FFCP PHASE1:Hg19::chr3:111451321..111451372,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:111451321..111451372,+
|short_description=p3@PHLDB2
|description=CAGE_peak_3_at_PHLDB2_5end
|association_with_transcript=0bp_to_ENST00000359729,ENST0000039...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90102 | |EntrezGene=90102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29573 | |HGNC=29573 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SQ0 | |UniProt=Q86SQ0 | ||
|association_with_transcript=0bp_to_ENST00000359729,ENST00000393923,NM_001134437,uc003dyc.2_5end | |||
|cluster_id=chr3:111451321..111451372,+ | |||
|coexpression_cluster_id=C4264 | |||
|description=CAGE_peak_3_at_PHLDB2_5end | |||
|id=chr3:111451321..111451372,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.07e-26!254;CL:0000223!4.84e-26!59;CL:0002076!7.22e-22!43;CL:0002368!4.07e-14!13;CL:0002202!8.46e-10!9;CL:0002632!8.46e-10!9;CL:0002251!3.57e-08!21;CL:0000181!8.51e-07!12;CL:0000417!8.51e-07!12;CL:0000668!8.51e-07!12;CL:0000414!8.51e-07!12;CL:0000412!8.51e-07!12;CL:0000182!8.51e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.66e-21;42!CL:0002368;3.83e-19;13!CL:0002202;4.35e-13;9!CL:0002632;4.35e-13;9!CL:0002251;6.55e-10;20!CL:0000182;2.12e-09;12!CL:0000244;8.87e-08;4!CL:0000731;8.87e-08;4!CL:0002159;9.11e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.16e-33,58;CL:0000066,1.03e-26,253;CL:0002076,2.08e-26,42;CL:0002368,3.64e-19,13;CL:0002202,4.14e-13,9;CL:0002632,4.14e-13,9;CL:0002251,6.77e-10,20;CL:0000182,1.97e-09,12;CL:0000244,8.81e-08,4;CL:0000731,8.81e-08,4;CL:0002159,9.66e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;3.27e-18;58!UBERON:0001041;6.83e-14;30!UBERON:0009497;1.95e-12;13!UBERON:0004161;5.33e-10;11!UBERON:0006595;6.11e-09;86!UBERON:0003104;1.09e-07;31 | |||
|ontology_enrichment_disease=DOID:305!4.46e-15!106;DOID:1749!2.47e-11!14;DOID:0050687!1.31e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.05e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.61e-14,106;DOID:1749,1.05e-13,14;DOID:0050687,1.03e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.46e-24!169;UBERON:0000925!3.46e-24!169;UBERON:0006595!3.46e-24!169;UBERON:0005911!6.57e-20!82;UBERON:0001007!1.15e-19!155;UBERON:0001555!1.15e-19!155;UBERON:0007026!1.15e-19!155;UBERON:0004921!1.87e-18!129;UBERON:0004185!1.87e-18!129;UBERON:0005177!1.57e-16!107;UBERON:0000466!2.26e-15!126;UBERON:0000077!1.00e-14!130;UBERON:0001041!3.77e-13!98;UBERON:0009569!3.99e-12!113;UBERON:0001008!5.68e-12!45;UBERON:0001004!1.26e-11!72;UBERON:0006554!2.32e-11!44;UBERON:0005172!6.16e-11!55;UBERON:0005173!6.16e-11!55;UBERON:0007499!6.43e-11!25;UBERON:0003929!1.38e-10!54;UBERON:0000481!1.68e-10!347;UBERON:0009856!2.87e-10!26;UBERON:0009497!3.82e-10!25;UBERON:0000015!3.82e-10!25;UBERON:0002423!3.82e-10!25;UBERON:0006235!3.82e-10!25;UBERON:0004161!3.82e-10!25;UBERON:0000062!4.43e-10!511;UBERON:0000475!1.56e-09!365;UBERON:0000464!2.66e-09!104;UBERON:0000344!2.70e-09!12;UBERON:0002417!6.29e-09!61;UBERON:0000916!6.29e-09!61;UBERON:0000065!7.32e-09!53;UBERON:0000161!8.00e-09!35;UBERON:0008835!1.66e-08!22;UBERON:0003894!1.66e-08!22;UBERON:0000058!1.87e-08!26;UBERON:0003104!1.97e-08!238;UBERON:0009142!1.97e-08!238;UBERON:0005178!3.50e-08!34;UBERON:0002224!3.50e-08!34;UBERON:0002365!3.84e-08!31;UBERON:0002330!3.84e-08!31;UBERON:0007023!3.91e-08!115;UBERON:0009854!6.17e-08!23;UBERON:0005181!8.89e-08!35;UBERON:0000922!2.00e-07!612;UBERON:0004111!2.35e-07!241;UBERON:0000064!2.81e-07!219;UBERON:0003064!3.50e-07!37;UBERON:0000365!3.89e-07!5;UBERON:0005153!3.94e-07!37;UBERON:0003729!4.23e-07!5;UBERON:0000489!4.44e-07!32;UBERON:0002048!4.58e-07!22;UBERON:0000117!4.58e-07!22;UBERON:0000171!4.58e-07!22;UBERON:0000170!4.58e-07!22;UBERON:0005597!4.58e-07!22;UBERON:0000118!4.58e-07!22;UBERON:0000468!6.00e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;4.40e-11;36!UBERON:0006554;5.64e-11;30!UBERON:0001008;5.64e-11;30!UBERON:0002423;1.38e-10;25!UBERON:0000344;3.98e-10;20!UBERON:0002365;6.03e-10;31!UBERON:0002330;6.03e-10;31!UBERON:0005178;1.31e-09;34!UBERON:0002224;1.31e-09;34!UBERON:0005181;2.01e-09;35!UBERON:0000365;2.21e-09;5!UBERON:0004807;3.52e-09;22!UBERON:0002048;4.26e-09;22!UBERON:0000117;4.26e-09;22!UBERON:0000171;4.26e-09;22!UBERON:0000170;4.26e-09;22!UBERON:0007196;1.72e-08;15!UBERON:0001558;1.72e-08;15!UBERON:0000486;3.88e-08;12!UBERON:0002107;4.61e-08;19!UBERON:0006925;4.61e-08;19!UBERON:0003343;5.00e-08;4!UBERON:0004785;5.00e-08;4!UBERON:0000058;5.47e-08;10!UBERON:0005910;1.08e-07;6!UBERON:0000065;1.84e-07;44!UBERON:0003729;2.39e-07;13!UBERON:0003350;2.66e-07;8!UBERON:0001007;2.86e-07;81!UBERON:0005177;5.81e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.16e-31,160;UBERON:0000925,4.16e-31,160;UBERON:0006595,4.16e-31,160;UBERON:0001007,1.51e-25,145;UBERON:0001555,1.51e-25,145;UBERON:0007026,1.51e-25,145;UBERON:0005911,1.69e-25,82;UBERON:0004921,1.49e-24,118;UBERON:0005177,3.18e-21,101;UBERON:0001041,1.09e-16,87;UBERON:0007499,3.12e-14,25;UBERON:0001004,6.86e-14,74;UBERON:0009569,9.33e-14,112;UBERON:0009856,1.71e-13,26;UBERON:0003929,9.47e-13,54;UBERON:0001008,3.06e-12,48;UBERON:0006554,1.74e-11,47;UBERON:0005178,2.27e-11,34;UBERON:0002224,2.27e-11,34;UBERON:0005181,6.78e-11,35;UBERON:0008835,6.85e-11,22;UBERON:0003894,6.85e-11,22;UBERON:0005172,9.37e-11,54;UBERON:0005173,9.37e-11,54;UBERON:0011216,9.43e-11,223;UBERON:0009497,1.40e-10,25;UBERON:0000015,1.40e-10,25;UBERON:0002423,1.40e-10,25;UBERON:0006235,1.40e-10,25;UBERON:0004161,1.40e-10,25;UBERON:0000065,2.43e-10,54;UBERON:0009854,2.98e-10,23;UBERON:0000344,4.08e-10,20;UBERON:0002365,5.00e-10,31;UBERON:0002330,5.00e-10,31;UBERON:0000365,2.20e-09,5;UBERON:0005153,3.81e-09,37;UBERON:0002100,3.86e-09,199;UBERON:0002048,4.34e-09,22;UBERON:0000117,4.34e-09,22;UBERON:0000171,4.34e-09,22;UBERON:0000170,4.34e-09,22;UBERON:0005597,4.34e-09,22;UBERON:0000118,4.34e-09,22;UBERON:0002417,5.20e-09,60;UBERON:0000916,5.20e-09,60;UBERON:0004807,7.94e-09,28;UBERON:0000161,9.34e-09,36;UBERON:0007196,1.59e-08,15;UBERON:0001558,1.59e-08,15;UBERON:0002530,1.86e-08,59;UBERON:0002107,4.35e-08,19;UBERON:0006925,4.35e-08,19;UBERON:0008836,4.35e-08,19;UBERON:0003343,5.05e-08,4;UBERON:0004785,5.05e-08,4;UBERON:0005157,7.15e-08,47;UBERON:0005910,1.08e-07,6;UBERON:0008947,1.81e-07,38;UBERON:0003258,1.81e-07,38;UBERON:0003729,2.45e-07,13;UBERON:0003350,2.73e-07,8;UBERON:0000489,3.58e-07,31 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0.261185628199839,24.5733936501509,12.5604210235037,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,21.1466881630153,7.53014796945625,11.8321283253372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.43917392846563,12.7049703232781,2.5500670180478,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6993858771312,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.9980415264323,15.5465288736776,9.17774705244812,0,0,0.580969714347592,0.829288440122964,1.26160425437814,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,64.6450677591337,25.5535076336183,31.3118650541144,0,68.3815718299711,0,2.30475599358114,1.1240175325762,0,17.128862354328,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,12.185398418281,26.5411762554198,5.67100388969546,0,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.5523743325651,90.2279116364782,31.3996172271406,0,0,0,1.80479845162965,7.70153371044148,0.784349769176855,0,8.12747542475143,0,0,0,0,0.541892875087706,1.50506932156456,3.3133915495855,0.831076008928724,2.46262230194396,0,0,0,0,0,43.9985119735774,0,0,18.9507627538737,6.50060246036521,0,0,0,0,0,0,0,0,0,64.4611169907815,34.0176419236238,243.86789357715,16.7921916220213,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,21.1688647996127,18.768463715002,8.71127878890581,45.0948805720772,39.6064942857532,38.7484394035539,34.5875519758607,83.8490410755402,0,0,0,0,0,0,0,0,0,0,24.7490618140842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.2589570676698,0,5.64232893582013,0.614321404198464,0,0,0,0,0,0,0,76.3356225998456,0.511343412510774,0,0,48.0795678638199,2.50629644545853,0,8.58197629041323,0,0,1.93866549219044,0.185536196323703,0,0.520855522170466,0,0,51.6622255216168,2.54253650292766,0,0,0,0,0,0,0,0,0,0.438770794307945,0,63.0195324139287,0.384751292518985,0,2.76676685265672,0.0897576444097721,0,0,4.76307485689684,2.13213910407454,0,0,0,0,0,0,0,0,13.5038761297937,49.2963080640626,27.2811427867506,0,1.99052386215701,1.50377859655677,2.4441205797345,0,0,0,0.067401132980677,0,0.234264445725339,0,16.4358279902955,0,1.97292201424695,4.83962864194656,0,0.189559738885464,0,0,0,0,0,0,31.8762691553368,0.416024019039416,0,94.1706939152169,0.522355239482415,2.27144668714639,0,0,0,0,1.74580229679155,0,0.451961481561065,0,0,0.126621591911757,0.391102765469606,0.480952921509202,6.83049583165928,0,0.576361668616424,0,26.7688196664665,0,0,1.41416420770077,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0.399358000997982,0.429226048136571,0.446342914883745,0,0,16.3094329338435,10.7145127937824,10.878893306314,10.919374104378,30.3156643065426,0,0,0,0.160753148465019,0,0,0,0,0,15.094560941967,47.4410357941173,28.692659709844,0,0,14.0098094043195,0,0.662091970365432,0,0,0,0,0,0,0,0,41.6208343645754,14.5757577803443,1.0342636508924,0.92562821219883,2.05304205461195,0,12.8144895081234,14.1483874589699,9.5274982729855,0,0,0,125.114886522956,0,0,0,0,0,0,0,0,0,1.10929051536852,0.558867626472451,0,18.4971003783918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.1168925707603,0,0,0,0,0,0,0,1.2288645437686,36.7683094644011,0,0,0,0,0,10.7707220943972,21.1506268411211,0,0,0,0,0,0,0,0,0,0,9.60684897942564,0,0,0.0642292250964595,1.41696576325585,0,0,0,0.138314504928436,0,0,162.041883245193,26.3072483065461,59.0640087239806,127.540335429973,0,0,0,0,0,10.1596821460302,0,0,1.03499260351932,0,0,0,0,0,1.64477330057155,1.98484471355718,0,26.0635352384774,0,0,0,0,0.266107110487916,0,1.71488009437418,1.56330385846713,0.131545547125698,0,0.778619813244484,4.86657175673187,0,0,0,37.1395456896029,5.25526856675755,0.142953088353313,0.316027223465453,0,0,0,0.207216164163037,0,0,4.30227358820278,0,0,1.27016115057279,0.22910686854405,0,0,29.4179785628194,0,0,0,0,0,0,0,0.198950775161368,0,0,0.549702583727146,41.8167076679686,1.00326405540328,1.96703604453562,1.41095188908457,1.47088993052343,0.235676547101626,0.196308467114945,0,0,0,0,0.193373663920732,0,42.4958373881465,15.8802692272061,0,5.11235471772562,2.75237570042724,0.143339583151451,0,0,0,11.1095636508234,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0.23806443146374,2.32520075409622,9.24913243008283,0,0,0,0.870866991587845,0,0.404112318087525,1.64961072403156,0,57.552110907959,0,0,0,2.34640942403454,0.122241444182866,0.81379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| ||
|short_description=p3@PHLDB2 | |||
}} | }} |
Latest revision as of 12:47, 19 September 2015
Short description: | p3@PHLDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHLDB2_5end |
Coexpression cluster: | C4264_Small_oral_malignant_Prostate_epidermoid_argyrophil_Urothelial |
Association with transcript: | 0bp_to_ENST00000359729, ENST00000393923, NM_001134437, uc003dyc.2_5end |
EntrezGene: | PHLDB2 |
HGNC: | 29573 |
UniProt: | Q86SQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.16e-33 | 58 |
epithelial cell | 1.03e-26 | 253 |
endo-epithelial cell | 2.08e-26 | 42 |
respiratory epithelial cell | 3.64e-19 | 13 |
epithelial cell of tracheobronchial tree | 4.14e-13 | 9 |
epithelial cell of lower respiratory tract | 4.14e-13 | 9 |
epithelial cell of alimentary canal | 6.77e-10 | 20 |
hepatocyte | 1.97e-09 | 12 |
transitional epithelial cell | 8.81e-08 | 4 |
urothelial cell | 8.81e-08 | 4 |
general ecto-epithelial cell | 9.66e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.61e-14 | 106 |
squamous cell carcinoma | 1.05e-13 | 14 |
cell type cancer | 1.03e-08 | 143 |