FFCP PHASE1:Hg19::chr3:156878415..156878435,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:156878415..156878435,-
|short_description=p9@CCNL1
|description=CAGE_peak_9_at_CCNL1_5end
|association_with_transcript=46bp_to_ENST00000295925,NM_020307,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57018 | |EntrezGene=57018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20569 | |HGNC=20569 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UK58 | |UniProt=Q9UK58 | ||
|association_with_transcript=46bp_to_ENST00000295925,NM_020307,uc003fbd.1,uc003fbf.2,uc003fbg.2,uc003fbi.1,uc011bor.1_5end | |||
|cluster_id=chr3:156878415..156878435,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_9_at_CCNL1_5end | |||
|id=chr3:156878415..156878435,- | |||
|ontology_enrichment_celltype=CL:0002057!7.68e-21!42;CL:0000860!7.76e-21!45;CL:0002009!2.03e-14!65;CL:0000557!4.58e-13!71;CL:0002194!5.36e-13!63;CL:0000576!5.36e-13!63;CL:0000040!5.36e-13!63;CL:0000559!5.36e-13!63;CL:0000766!3.33e-12!76;CL:0000048!3.55e-12!430;CL:0000034!1.22e-11!444;CL:0000723!1.67e-11!436;CL:0000839!2.07e-11!70;CL:0000134!1.70e-08!358;CL:0002320!1.92e-08!365;CL:0002087!3.21e-08!119;CL:0000738!3.61e-08!140;CL:0002031!3.89e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.86e-19;33!CL:0002057;1.86e-19;33!CL:0000473;5.22e-13;39!CL:0000234;5.22e-13;39!CL:0002580;4.30e-12;3!CL:0002334;3.07e-11;12!CL:0000136;8.10e-11;13!CL:1000306;1.46e-09;4!CL:0002547;1.46e-09;4!CL:0000576;3.38e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.58e-14,42;CL:0002057,1.58e-14,42;CL:0000473,2.55e-12,48;CL:0000234,2.55e-12,48;CL:0002580,5.97e-12,3;CL:0002334,3.60e-11,12;CL:0000034,6.51e-11,441;CL:0000048,8.25e-11,427;CL:0000723,1.62e-10,433;CL:0002009,2.29e-10,61;CL:0000134,6.35e-10,354;CL:1000306,1.13e-09,4;CL:0002547,1.13e-09,4;CL:0002320,1.50e-09,361;CL:0002194,3.03e-09,59;CL:0000576,3.03e-09,59;CL:0000040,3.03e-09,59;CL:0000559,3.03e-09,59;CL:0000136,3.27e-09,15;CL:0000557,3.67e-09,67;CL:0000766,2.54e-08,72;CL:0000219,3.05e-08,386;CL:0000839,5.70e-08,66 | |||
|ontology_enrichment_development_v019=CL:0002057;3.80e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.87e-14!167;UBERON:0002371!6.34e-13!80;UBERON:0001474!6.87e-12!86;UBERON:0004765!2.52e-10!101;UBERON:0001434!2.52e-10!101;UBERON:0002390!1.43e-09!102;UBERON:0003061!1.43e-09!102;UBERON:0002193!1.40e-08!112;UBERON:0002405!1.76e-08!115;UBERON:0002384!3.09e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.55e-11;9!UBERON:0000042;3.55e-11;9!UBERON:0004797;1.46e-09;4!UBERON:0000415;1.46e-09;4!UBERON:0007240;1.46e-09;4!UBERON:0005742;1.46e-09;4!UBERON:0005734;1.46e-09;4!UBERON:0004664;1.46e-09;4!UBERON:0004663;1.46e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.36e-10,76;UBERON:0000415,1.13e-09,4;UBERON:0007240,1.13e-09,4;UBERON:0005742,1.13e-09,4;UBERON:0005734,1.13e-09,4;UBERON:0004664,1.13e-09,4;UBERON:0004663,1.13e-09,4;UBERON:0004797,1.61e-09,7;UBERON:0001474,3.45e-09,82;UBERON:0001434,4.44e-09,100;UBERON:0002384,4.82e-09,371;UBERON:0002204,5.86e-09,167;UBERON:0004457,2.98e-08,12;UBERON:0000042,2.98e-08,12;UBERON:0004765,4.70e-08,90;UBERON:0002405,1.11e-07,93;UBERON:0000926,1.83e-07,315;UBERON:0004120,1.83e-07,315;UBERON:0006603,1.83e-07,315;UBERON:0003081,3.08e-07,203;UBERON:0002390,4.13e-07,98;UBERON:0003061,4.13e-07,98 | |||
|phase1_expression=1.09007027562334,0.642301571672949,3.10099689011137,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0,0.802177789880567,0.651032612147555,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,1.23882548358041,2.58923153089935,2.56160706529101,5.43909128743746,1.72372840368309,0.645484683583826,1.35426486594342,0.188242339542605,0,0.449446968890169,1.53041946185451,0.962787081228281,1.91801137739712,0.989553900560148,1.19678194572979,2.55734850319616,0.580418477257168,0,1.24564449799115,1.00499466102697,0.521482918420201,3.04064382587163,1.21079900526674,0,0.949387162322653,0.211255286311942,0,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0.443458794925128,0,0,0,0,0.324547393654683,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0.993943903390637,1.51956613997496,36.280115542822,2.86836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0,0.211931901159562,0,0,0.772921620136887,0,0,0.292311015483596,0.252433774244115,0,0.161646056818812,1.77504796258307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,2.17171960001369,0.821905290201534,0.537182889719687,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,3.96972492510043,1.2276957863045,1.12264037773229,4.35673107469383,0,2.0911009748669,2.96836132889982,0,0.177561725313127,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0.322260734604821,1.0151168573996,0.170453254832202,0,0,0,0.255225424989168,0,0.929691098594572,2.51849877464512,0,0,1.59691809095107,0,0,0.143124886741991,0,0,0,0,0,1.27281299170375,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0.7133421029625,0,2.53329162357197,5.92730807327823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,1.10513566212459,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.341826167541004,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0,0,0.783939179315021,0.174118413160805,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,6.46085722119133,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0,0,0.674921674654501,3.0952078182318,0,0,0,0.209818352539992,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,8.70428485391158,3.5096585163178,19.2997713360981,23.9347020418157,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,1.10961172300523,0.568209015825267,1.0062716070103,1.77962244319307,5.94984177832001,1.96600200892211,0.15543720058278,0.443565449968902,0,1.34940933649081,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0.363697318405119,0,0,1.59238355479446,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.41023272848151,0,0,0,0,0.294443155503077,0.235939446695481,0.183428598521679,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0,0.339854229375634,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,1.29787968637137,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.11213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| ||
|short_description=p9@CCNL1 | |||
}} | }} |
Latest revision as of 07:15, 16 September 2015
Short description: | p9@CCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCNL1_5end |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | 46bp_to_ENST00000295925, NM_020307, uc003fbd.1, uc003fbf.2, uc003fbg.2, uc003fbi.1, uc011bor.1_5end |
EntrezGene: | CCNL1 |
HGNC: | 20569 |
UniProt: | Q9UK58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.58e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-14 | 42 |
defensive cell | 2.55e-12 | 48 |
phagocyte | 2.55e-12 | 48 |
preadipocyte of the breast | 5.97e-12 | 3 |
preadipocyte | 3.60e-11 | 12 |
stem cell | 6.51e-11 | 441 |
multi fate stem cell | 8.25e-11 | 427 |
somatic stem cell | 1.62e-10 | 433 |
macrophage dendritic cell progenitor | 2.29e-10 | 61 |
mesenchymal cell | 6.35e-10 | 354 |
fibroblast of tunica adventitia of artery | 1.13e-09 | 4 |
fibroblast of the aortic adventitia | 1.13e-09 | 4 |
connective tissue cell | 1.50e-09 | 361 |
monopoietic cell | 3.03e-09 | 59 |
monocyte | 3.03e-09 | 59 |
monoblast | 3.03e-09 | 59 |
promonocyte | 3.03e-09 | 59 |
fat cell | 3.27e-09 | 15 |
granulocyte monocyte progenitor cell | 3.67e-09 | 67 |
myeloid leukocyte | 2.54e-08 | 72 |
motile cell | 3.05e-08 | 386 |
myeloid lineage restricted progenitor cell | 5.70e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.36e-10 | 76 |
artery wall | 1.13e-09 | 4 |
tunica adventitia of artery | 1.13e-09 | 4 |
adventitia | 1.13e-09 | 4 |
tunica adventitia of blood vessel | 1.13e-09 | 4 |
aorta tunica adventitia | 1.13e-09 | 4 |
aorta wall | 1.13e-09 | 4 |
blood vessel layer | 1.61e-09 | 7 |
bone element | 3.45e-09 | 82 |
skeletal system | 4.44e-09 | 100 |
connective tissue | 4.82e-09 | 371 |
musculoskeletal system | 5.86e-09 | 167 |
cavity lining | 2.98e-08 | 12 |
serous membrane | 2.98e-08 | 12 |
skeletal element | 4.70e-08 | 90 |
immune system | 1.11e-07 | 93 |
mesoderm | 1.83e-07 | 315 |
mesoderm-derived structure | 1.83e-07 | 315 |
presumptive mesoderm | 1.83e-07 | 315 |
lateral plate mesoderm | 3.08e-07 | 203 |
hematopoietic system | 4.13e-07 | 98 |
blood island | 4.13e-07 | 98 |