FFCP PHASE1:Hg19::chr3:1134366..1134376,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:1134366..1134376,+
|short_description=p8@CNTN6
|description=CAGE_peak_8_at_CNTN6_5end
|association_with_transcript=21bp_to_ENST00000350110_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27255 | |EntrezGene=27255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2176 | |HGNC=2176 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQ52 | |UniProt=Q9UQ52 | ||
|association_with_transcript=21bp_to_ENST00000350110_5end | |||
|cluster_id=chr3:1134366..1134376,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_8_at_CNTN6_5end | |||
|id=chr3:1134366..1134376,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;2.19e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.09e-23;3 | |||
|ontology_enrichment_disease=DOID:3371!1.46e-07!1;DOID:4549!1.46e-07!1;DOID:5861!1.46e-07!1;DOID:6496!1.46e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.51e-48!57;UBERON:0005068!8.51e-48!57;UBERON:0006241!8.51e-48!57;UBERON:0007135!8.51e-48!57;UBERON:0002616!4.82e-46!59;UBERON:0002346!4.43e-44!90;UBERON:0003075!7.54e-43!86;UBERON:0007284!7.54e-43!86;UBERON:0000955!3.65e-38!69;UBERON:0006238!3.65e-38!69;UBERON:0005743!6.67e-36!86;UBERON:0000073!5.73e-35!94;UBERON:0001016!5.73e-35!94;UBERON:0001017!1.36e-34!82;UBERON:0002780!1.29e-31!41;UBERON:0001890!1.29e-31!41;UBERON:0006240!1.29e-31!41;UBERON:0003080!8.38e-31!42;UBERON:0003056!2.92e-29!61;UBERON:0007023!4.28e-26!115;UBERON:0000033!7.63e-26!123;UBERON:0001950!3.09e-25!20;UBERON:0001893!7.65e-25!34;UBERON:0002020!8.31e-25!34;UBERON:0003528!8.31e-25!34;UBERON:0000153!2.04e-24!129;UBERON:0007811!2.04e-24!129;UBERON:0004733!4.95e-23!12;UBERON:0002028!4.95e-23!12;UBERON:0007277!4.95e-23!12;UBERON:0002619!6.86e-23!22;UBERON:0001869!1.35e-22!32;UBERON:0000924!7.35e-22!173;UBERON:0006601!7.35e-22!173;UBERON:0002791!1.19e-21!33;UBERON:0004732!3.40e-21!13;UBERON:0004121!1.06e-20!169;UBERON:0000956!4.79e-20!25;UBERON:0000203!4.79e-20!25;UBERON:0003076!2.96e-18!15;UBERON:0003057!2.96e-18!15;UBERON:0000988!5.66e-18!3;UBERON:0002298!8.11e-18!8;UBERON:0002680!2.76e-16!9;UBERON:0001895!2.76e-16!9;UBERON:0010092!2.76e-16!9;UBERON:0002148!2.72e-12!2;UBERON:0009662!2.72e-12!2;UBERON:0002021!5.01e-11!5;UBERON:0000025!8.11e-11!194;UBERON:0000483!6.56e-10!309;UBERON:0000119!9.28e-10!312;UBERON:0000200!3.13e-09!6;UBERON:0001896!1.50e-08!3;UBERON:0005290!1.50e-08!3;UBERON:0010096!1.50e-08!3;UBERON:0006331!1.75e-08!3;UBERON:0001894!2.65e-08!7;UBERON:0006222!2.65e-08!7;UBERON:0000477!3.11e-08!286;UBERON:0000064!5.44e-08!219;UBERON:0004111!8.59e-08!241;UBERON:0007190!2.37e-07!1;UBERON:0001882!2.52e-07!1;UBERON:0005403!2.52e-07!1;UBERON:0000481!2.59e-07!347;UBERON:0002022!4.57e-07!1;UBERON:0001871!5.17e-07!7;UBERON:0002902!9.18e-07!1;UBERON:0009899!9.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0002021;1.60e-14;5!UBERON:0002037;2.74e-12;6!UBERON:0002680;1.21e-08;9!UBERON:0001895;1.21e-08;9!UBERON:0004733;8.38e-07;12!UBERON:0002028;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0002021,1.60e-14,5;UBERON:0002037,2.74e-12,6;UBERON:0006215,2.74e-12,6;UBERON:0002680,1.21e-08,9;UBERON:0001895,1.21e-08,9;UBERON:0010092,1.21e-08,9;UBERON:0004733,8.38e-07,12;UBERON:0002028,8.38e-07,12;UBERON:0007277,8.38e-07,12 | |||
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|short_description=p8@CNTN6 | |||
}} | }} |
Latest revision as of 15:59, 19 September 2015
Short description: | p8@CNTN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CNTN6_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 21bp_to_ENST00000350110_5end |
EntrezGene: | CNTN6 |
HGNC: | 2176 |
UniProt: | Q9UQ52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
occipital lobe | 1.60e-14 | 5 |
cerebellum | 2.74e-12 | 6 |
rhombic lip | 2.74e-12 | 6 |
regional part of metencephalon | 1.21e-08 | 9 |
metencephalon | 1.21e-08 | 9 |
future metencephalon | 1.21e-08 | 9 |
segmental subdivision of hindbrain | 8.38e-07 | 12 |
hindbrain | 8.38e-07 | 12 |
presumptive hindbrain | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |