0,0.366403487860815,0,0,0.436094052142534,1.98788780678127,1.51956613997496,3.04541115870403,2.29469296599051,1.77334191099179,0.560677600142307,0,0.74000264525148,0.933633106199299,1.21239604862719,0.817309515567294,0,0.576175924479999,0,0.936480230490962,0.570471821544449,0.149448680551801,0.23486899728753,0.485618833104395,0.280901613404497,1.63323337003915,0.61417158655884,0.619954687054593,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0.250237039743928,1.6623846929051,0.438977620880838,0.612975591598039,0.300476117813194,0.567160915800105,0.358779271377724,0.427114777637135,0.423863802319124,1.50045548042201,0.412210116953756,0.515281080091258,0.744467425326359,2.19409231913646,0.487185025805993,0.504867548488229,0.552299391853796,0.646584227275248,0,0.604512589365842,1.01736355386293,1.15956511897978,0.818238361772504,2.29443676311203,0.243947412259191,0.132529768321485,0,0,0.252320850875628,0.36497735907583,0,0,2.76269842704961,1.39310378409594,0,0.591534000199219,0.505754070234305,0.241011029883482,0.992645754591546,0.871517776369625,1.18635309555548,1.34831308160164,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,1.3725424823882,0.658501712451753,0,1.00528972411631,0.370353780634118,0.977424915930974,1.03993478527958,0,0.463721619900307,0.939269553886573,0.144366447761074,0.462985512576611,0.570762456703795,1.58040879591855,1.71697232418975,0,0.702012795417713,0,0.93733833986777,1.34385702559088,1.70130116690864,2.86587272649115,1.16253575405585,3.06706143332169,0,0,0,0,0,1.33345578013555,0.381988425558278,0,0,0.616964956219941,0.600686115687835,0,0.784917590417525,0.87192013766656,0.4400297149257,2.97324946242889,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0,0.857867961948885,0.542621605391443,0,0,0.710783897485092,0,1.20575750823834,3.48613383440118,1.19967589418468,0,0,0,2.39624855491583,1.14861935834114,1.42636905040718,1.01346914667305,0.61642896765115,1.96967059563885,0,0,0,0,1.01637849688985,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0,0.500170521059677,1.08506009479894,1.87173775377726,1.42743191037729,1.57702415033935,1.7571212248907,0.300946099727719,2.27407504055985,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,2.12189300012382,0,1.5119514666484,1.24053903909388,0.61384789315225,0,1.28139149255701,1.02341449813341,1.44768529029247,0,0.154209693802656,0.532685175939381,0.574890092096664,0.519254429183621,0,0.725156697549733,0.802025881213139,0.828728900423067,0.68888668898764,0.546273504020151,0.131124414959424,0.902399225814824,0.539107359730903,0,0,0.633309773357254,1.13733384070897,0.170093705276516,1.0795795805107,0,0.270946437543853,0.501689773854853,0.509752546090077,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,0,0.183138929636687,0.41254749960294,1.14853107599234,0,0,0.096670718292122,0.462145851343933,0.767518373630648,0.275673144969061,0.429680979473094,0.435050081742686,0.596586391912706,0.178064071293475,0.991709492165869,3.84380134730212,4.08360679982669,1.51736671283325,1.39453664789186,1.88887408098384,2.7881490806424,0.924100740528266,1.06461206063404,0.869932992075073,1.29726953372744,1.43124886741991,0,0.316379424718726,0.571890581771475,0,0.42793898803392,0.636406495851874,2.35484592059769,0,0.54907405947211,0.353437207037059,1.2130948894399,1.58510321173008,0.421258456238981,0,0.974853958525138,1.05650146756755,0.409499734223957,0.141405431953713,1.13008116620243,2.75682671773062,3.3171948762061,2.63070531152258,1.15755106853338,0.655894752046633,1.01455188481352,0,0.563391205064483,0.430234056612155,0.687743287091848,0.7133421029625,0.354761064070598,0.844430541190656,1.31717957183961,0.379473173765715,0.349934720244983,1.15466535270614,0.67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| ||
|short_description=p4@ASAP2 | |||
}} | }} |
Latest revision as of 22:31, 18 September 2015
Short description: | p4@ASAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ASAP2_5end |
Coexpression cluster: | C2706_amniotic_Small_Amniotic_Placental_mesothelioma_papillotubular_Smooth |
Association with transcript: | 109bp_to_ENST00000281419, ENST00000315273, NM_001135191, NM_003887, uc002qzh.2, uc002qzi.2_5end |
EntrezGene: | ASAP2 |
HGNC: | 2721 |
UniProt: | O43150 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.87e-11 | 253 |
extraembryonic cell | 1.84e-08 | 19 |
embryonic cell | 2.44e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.63e-08 | 7 |
systemic artery | 2.13e-07 | 33 |
systemic arterial system | 2.13e-07 | 33 |
extraembryonic membrane | 2.63e-07 | 14 |
membranous layer | 2.63e-07 | 14 |
somatic layer of lateral plate mesoderm | 4.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.16e-08 | 143 |