FFCP PHASE1:Hg19::chr4:103790208..103790227,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:103790208..103790227,+
|short_description=p2@CISD2
|description=CAGE_peak_2_at_CISD2_5end
|association_with_transcript=73bp_to_ENST00000273986,NM_001008388...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=493856 | |EntrezGene=493856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24212 | |HGNC=24212 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5K1 | |UniProt=Q8N5K1 | ||
|association_with_transcript=73bp_to_ENST00000273986,NM_001008388,uc003hwt.3_5end | |||
|cluster_id=chr4:103790208..103790227,+ | |||
|description=CAGE_peak_2_at_CISD2_5end | |||
|id=chr4:103790208..103790227,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,5.82e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.11e-15!86;UBERON:0000073!9.39e-15!94;UBERON:0001016!9.39e-15!94;UBERON:0001017!1.39e-13!82;UBERON:0000955!6.00e-11!69;UBERON:0006238!6.00e-11!69;UBERON:0003075!1.23e-10!86;UBERON:0007284!1.23e-10!86;UBERON:0002616!4.11e-09!59;UBERON:0000475!5.06e-09!365;UBERON:0002346!5.69e-09!90;UBERON:0000481!7.97e-09!347;UBERON:0001049!1.25e-08!57;UBERON:0005068!1.25e-08!57;UBERON:0006241!1.25e-08!57;UBERON:0007135!1.25e-08!57;UBERON:0000119!5.57e-08!312;UBERON:0003056!5.57e-08!61;UBERON:0000033!6.92e-08!123;UBERON:0000483!1.14e-07!309;UBERON:0000153!7.10e-07!129;UBERON:0007811!7.10e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.66e-14,81;UBERON:0001016,3.79e-14,89;UBERON:0000955,1.29e-11,68;UBERON:0006238,1.29e-11,68;UBERON:0003075,1.18e-10,82;UBERON:0007284,1.18e-10,82;UBERON:0010314,1.92e-10,132;UBERON:0011216,2.17e-09,223;UBERON:0001049,3.62e-09,56;UBERON:0005068,3.62e-09,56;UBERON:0006241,3.62e-09,56;UBERON:0007135,3.62e-09,56;UBERON:0003056,5.45e-09,61;UBERON:0002346,5.97e-09,86;UBERON:0000073,2.20e-08,53;UBERON:0002616,2.20e-08,53;UBERON:0000119,1.03e-07,309;UBERON:0000483,2.10e-07,306;UBERON:0010371,7.54e-07,104 | |||
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| ||
|short_description=p2@CISD2 | |||
}} | }} |
Latest revision as of 05:21, 20 September 2015
Short description: | p2@CISD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CISD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_ENST00000273986, NM_001008388, uc003hwt.3_5end |
EntrezGene: | CISD2 |
HGNC: | 24212 |
UniProt: | Q8N5K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 5.82e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.66e-14 | 81 |
nervous system | 3.79e-14 | 89 |
brain | 1.29e-11 | 68 |
future brain | 1.29e-11 | 68 |
neural plate | 1.18e-10 | 82 |
presumptive neural plate | 1.18e-10 | 82 |
structure with developmental contribution from neural crest | 1.92e-10 | 132 |
organ system subdivision | 2.17e-09 | 223 |
neural tube | 3.62e-09 | 56 |
neural rod | 3.62e-09 | 56 |
future spinal cord | 3.62e-09 | 56 |
neural keel | 3.62e-09 | 56 |
pre-chordal neural plate | 5.45e-09 | 61 |
neurectoderm | 5.97e-09 | 86 |
regional part of nervous system | 2.20e-08 | 53 |
regional part of brain | 2.20e-08 | 53 |
cell layer | 1.03e-07 | 309 |
epithelium | 2.10e-07 | 306 |
ecto-epithelium | 7.54e-07 | 104 |