FFCP PHASE1:Hg19::chr3:1134400..1134417,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:1134400..1134417,+
|short_description=p3@CNTN6
|description=CAGE_peak_3_at_CNTN6_5end
|association_with_transcript=0bp_to_ENST00000413210_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27255 | |EntrezGene=27255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2176 | |HGNC=2176 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWS7 | |UniProt=F8VWS7 | ||
|association_with_transcript=0bp_to_ENST00000413210_5end | |||
|cluster_id=chr3:1134400..1134417,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_3_at_CNTN6_5end | |||
|id=chr3:1134400..1134417,+ | |||
|ontology_enrichment_celltype=CL:0000306!5.13e-07!4;CL:0002222!5.13e-07!4;CL:0002224!5.13e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.13e-11;4!CL:0002222;2.13e-11;4!CL:0002224;2.13e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.07e-11,4;CL:0002222,3.07e-11,4;CL:0002224,3.07e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.20e-32;3!UBERON:0006222;8.62e-12;1!UBERON:0006601;1.14e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.62e-12;1!DOID:4549;2.62e-12;1!DOID:5861;2.62e-12;1!DOID:6496;2.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.63e-12,1;DOID:4549,2.63e-12,1;DOID:5861,2.63e-12,1;DOID:6496,2.63e-12,1 | |||
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| ||
|short_description=p3@CNTN6 | |||
}} | }} |
Latest revision as of 15:59, 19 September 2015
Short description: | p3@CNTN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNTN6_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_ENST00000413210_5end |
EntrezGene: | CNTN6 |
HGNC: | 2176 |
UniProt: | F8VWS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.07e-11 | 4 |
vertebrate lens cell | 3.07e-11 | 4 |
lens epithelial cell | 3.07e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.63e-12 | 1 |
extraosseous chondrosarcoma | 2.63e-12 | 1 |
myxoid chondrosarcoma | 2.63e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 2.63e-12 | 1 |