FFCP PHASE1:Hg19::chr4:13549321..13549348,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:13549321..13549348,-
|short_description=p1@LOC285548
|description=CAGE_peak_1_at_LOC285548_5end
|association_with_transcript=76bp_to_ENST00000501050,uc010i...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285548 | |EntrezGene=285548 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=76bp_to_ENST00000501050,uc010idq.1_5end | |||
|cluster_id=chr4:13549321..13549348,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_1_at_LOC285548_5end | |||
|id=chr4:13549321..13549348,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002564;2.08e-11;3!CL:0002553;1.16e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.59e-11,3;CL:0002553,1.21e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!2.95e-08!22;DOID:2994!2.95e-08!22;DOID:171!1.50e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!2.15e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;7.15e-15;5!UBERON:0002216;7.15e-15;5!UBERON:0011134;7.15e-15;5!UBERON:0002209;7.15e-15;5!UBERON:0002213;7.15e-15;5!UBERON:0007844;7.15e-15;5!UBERON:0011138;7.15e-15;5!UBERON:0001130;7.15e-15;5!UBERON:0001066;7.15e-15;5!UBERON:0001468;7.15e-15;5!UBERON:0002242;2.08e-11;3!UBERON:0004905;1.69e-09;8!UBERON:0000982;1.69e-09;8!UBERON:0004770;1.69e-09;8!UBERON:0002331;4.00e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,5.63e-15,5;UBERON:0002216,5.63e-15,5;UBERON:0011134,5.63e-15,5;UBERON:0002209,5.63e-15,5;UBERON:0002213,5.63e-15,5;UBERON:0005856,5.63e-15,5;UBERON:0005866,5.63e-15,5;UBERON:0005863,5.63e-15,5;UBERON:0007844,5.63e-15,5;UBERON:0011138,5.63e-15,5;UBERON:0001130,5.63e-15,5;UBERON:0001066,5.63e-15,5;UBERON:0001468,5.63e-15,5;UBERON:0002242,1.59e-11,3;UBERON:0003068,1.59e-11,3;UBERON:0002328,1.59e-11,3;UBERON:0004880,1.59e-11,3;UBERON:0004905,1.46e-09,8;UBERON:0000982,1.46e-09,8;UBERON:0004770,1.46e-09,8;UBERON:0002331,4.00e-08,10;UBERON:0000358,4.00e-08,10;UBERON:0000307,4.00e-08,10;UBERON:0000091,4.00e-08,10;UBERON:0000087,4.00e-08,10;UBERON:0007010,4.00e-08,10;UBERON:0007806,4.00e-08,10;UBERON:0008780,4.00e-08,10;UBERON:0005728,4.00e-08,10 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,2.22779435328084,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96306386750624,0,1.08506009479894,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.482561763430822,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00726411300178,0.577566499444116,0,0.650060246036521,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0,0.614481528616916,1.11838053946208,1.00109485027145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00177834520615,0,0,0,0.828851746593443,0.251932747854276,0,0.738508832766417,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,9.78519724646052,4.69542967996711,4.38572187922913,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.397429223405979,0,2.15106521008283,0,0,0.39961921916426,0,0.229073192331831,3.08870996151536,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0.0824158583811665,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,2.00640639386872,0,0,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.434763085832475,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782982875895635,0,0.463044948647668,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.640150378164845,0,0,0,0.139879507719444,0,0,0.107824811396682,0.943595651135378,0,0,1.06287460050841,0.495743057036009,0.558644917973244,0,1.26178792002005,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0.127762427639595,0,0,0,0,0,0.576169937778896,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0.591660003652827,1.10777426186905,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,1.50962843566674,0.308696632431779,0.437119121007915,0,0,0.471353094203252,0.196308467114945,0,0,0,0.0939839179798536,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.327796715891087,0.380095503034311,0.203977659483963,0,0.735159196278759,0.250707539292375,2.8795905322931,3.48353369203032,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0,0.426909383510862,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,2.22779435328084,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96306386750624,0,1.08506009479894,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.482561763430822,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00726411300178,0.577566499444116,0,0.650060246036521,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0,0.614481528616916,1.11838053946208,1.00109485027145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00177834520615,0,0,0,0.828851746593443,0.251932747854276,0,0.738508832766417,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,9.78519724646052,4.69542967996711,4.38572187922913,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.397429223405979,0,2.15106521008283,0,0,0.39961921916426,0,0.229073192331831,3.08870996151536,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0.0824158583811665,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,2.00640639386872,0,0,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.434763085832475,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782982875895635,0,0.463044948647668,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.640150378164845,0,0,0,0.139879507719444,0,0,0.107824811396682,0.943595651135378,0,0,1.06287460050841,0.495743057036009,0.558644917973244,0,1.26178792002005,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0.127762427639595,0,0,0,0,0,0.576169937778896,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0.591660003652827,1.10777426186905,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,1.50962843566674,0.308696632431779,0.437119121007915,0,0,0.471353094203252,0.196308467114945,0,0,0,0.0939839179798536,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.327796715891087,0.380095503034311,0.203977659483963,0,0.735159196278759,0.250707539292375,2.8795905322931,3.48353369203032,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0,0.426909383510862,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | ||
|short_description=p1@LOC285548 | |||
}} | }} |
Latest revision as of 04:49, 25 September 2015
Short description: | p1@LOC285548 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC285548_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 76bp_to_ENST00000501050, uc010idq.1_5end |
EntrezGene: | LOC285548 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.59e-11 | 3 |
lung fibroblast | 1.21e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 5.63e-15 | 5 |
symphysis | 5.63e-15 | 5 |
nonsynovial joint | 5.63e-15 | 5 |
fibrous joint | 5.63e-15 | 5 |
cartilaginous joint | 5.63e-15 | 5 |
developing mesenchymal condensation | 5.63e-15 | 5 |
pre-cartilage condensation | 5.63e-15 | 5 |
cartilaginous condensation | 5.63e-15 | 5 |
cartilage element | 5.63e-15 | 5 |
post-cranial axial skeletal system | 5.63e-15 | 5 |
vertebral column | 5.63e-15 | 5 |
intervertebral disk | 5.63e-15 | 5 |
intervertebral joint | 5.63e-15 | 5 |
nucleus pulposus | 1.59e-11 | 3 |
axial mesoderm | 1.59e-11 | 3 |
notochord | 1.59e-11 | 3 |
chordamesoderm | 1.59e-11 | 3 |
articulation | 1.46e-09 | 8 |
skeletal joint | 1.46e-09 | 8 |
articular system | 1.46e-09 | 8 |
umbilical cord | 4.00e-08 | 10 |
blastocyst | 4.00e-08 | 10 |
blastula | 4.00e-08 | 10 |
bilaminar disc | 4.00e-08 | 10 |
inner cell mass | 4.00e-08 | 10 |
cleaving embryo | 4.00e-08 | 10 |
connecting stalk | 4.00e-08 | 10 |
inner cell mass derived epiblast | 4.00e-08 | 10 |
extraembryonic mesoderm | 4.00e-08 | 10 |