FFCP PHASE1:Hg19::chr4:110481496..110481512,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:110481496..110481512,+
|short_description=p3@CCDC109B
|description=CAGE_peak_3_at_CCDC109B_5end
|association_with_transcript=128bp_to_ENST00000515114_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55013 | |EntrezGene=55013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26076 | |HGNC=26076 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=128bp_to_ENST00000515114_5end | |||
|cluster_id=chr4:110481496..110481512,+ | |||
|description=CAGE_peak_3_at_CCDC109B_5end | |||
|id=chr4:110481496..110481512,+ | |||
|ontology_enrichment_celltype=CL:0002087!6.43e-20!119;CL:0002057!1.94e-18!42;CL:0000860!2.86e-18!45;CL:0000738!5.60e-17!140;CL:0002031!2.49e-15!124;CL:0000084!1.61e-13!25;CL:0000827!1.61e-13!25;CL:0000791!2.83e-12!18;CL:0000789!2.83e-12!18;CL:0002420!2.83e-12!18;CL:0002419!2.83e-12!18;CL:0000790!2.83e-12!18;CL:0000003!1.56e-11!722;CL:0000838!4.53e-11!52;CL:0000542!6.49e-11!53;CL:0000051!6.49e-11!53;CL:0000034!1.91e-10!444;CL:0000037!4.15e-10!172;CL:0000566!4.15e-10!172;CL:0000723!4.39e-10!436;CL:0000988!5.61e-10!182;CL:0000048!1.27e-09!430;CL:0002194!2.04e-08!63;CL:0000576!2.04e-08!63;CL:0000040!2.04e-08!63;CL:0000559!2.04e-08!63;CL:0002009!3.86e-08!65;CL:0002032!4.50e-08!165;CL:0000837!4.50e-08!165;CL:0000144!4.97e-08!625;CL:0000625!6.74e-08!11;CL:0000134!4.51e-07!358;CL:0000557!8.58e-07!71;CL:0000012!9.42e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.54e-16;33!CL:0002057;3.54e-16;33!CL:0000084;1.78e-15;25!CL:0000791;1.17e-13;18!CL:0000789;1.17e-13;18!CL:0002419;1.17e-13;18!CL:0000473;2.19e-10;39!CL:0000234;2.19e-10;39!CL:0000576;5.57e-10;48!CL:0000625;9.71e-09;11!CL:0002087;2.53e-08;104!CL:0000542;3.27e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.03e-23,115;CL:0000738,3.72e-21,136;CL:0000860,2.72e-20,42;CL:0002057,2.72e-20,42;CL:0002031,7.49e-19,120;CL:0000473,5.37e-16,48;CL:0000234,5.37e-16,48;CL:0000084,3.03e-15,25;CL:0000827,3.03e-15,25;CL:0000037,1.74e-13,168;CL:0000791,1.90e-13,18;CL:0000789,1.90e-13,18;CL:0002420,1.90e-13,18;CL:0002419,1.90e-13,18;CL:0000790,1.90e-13,18;CL:0000988,8.64e-13,177;CL:0000838,5.24e-12,52;CL:0000542,7.76e-12,53;CL:0000051,7.76e-12,53;CL:0002032,5.77e-11,161;CL:0000837,5.77e-11,161;CL:0002194,9.72e-11,59;CL:0000576,9.72e-11,59;CL:0000040,9.72e-11,59;CL:0000559,9.72e-11,59;CL:0002009,1.41e-10,61;CL:0000034,1.68e-10,441;CL:0000723,2.62e-10,433;CL:0000048,7.55e-10,427;CL:0000766,7.74e-09,72;CL:0000557,1.05e-08,67;CL:0000625,1.36e-08,11;CL:0000839,4.77e-08,66;CL:0000134,5.19e-08,354;CL:0002320,1.50e-07,361;CL:0000219,5.67e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.21e-14;42!CL:0000790;1.17e-13;18!CL:0000051;3.27e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.75e-13!112;UBERON:0002390!2.87e-11!102;UBERON:0003061!2.87e-11!102;UBERON:0003081!5.27e-10!216;UBERON:0001474!1.75e-07!86;UBERON:0004765!3.00e-07!101;UBERON:0001434!3.00e-07!101;UBERON:0004535!4.25e-07!110;UBERON:0002371!5.14e-07!80;UBERON:0002204!8.86e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.64e-15,108;UBERON:0002390,4.83e-13,98;UBERON:0003061,4.83e-13,98;UBERON:0002405,2.58e-11,93;UBERON:0003081,9.98e-10,203;UBERON:0001474,2.20e-09,82;UBERON:0002371,1.09e-08,76;UBERON:0004765,1.76e-08,90;UBERON:0001434,6.88e-08,100;UBERON:0002384,5.29e-07,371 | |||
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| ||
|short_description=p3@CCDC109B | |||
}} | }} |
Latest revision as of 16:14, 24 September 2015
Short description: | p3@CCDC109B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC109B_5end |
Coexpression cluster: | NA |
Association with transcript: | 128bp_to_ENST00000515114_5end |
EntrezGene: | CCDC109B |
HGNC: | 26076 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.64e-15 | 108 |
hematopoietic system | 4.83e-13 | 98 |
blood island | 4.83e-13 | 98 |
immune system | 2.58e-11 | 93 |
lateral plate mesoderm | 9.98e-10 | 203 |
bone element | 2.20e-09 | 82 |
bone marrow | 1.09e-08 | 76 |
skeletal element | 1.76e-08 | 90 |
skeletal system | 6.88e-08 | 100 |
connective tissue | 5.29e-07 | 371 |