FFCP PHASE1:Hg19::chr3:157160675..157160694,+: Difference between revisions
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|id=chr3:157160675..157160694,+
|short_description=p@chr3:157160675..157160694,+
|description=CAGE_peak_at_chr3:157160675..157160694,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:157160675..157160694,+ | |||
|coexpression_cluster_id=C549 | |||
|description=CAGE_peak_at_chr3:157160675..157160694,+ | |||
|id=chr3:157160675..157160694,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.78e-29!180;CL:0000057!2.48e-26!75;CL:0000048!1.25e-25!430;CL:0000723!1.48e-24!436;CL:0000034!8.24e-24!444;CL:0000144!7.41e-19!625;CL:0002371!1.80e-18!591;CL:0000012!4.20e-14!682;CL:0000548!7.23e-14!679;CL:0000004!7.23e-14!679;CL:0000255!7.23e-14!679;CL:0002320!1.10e-13!365;CL:0000134!9.90e-13!358;CL:0000222!1.20e-10!119;CL:0000219!1.79e-10!390;CL:0000680!3.99e-10!57;CL:0000056!3.99e-10!57;CL:0000355!3.99e-10!57;CL:0000003!6.25e-10!722;CL:0000187!6.39e-09!54;CL:0000393!1.20e-08!60;CL:0000211!1.20e-08!60;CL:0002334!2.45e-08!12;CL:0000183!3.96e-08!59;CL:0002494!2.13e-07!16;CL:0002620!5.78e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000569;5.58e-10;4!CL:0002494;1.17e-09;16!CL:0002548;1.36e-08;6!CL:0000135;9.07e-08;3!CL:0000388;9.07e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.39e-16,427;CL:0000723,1.99e-15,433;CL:0000034,8.66e-15,441;CL:0002320,1.77e-11,361;CL:0000057,3.23e-11,76;CL:0000134,8.41e-11,354;CL:0000569,5.90e-10,4;CL:0000011,5.90e-10,4;CL:0002494,1.18e-09,16;CL:0000219,4.83e-09,386;CL:0002548,1.32e-08,6;CL:0000136,1.96e-08,15;CL:0000135,5.85e-08,3;CL:0000388,5.85e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000011;5.58e-10;4 | |||
|ontology_enrichment_disease=DOID:2394!9.25e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.15e-13!375;UBERON:0002204!8.29e-10!167;UBERON:0000914!8.98e-10!83;UBERON:0002329!8.98e-10!83;UBERON:0003077!8.98e-10!83;UBERON:0003059!8.98e-10!83;UBERON:0007282!8.98e-10!83;UBERON:0009618!8.98e-10!83;UBERON:0007285!8.98e-10!83;UBERON:0004290!2.44e-09!70;UBERON:0001134!8.25e-09!61;UBERON:0002036!8.25e-09!61;UBERON:0003082!8.25e-09!61;UBERON:0004872!1.08e-08!84;UBERON:0000486!2.09e-08!82;UBERON:0000055!2.88e-08!69;UBERON:0002385!3.17e-08!63;UBERON:0001015!3.17e-08!63;UBERON:0000383!3.17e-08!63;UBERON:0004535!3.97e-08!110;UBERON:0001009!5.39e-08!113;UBERON:0000926!3.16e-07!448;UBERON:0004120!3.16e-07!448;UBERON:0006603!3.16e-07!448;UBERON:0002049!5.33e-07!79;UBERON:0007798!5.33e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.16e-09;9!UBERON:0000042;2.16e-09;9!UBERON:0007846;9.07e-08;3!UBERON:0000043;9.07e-08;3!UBERON:0007845;9.07e-08;3!UBERON:0001013;6.46e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.21e-11,371;UBERON:0000926,1.14e-08,315;UBERON:0004120,1.14e-08,315;UBERON:0006603,1.14e-08,315;UBERON:0007846,5.85e-08,3;UBERON:0000043,5.85e-08,3;UBERON:0007845,5.85e-08,3;UBERON:0001013,7.15e-07,14;UBERON:0004457,8.89e-07,12;UBERON:0000042,8.89e-07,12 | |||
|phase1_expression=1.63510541343501,5.78071414505655,2.11431606143957,3.00219895059391,0.446961094427288,8.72338524100369,0,3.15859936713415,0.261185628199839,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0.232429036905685,1.23350366406548,0.929119112685311,0.575384784644301,0.256160706529101,0.236482229888585,2.06847408441971,0.645484683583826,2.70852973188684,0,0,0,0.612167784741805,0.641858054152187,2.55734850319616,0,0,0,2.03146467040009,2.26954089876456,1.24564449799115,0.251248665256743,0.521482918420201,0,2.42159801053347,1.84138817993782,0.949387162322653,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,1.80719576192283,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,2.93649605346934,1.6507082516404,0.417989933073621,0.258416759169329,0.35576626268671,0,0.805658634218294,0,0.24406205754817,0.367663080345869,1.62028389576352,0.0892997282840798,0.44905874525234,0,0,0,0.366403487860815,0,0,0,2.48485975847659,4.17880688493113,0.794455084879313,24.3811127636492,2.83734705758686,1.12135520028461,2.1349799145941,1.2333377420858,0,1.75123873690594,1.9615428373615,0.302714855289863,0,1.64025002283658,0.312160076830321,0,0.149448680551801,0.939475989150119,0.161872944368132,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,0,0.494533858557114,0.910161361938026,1.43723628363248,0.168336113954066,0,0,0.438977620880838,1.22595118319608,0.45071417671979,0.794025282120147,0.89694817844431,0.640672166455702,2.33125091275518,0,0.412210116953756,3.34932702059318,0.37223371266318,0,0.68205903612839,1.00973509697646,0.184099797284599,0.161646056818812,2.4850671476163,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,9.28735856063958,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0,0.288732895522148,2.77791307545966,3.42457474022277,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,1.690605505112,0,0,0,0,0,0,0,1.64648067356154,0,0,2.37585561880029,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0.24538298343828,1.00034104211935,1.89885516589815,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,4.5481500811197,4.1389228517002,0,0.368738337083406,2.25897397617015,0,0,0,0.215714200818617,0,0,0,0,0.992431231275107,0.306923946576125,1.96462066103151,2.43464383585832,0.511707249066704,3.37793234401576,0,0.462629081407967,1.77561725313127,0.328508624055237,1.03850885836724,1.16210378459959,0,0,0,0.114814448164607,1.27463817604702,0.655622074797121,0,0,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,3.21367859688319,0.676695028044854,1.3864375540318,1.84204409671355,1.37836572484531,1.18162269355101,1.45016693914229,0.852266274161009,0.0890320356467374,0,0,0,0,0,9.4443704049192,0,0.924100740528266,0,0,0,0.143124886741991,0,0,0.38126038784765,0,2.1396949401696,1.59101623962968,0.78494864019923,0.359744915166629,0.54907405947211,1.41374882814824,0.202182481573316,0,0,0,4.6305563029944,0,0.545999645631943,1.27264888758341,0,0,1.32687795048244,0.438450885253763,1.15755106853338,0.655894752046633,0,0.6196469961995,0.563391205064483,0.143411352204052,0.589494246078727,0,0,9.07762831779956,24.6971169719926,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62899880526114,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0.298509605773748,1.40227985908335,6.10286447652875,1.32582103692562,4.0250864280412,0.889811221596536,11.6708434882431,11.0398574347165,1.24349760466224,2.80924784980304,1.43367090447332,2.24901556081802,0.465788870628778,1.24411862352257,4.78515086204391,0,0,0.380805212168795,0.406870733204662,0.909243296012797,0.751873899297419,4.64033759878494,0.398095888698616,0.400027764663154,1.37358282073117,1.01024846629776,0,0,0,0.521988583930423,0,0,0.244736704506468,0,0,0.877136198314828,0,0.38582807654183,0.337884881306145,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,1.90802610392051,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr3:157160675..157160694,+ | |||
}} | }} |
Latest revision as of 17:34, 29 July 2015
Short description: | p@chr3:157160675..157160694, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:157160675..157160694, + |
Coexpression cluster: | C549_mesenchymal_Fibroblast_Synoviocyte_Hair_Smooth_Preadipocyte_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.39e-16 | 427 |
somatic stem cell | 1.99e-15 | 433 |
stem cell | 8.66e-15 | 441 |
connective tissue cell | 1.77e-11 | 361 |
fibroblast | 3.23e-11 | 76 |
mesenchymal cell | 8.41e-11 | 354 |
cardiac mesenchymal cell | 5.90e-10 | 4 |
migratory trunk neural crest cell | 5.90e-10 | 4 |
cardiocyte | 1.18e-09 | 16 |
motile cell | 4.83e-09 | 386 |
cardiac fibroblast | 1.32e-08 | 6 |
fat cell | 1.96e-08 | 15 |
fibrocyte | 5.85e-08 | 3 |
tendon cell | 5.85e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.21e-11 | 371 |
mesoderm | 1.14e-08 | 315 |
mesoderm-derived structure | 1.14e-08 | 315 |
presumptive mesoderm | 1.14e-08 | 315 |
dense regular connective tissue | 5.85e-08 | 3 |
tendon | 5.85e-08 | 3 |
regular connective tissue | 5.85e-08 | 3 |
adipose tissue | 7.15e-07 | 14 |
cavity lining | 8.89e-07 | 12 |
serous membrane | 8.89e-07 | 12 |