FFCP PHASE1:Hg19::chr3:63428918..63428932,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:63428918..63428932,+
|short_description=p4@SYNPR
|description=CAGE_peak_4_at_SYNPR_5end
|association_with_transcript=-53bp_to_ENST00000472899_5end
|Entrez...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=132204 | |EntrezGene=132204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16507 | |HGNC=16507 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDB8 | |UniProt=F8WDB8 | ||
|association_with_transcript=-53bp_to_ENST00000472899_5end | |||
|cluster_id=chr3:63428918..63428932,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_SYNPR_5end | |||
|id=chr3:63428918..63428932,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.51e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.04e-14;82!UBERON:0010122;8.35e-13;2!UBERON:0006222;3.57e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.84e-93!57;UBERON:0005068!1.84e-93!57;UBERON:0006241!1.84e-93!57;UBERON:0007135!1.84e-93!57;UBERON:0001017!4.65e-91!82;UBERON:0005743!1.91e-86!86;UBERON:0002780!9.28e-85!41;UBERON:0001890!9.28e-85!41;UBERON:0006240!9.28e-85!41;UBERON:0001893!1.00e-83!34;UBERON:0002020!4.41e-83!34;UBERON:0003528!4.41e-83!34;UBERON:0003080!1.35e-82!42;UBERON:0000073!4.27e-81!94;UBERON:0001016!4.27e-81!94;UBERON:0002791!3.05e-80!33;UBERON:0001869!2.35e-77!32;UBERON:0002616!1.25e-76!59;UBERON:0000955!4.25e-71!69;UBERON:0006238!4.25e-71!69;UBERON:0003075!1.37e-65!86;UBERON:0007284!1.37e-65!86;UBERON:0002346!1.59e-65!90;UBERON:0002619!1.06e-60!22;UBERON:0001950!1.88e-60!20;UBERON:0003056!9.57e-55!61;UBERON:0000956!4.38e-53!25;UBERON:0000203!4.38e-53!25;UBERON:0007023!7.18e-45!115;UBERON:0000924!6.84e-42!173;UBERON:0006601!6.84e-42!173;UBERON:0004121!4.19e-41!169;UBERON:0000033!1.47e-38!123;UBERON:0000153!2.38e-36!129;UBERON:0007811!2.38e-36!129;UBERON:0002308!6.04e-32!9;UBERON:0000125!6.04e-32!9;UBERON:0009663!5.49e-26!7;UBERON:0002420!7.11e-26!9;UBERON:0007245!7.11e-26!9;UBERON:0010009!7.11e-26!9;UBERON:0010011!7.11e-26!9;UBERON:0000454!7.11e-26!9;UBERON:0000025!9.23e-24!194;UBERON:0000200!9.99e-23!6;UBERON:0001872!6.40e-19!5;UBERON:0002021!7.41e-19!5;UBERON:0004111!3.08e-17!241;UBERON:0001871!1.46e-16!7;UBERON:0000369!1.82e-16!4;UBERON:0002435!1.82e-16!4;UBERON:0000204!1.82e-16!4;UBERON:0010082!1.82e-16!4;UBERON:0002298!8.31e-15!8;UBERON:0000477!5.50e-14!286;UBERON:0003076!2.16e-13!15;UBERON:0003057!2.16e-13!15;UBERON:0000483!5.04e-13!309;UBERON:0000119!8.39e-13!312;UBERON:0005383!8.81e-13!3;UBERON:0005382!8.81e-13!3;UBERON:0002771!1.11e-12!3;UBERON:0002240!5.68e-11!3;UBERON:0000988!8.65e-11!3;UBERON:0006331!1.14e-10!3;UBERON:0000064!2.53e-10!219;UBERON:0000475!2.63e-10!365;UBERON:0001873!5.16e-09!2;UBERON:0010122!5.16e-09!2;UBERON:0001897!7.87e-09!2;UBERON:0001870!2.34e-08!2;UBERON:0001875!2.51e-08!2;UBERON:0006514!2.51e-08!2;UBERON:0002360!7.71e-08!2;UBERON:0000094!7.71e-08!2;UBERON:0007645!7.71e-08!2;UBERON:0002148!1.10e-07!2;UBERON:0009662!1.10e-07!2;UBERON:0000349!2.69e-07!5;UBERON:0004733!6.33e-07!12;UBERON:0002028!6.33e-07!12;UBERON:0007277!6.33e-07!12;UBERON:0000922!6.72e-07!612;UBERON:0005174!9.32e-07!5;UBERON:0001137!9.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.87e-81;34!UBERON:0001869;9.34e-81;32!UBERON:0002791;2.96e-76;32!UBERON:0002780;3.70e-70;41!UBERON:0001890;3.70e-70;41!UBERON:0003528;3.30e-68;34!UBERON:0002020;3.30e-68;34!UBERON:0002619;7.07e-67;22!UBERON:0001950;2.83e-65;20!UBERON:0000956;9.66e-59;25!UBERON:0000203;9.66e-59;25!UBERON:0000073;1.97e-45;53!UBERON:0002616;1.97e-45;53!UBERON:0002420;3.36e-30;9!UBERON:0007245;3.36e-30;9!UBERON:0010009;3.36e-30;9!UBERON:0010011;3.36e-30;9!UBERON:0000454;3.36e-30;9!UBERON:0001017;1.55e-29;75!UBERON:0009663;3.45e-29;7!UBERON:0000955;7.67e-28;68!UBERON:0002021;1.40e-27;5!UBERON:0001016;2.87e-25;83!UBERON:0000369;4.63e-24;4!UBERON:0002435;4.63e-24;4!UBERON:0000204;4.63e-24;4!UBERON:0000200;7.71e-24;6!UBERON:0000125;1.37e-22;9!UBERON:0002308;1.37e-22;9!UBERON:0005383;1.73e-18;3!UBERON:0005382;1.73e-18;3!UBERON:0001872;2.14e-18;5!UBERON:0001871;3.93e-13;6!UBERON:0001873;8.35e-13;2!UBERON:0002771;9.38e-13;2!UBERON:0007023;1.11e-12;114!UBERON:0001897;1.45e-12;2!UBERON:0010225;1.45e-12;2!UBERON:0011216;2.86e-12;132!UBERON:0001875;7.25e-12;2!UBERON:0006514;7.25e-12;2!UBERON:0000349;1.56e-10;5!UBERON:0001870;1.04e-08;3!UBERON:0010314;2.00e-08;132!UBERON:0001894;5.37e-08;7!UBERON:0001874;2.09e-07;1!UBERON:0002022;2.50e-07;1!UBERON:0001882;2.66e-07;1!UBERON:0005403;2.66e-07;1!UBERON:0003112;4.92e-07;1!UBERON:0011158;4.92e-07;1!UBERON:0003128;4.92e-07;1!UBERON:0001703;4.92e-07;1!UBERON:0002241;4.92e-07;1!UBERON:0002581;6.95e-07;1!UBERON:0002902;6.95e-07;1!UBERON:0009899;6.95e-07;1!UBERON:0007190;6.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,7.77e-100,41;UBERON:0001890,7.77e-100,41;UBERON:0003080,7.77e-100,41;UBERON:0006240,7.77e-100,41;UBERON:0001893,2.13e-95,34;UBERON:0001869,1.57e-93,32;UBERON:0002791,1.07e-85,32;UBERON:0001049,5.21e-83,56;UBERON:0005068,5.21e-83,56;UBERON:0006241,5.21e-83,56;UBERON:0007135,5.21e-83,56;UBERON:0000073,4.18e-82,53;UBERON:0002616,4.18e-82,53;UBERON:0003528,1.59e-80,34;UBERON:0002020,1.59e-80,34;UBERON:0001017,1.26e-67,81;UBERON:0002619,5.52e-67,22;UBERON:0000955,8.32e-67,68;UBERON:0006238,8.32e-67,68;UBERON:0003056,7.57e-66,61;UBERON:0001950,1.81e-65,20;UBERON:0001016,2.10e-64,89;UBERON:0000956,7.77e-59,25;UBERON:0000203,7.77e-59,25;UBERON:0003075,3.32e-55,82;UBERON:0007284,3.32e-55,82;UBERON:0002346,2.12e-52,86;UBERON:0010371,2.03e-42,104;UBERON:0007023,7.78e-36,114;UBERON:0010314,8.97e-35,132;UBERON:0004121,3.50e-31,171;UBERON:0000924,3.50e-31,171;UBERON:0006601,3.50e-31,171;UBERON:0002420,3.59e-30,9;UBERON:0007245,3.59e-30,9;UBERON:0010009,3.59e-30,9;UBERON:0010011,3.59e-30,9;UBERON:0000454,3.59e-30,9;UBERON:0009663,4.19e-29,7;UBERON:0002021,1.12e-27,5;UBERON:0011216,7.25e-26,223;UBERON:0000369,4.63e-24,4;UBERON:0002435,4.63e-24,4;UBERON:0000204,4.63e-24,4;UBERON:0010082,4.63e-24,4;UBERON:0000200,5.54e-24,6;UBERON:0000125,1.59e-22,9;UBERON:0002308,1.59e-22,9;UBERON:0000025,2.23e-20,192;UBERON:0001872,1.63e-18,5;UBERON:0005383,1.73e-18,3;UBERON:0005382,1.73e-18,3;UBERON:0004111,4.02e-15,240;UBERON:0001871,3.81e-13,6;UBERON:0001873,8.36e-13,2;UBERON:0010122,8.36e-13,2;UBERON:0002771,8.86e-13,2;UBERON:0001897,1.58e-12,2;UBERON:0010225,1.58e-12,2;UBERON:0001875,9.06e-12,2;UBERON:0006514,9.06e-12,2;UBERON:0000483,1.43e-10,306;UBERON:0000349,1.66e-10,5;UBERON:0000119,2.08e-10,309;UBERON:0001870,1.06e-08,3;UBERON:0001894,5.56e-08,7;UBERON:0006222,5.56e-08,7;UBERON:0001874,2.09e-07,1;UBERON:0002022,2.50e-07,1;UBERON:0001882,2.66e-07,1;UBERON:0005403,2.66e-07,1;UBERON:0003112,4.78e-07,1;UBERON:0011158,4.78e-07,1;UBERON:0003128,4.78e-07,1;UBERON:0001703,4.78e-07,1;UBERON:0002241,4.78e-07,1;UBERON:0004761,4.78e-07,1;UBERON:0009617,4.78e-07,1;UBERON:0002581,5.69e-07,1;UBERON:0007190,6.02e-07,1;UBERON:0002902,8.49e-07,1;UBERON:0009899,8.49e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68803299692615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,6.02992638052033,0,0,0,0,0,0,0,0,0,0,4.42870692906919,17.6070800393096,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55022605855557,0,5.85661114313348,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,3.79864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,12.5751582282111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,7.80968095372564,8.51298328804199,0,0.221858103073705,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94511275452442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04445724412665,0,0,0,0,0,0,0,0,0,0,11.882406642845,2.8339315265117,4.78901577171454,2.46139637088906,1.76450187355203,2.14387482639075,3.87541549516443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90411613859097,0.781078098613847,5.58054350553197,2.98054307911362,4.37579847214576,0,0,0.879356221798103,0,0,0,0,0,0,0,0,0.679697329768317,2.95977481032821,0,0,0,31.5802335731164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0.286679166302903,0,2.17572768610927,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2667110313405,2.37895890482359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68803299692615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,6.02992638052033,0,0,0,0,0,0,0,0,0,0,4.42870692906919,17.6070800393096,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55022605855557,0,5.85661114313348,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,3.79864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,12.5751582282111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,7.80968095372564,8.51298328804199,0,0.221858103073705,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94511275452442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04445724412665,0,0,0,0,0,0,0,0,0,0,11.882406642845,2.8339315265117,4.78901577171454,2.46139637088906,1.76450187355203,2.14387482639075,3.87541549516443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90411613859097,0.781078098613847,5.58054350553197,2.98054307911362,4.37579847214576,0,0,0.879356221798103,0,0,0,0,0,0,0,0,0.679697329768317,2.95977481032821,0,0,0,31.5802335731164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0.286679166302903,0,2.17572768610927,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2667110313405,2.37895890482359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@SYNPR | |||
}} | }} |
Latest revision as of 08:34, 19 September 2015
Short description: | p4@SYNPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYNPR_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -53bp_to_ENST00000472899_5end |
EntrezGene: | SYNPR |
HGNC: | 16507 |
UniProt: | F8WDB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data