FFCP PHASE1:Hg19::chr3:142607913..142607931,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:142607913..142607931,-
|short_description=p3@PCOLCE2
|description=CAGE_peak_3_at_PCOLCE2_5end
|association_with_transcript=2bp_to_uc003evd.2_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26577 | |EntrezGene=26577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8739 | |HGNC=8739 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc003evd.2_5end | |||
|cluster_id=chr3:142607913..142607931,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_PCOLCE2_5end | |||
|id=chr3:142607913..142607931,- | |||
|ontology_enrichment_celltype=CL:0000055!2.41e-12!180;CL:0000136!4.31e-11!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.62e-16;13!CL:0000153;2.57e-08;9!CL:0000447;2.57e-08;9!CL:0000359;3.58e-08;32!CL:0002334;1.02e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.57e-19,15;CL:0000359,1.12e-08,32;CL:0000153,2.68e-08,9;CL:0000447,2.68e-08,9;CL:0002334,9.87e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.86e-10!27;UBERON:0000948!4.49e-08!24;UBERON:0005498!4.49e-08!24;UBERON:0004140!4.49e-08!24;UBERON:0009881!4.49e-08!24;UBERON:0004141!4.49e-08!24;UBERON:0003084!4.49e-08!24;UBERON:0007005!4.49e-08!24;UBERON:0004139!4.49e-08!24;UBERON:0004291!4.49e-08!24;UBERON:0003103!5.56e-07!69;UBERON:0007023!8.16e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.01e-11;25!UBERON:0004573;1.51e-09;33!UBERON:0004571;1.51e-09;33!UBERON:0000948;2.41e-08;22!UBERON:0001637;3.18e-08;42!UBERON:0003509;3.18e-08;42!UBERON:0004572;3.18e-08;42!UBERON:0003135;5.18e-08;11!UBERON:0004457;7.01e-08;9!UBERON:0000042;7.01e-08;9!UBERON:0001013;3.45e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.69e-12,27;UBERON:0004573,6.22e-11,33;UBERON:0004571,6.22e-11,33;UBERON:0001637,1.59e-10,42;UBERON:0003509,1.59e-10,42;UBERON:0004572,1.59e-10,42;UBERON:0004872,3.07e-10,83;UBERON:0004797,3.29e-10,7;UBERON:0007500,1.57e-09,59;UBERON:0001981,1.57e-09,59;UBERON:0004537,1.57e-09,59;UBERON:0006965,1.57e-09,59;UBERON:0007023,2.82e-09,114;UBERON:0000948,9.78e-09,24;UBERON:0005498,9.78e-09,24;UBERON:0004140,9.78e-09,24;UBERON:0009881,9.78e-09,24;UBERON:0004141,9.78e-09,24;UBERON:0003084,9.78e-09,24;UBERON:0007005,9.78e-09,24;UBERON:0004139,9.78e-09,24;UBERON:0004291,9.78e-09,24;UBERON:0003135,7.83e-08,11;UBERON:0003103,8.91e-08,68;UBERON:0000055,2.48e-07,68;UBERON:0001013,3.32e-07,14 | |||
|phase1_expression=10.1739892391512,30.8304754403016,23.3984310799312,13.009528785907,45.1430705371561,6.10636966870258,0,8.2123583545488,7.05201196139564,0,0,0,0,0.247532705920093,0.662794751455832,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,12.6503703334598,6.01605492763067,10.8634889220618,22.2680065174308,83.7011976920534,0.0945348171640679,0,0.263504357079378,1.44076983047484,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,5.82500353657067,1.98613771219828,5.73673241497627,4.25602058638028,0.560677600142307,0,0.24666754841716,0.933633106199299,0,0.326923806226917,0,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0,0.211931901159562,2.10063767259082,0.721367704669072,0.772921620136887,2.60563598864226,6.41350062516812,7.0154643716063,0.252433774244115,0.276149695926898,0.969876340912871,1.42003837006646,1.20902517873168,0.847802961552438,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.337169380156203,1.20505514941741,0.220587945464788,0.435758888184812,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0,0,0.285826432630578,0.336393253036082,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0.301439377059586,0.871533458600294,0.499864955910285,0,0.502257091432126,0,0.958499421966331,0,5.70547620162874,28.5219174135131,1.64381058040307,0.895304816199478,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,4.21783273291921,1.38115775959256,2.52594084989766,3.33161788064823,2.55853624533352,0.482561763430822,4.45254199334973,0.771048469013278,8.87808626565635,7.39144404124282,0,9.87788216909654,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,1.95777922130672,1.00726411300178,0.742585499285292,0,0,0,0.096670718292122,0.462145851343933,0.767518373630648,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,6.92587163027408,4.1822236209636,2.46426864140871,5.32306030317022,4.34966496037536,0.37064843820784,1.43124886741991,0.372158369359667,0,0,0,0,1.59101623962968,0,0,0,0,5.45892700247953,4.75530963519025,4.21258456238981,0,5.84912375115083,0,0.136499911407986,0,11.3008116620243,1.10273068709225,5.97095077717098,3.94605796728386,0,0,0.202910376962704,2.78841148289775,1.40847801266121,0,0,0,0,97.5317275075208,40.8325667270278,0,0,0,0.670302275535787,1.08890984861323,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0.432807638929335,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,21.9762268907841,0.242721043499027,0,0.284136146806413,0,0,0,0,0.140669416410513,0.222617410045812,1.81284261649436,0,25.3044945078859,0.828851746593443,0,0,0,0.622079175323615,0,0,0,29.3957348798062,0,3.33410970433911,0,0,0,0,0,21.7499872630438,1.137934482855,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,4.46311499322023,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,6.96683351754953,2.38835424159016,1.22206028986725,0,0,0,0.134802265961354,6.42062117839031,0,0,0,0,10.6537788769335,0,0.91821828489147,0.821425535170343,0.901940516486955,1.14057010536972,0,0,0,0,0,0,0,0,0,3.4945333648406,3.26773461696071,0.19351266257817,0.365446585430928,1.14961639874493,17.9429680503576,0,4.29363407483012,0,0.19871461170299,0,0.195551382734803,0.561111741760736,4.26905989478705,0,0.144090417154106,0.458146384663663,0,0,0.248505071130865,0,0.407712618220842,0.313808538937,0,0.577901179803038,0,0,0,0,0,113.94721971908,40.3322346260563,150.035462136554,7.78748101946065,14.5936856366434,55.1233499881425,3.09043973438941,0.720599767084807,0,0.0787831823072236,0,0,0.0984274815147488,0,0.795229689809303,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0,0.86686278029118,0.314727528809989,0,0.35857467866569,0,20.7261644648276,39.7255182219259,0,17.3759872561188,0,2.28611152076586,0,0.246277562248017,1.70388021785422,0.113312091520126,0,1.32506888912221,0.258565912723101,0,0.342173675768659,0,1.70859860108311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| ||
|short_description=p3@PCOLCE2 | |||
}} | }} |
Latest revision as of 05:00, 25 September 2015
Short description: | p3@PCOLCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCOLCE2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 2bp_to_uc003evd.2_5end |
EntrezGene: | PCOLCE2 |
HGNC: | 8739 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.57e-19 | 15 |
vascular associated smooth muscle cell | 1.12e-08 | 32 |
GAG secreting cell | 2.68e-08 | 9 |
carbohydrate secreting cell | 2.68e-08 | 9 |
preadipocyte | 9.87e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.69e-12 | 27 |
systemic artery | 6.22e-11 | 33 |
systemic arterial system | 6.22e-11 | 33 |
artery | 1.59e-10 | 42 |
arterial blood vessel | 1.59e-10 | 42 |
arterial system | 1.59e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 3.07e-10 | 83 |
blood vessel layer | 3.29e-10 | 7 |
epithelial tube open at both ends | 1.57e-09 | 59 |
blood vessel | 1.57e-09 | 59 |
blood vasculature | 1.57e-09 | 59 |
vascular cord | 1.57e-09 | 59 |
adult organism | 2.82e-09 | 114 |
heart | 9.78e-09 | 24 |
primitive heart tube | 9.78e-09 | 24 |
primary heart field | 9.78e-09 | 24 |
anterior lateral plate mesoderm | 9.78e-09 | 24 |
heart tube | 9.78e-09 | 24 |
heart primordium | 9.78e-09 | 24 |
cardiac mesoderm | 9.78e-09 | 24 |
cardiogenic plate | 9.78e-09 | 24 |
heart rudiment | 9.78e-09 | 24 |
male reproductive organ | 7.83e-08 | 11 |
compound organ | 8.91e-08 | 68 |
vessel | 2.48e-07 | 68 |
adipose tissue | 3.32e-07 | 14 |