FFCP PHASE1:Hg19::chr3:107938309..107938325,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:107938309..107938325,-
|short_description=p5@IFT57
|description=CAGE_peak_5_at_IFT57_5end
|association_with_transcript=65bp_to_ENST00000485979_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55081 | |EntrezGene=55081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17367 | |HGNC=17367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_ENST00000485979_5end | |||
|cluster_id=chr3:107938309..107938325,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_5_at_IFT57_5end | |||
|id=chr3:107938309..107938325,- | |||
|ontology_enrichment_celltype=CL:0000945!7.60e-17!24;CL:0000826!7.60e-17!24;CL:0000236!8.46e-14!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.59e-82;13!CL:0000945;4.82e-68;24!CL:0000542;2.45e-26;53!CL:0000785;5.70e-09;1!CL:0000819;5.70e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.49e-76,14;CL:0000945,6.45e-68,24;CL:0000826,6.45e-68,24;CL:0000542,2.16e-33,53;CL:0000051,2.16e-33,53;CL:0000838,7.22e-30,52;CL:0002087,1.29e-13,115;CL:0002031,3.20e-11,120;CL:0000738,4.62e-11,136;CL:0002032,3.34e-10,161;CL:0000837,3.34e-10,161;CL:0000037,1.20e-09,168;CL:0000988,5.38e-09,177;CL:0000819,5.70e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.45e-26;53!UBERON:0001045;1.32e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.70e-09;1!DOID:8675;5.70e-09;1!DOID:12603;1.32e-08;1!DOID:0060058;2.69e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.70e-09,1;DOID:8675,5.70e-09,1;DOID:12603,1.13e-08,1;DOID:0060058,3.00e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.32e-08;1!UBERON:0001154;1.32e-08;1!UBERON:0001153;1.32e-08;1!UBERON:0009854;1.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,8.36e-09,1;UBERON:0001153,8.36e-09,1;UBERON:0001045,8.36e-09,1;UBERON:0000029,1.05e-08,1 | |||
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| ||
|short_description=p5@IFT57 | |||
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Latest revision as of 11:09, 19 September 2015
Short description: | p5@IFT57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IFT57_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 65bp_to_ENST00000485979_5end |
EntrezGene: | IFT57 |
HGNC: | 17367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.49e-76 | 14 |
lymphocyte of B lineage | 6.45e-68 | 24 |
pro-B cell | 6.45e-68 | 24 |
lymphocyte | 2.16e-33 | 53 |
common lymphoid progenitor | 2.16e-33 | 53 |
lymphoid lineage restricted progenitor cell | 7.22e-30 | 52 |
nongranular leukocyte | 1.29e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 3.20e-11 | 120 |
leukocyte | 4.62e-11 | 136 |
hematopoietic oligopotent progenitor cell | 3.34e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.34e-10 | 161 |
hematopoietic stem cell | 1.20e-09 | 168 |
hematopoietic cell | 5.38e-09 | 177 |
B-1 B cell | 5.70e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 8.36e-09 | 1 |
caecum | 8.36e-09 | 1 |
midgut | 8.36e-09 | 1 |
lymph node | 1.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.70e-09 | 1 |
lymphosarcoma | 5.70e-09 | 1 |
acute leukemia | 1.13e-08 | 1 |
lymphoma | 3.00e-07 | 10 |