FFCP PHASE1:Hg19::chr3:46607718..46607721,-: Difference between revisions
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|id=chr3:46607718..46607721,-
|short_description=p9@LRRC2
|description=CAGE_peak_9_at_LRRC2_5end
|association_with_transcript=2bp_to_ENST00000469912_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79442 | |EntrezGene=79442 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14676 | |HGNC=14676 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000469912_5end | |||
|cluster_id=chr3:46607718..46607721,- | |||
|description=CAGE_peak_9_at_LRRC2_5end | |||
|id=chr3:46607718..46607721,- | |||
|ontology_enrichment_celltype=CL:0002322!4.00e-14!5;CL:0000764!2.83e-07!2;CL:0000765!2.83e-07!2;CL:0000050!2.83e-07!2;CL:0000038!2.83e-07!2;CL:0000558!2.83e-07!2;CL:0000547!2.83e-07!2;CL:0000549!2.83e-07!2;CL:0000550!2.83e-07!2;CL:0000552!2.83e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.69e-21;2!CL:0000558;5.69e-21;2!CL:0002537;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.70e-21,2;CL:0000765,5.70e-21,2;CL:0000050,5.70e-21,2;CL:0000038,5.70e-21,2;CL:0000558,5.70e-21,2;CL:0000547,5.70e-21,2;CL:0000549,5.70e-21,2;CL:0000550,5.70e-21,2;CL:0000552,5.70e-21,2;CL:0002537,3.49e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.10e-41;1!UBERON:0008814;5.69e-21;2!UBERON:0010056;5.69e-21;2 | |||
|ontology_enrichment_disease=DOID:3350!3.19e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.74e-15!115;UBERON:0000200!2.33e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.83e-14;3!UBERON:0001033;1.83e-14;3!UBERON:0000478;1.25e-07;24!UBERON:0000305;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.60e-14,3;UBERON:0001033,1.60e-14,3;UBERON:0010056,1.60e-14,3;UBERON:0000478,1.31e-07,24;UBERON:0000305,6.39e-07,7 | |||
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| ||
|short_description=p9@LRRC2 | |||
}} | }} |
Latest revision as of 11:28, 18 September 2015
Short description: | p9@LRRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LRRC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000469912_5end |
EntrezGene: | LRRC2 |
HGNC: | 14676 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.70e-21 | 2 |
erythroblast | 5.70e-21 | 2 |
megakaryocyte-erythroid progenitor cell | 5.70e-21 | 2 |
erythroid progenitor cell | 5.70e-21 | 2 |
reticulocyte | 5.70e-21 | 2 |
proerythroblast | 5.70e-21 | 2 |
basophilic erythroblast | 5.70e-21 | 2 |
polychromatophilic erythroblast | 5.70e-21 | 2 |
orthochromatic erythroblast | 5.70e-21 | 2 |
amnion mesenchymal stem cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.60e-14 | 3 |
gustatory system | 1.60e-14 | 3 |
future tongue | 1.60e-14 | 3 |
extraembryonic structure | 1.31e-07 | 24 |
amnion | 6.39e-07 | 7 |