FFCP PHASE1:Hg19::chr4:159593418..159593517,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:159593418..159593517,+
|short_description=p1@ETFDH
|description=CAGE_peak_1_at_ETFDH_5end
|association_with_transcript=0bp_to_ENST00000307738,ENST000004360...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2110 | |EntrezGene=2110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3483 | |HGNC=3483 | ||
|TSSclassifier=strong | |||
|UniProt=Q16134,D6RAD5 | |UniProt=Q16134,D6RAD5 | ||
|association_with_transcript=0bp_to_ENST00000307738,ENST00000436096,ENST00000507475,ENST00000510353_5end | |||
|cluster_id=chr4:159593418..159593517,+ | |||
|coexpression_cluster_id=C1874 | |||
|description=CAGE_peak_1_at_ETFDH_5end | |||
|id=chr4:159593418..159593517,+ | |||
|ontology_enrichment_celltype=CL:0000136!4.19e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.52e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.19e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.54e-32!115;UBERON:0001049!2.15e-15!57;UBERON:0005068!2.15e-15!57;UBERON:0006241!2.15e-15!57;UBERON:0007135!2.15e-15!57;UBERON:0002616!2.38e-14!59;UBERON:0003080!1.14e-13!42;UBERON:0002780!3.99e-13!41;UBERON:0001890!3.99e-13!41;UBERON:0006240!3.99e-13!41;UBERON:0000955!3.45e-11!69;UBERON:0006238!3.45e-11!69;UBERON:0001893!2.83e-10!34;UBERON:0002020!2.91e-10!34;UBERON:0003528!2.91e-10!34;UBERON:0003075!6.71e-10!86;UBERON:0007284!6.71e-10!86;UBERON:0002791!7.00e-10!33;UBERON:0002346!1.61e-09!90;UBERON:0001869!1.73e-09!32;UBERON:0001017!1.79e-09!82;UBERON:0005743!1.92e-09!86;UBERON:0000073!5.60e-09!94;UBERON:0001016!5.60e-09!94;UBERON:0002619!2.85e-08!22;UBERON:0000153!3.56e-08!129;UBERON:0007811!3.56e-08!129;UBERON:0000033!1.21e-07!123;UBERON:0003056!1.83e-07!61;UBERON:0001950!2.39e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.71e-10;41!UBERON:0001890;9.71e-10;41!UBERON:0007023;1.18e-09;114!UBERON:0003528;8.76e-09;34!UBERON:0002020;8.76e-09;34!UBERON:0001893;1.02e-08;34!UBERON:0000073;1.19e-08;53!UBERON:0002616;1.19e-08;53!UBERON:0002791;1.43e-08;32!UBERON:0001869;1.50e-08;32!UBERON:0002619;2.78e-08;22!UBERON:0001950;2.32e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.32e-32,114;UBERON:0001049,7.56e-15,56;UBERON:0005068,7.56e-15,56;UBERON:0006241,7.56e-15,56;UBERON:0007135,7.56e-15,56;UBERON:0000073,2.36e-14,53;UBERON:0002616,2.36e-14,53;UBERON:0002780,3.99e-13,41;UBERON:0001890,3.99e-13,41;UBERON:0003080,3.99e-13,41;UBERON:0006240,3.99e-13,41;UBERON:0000955,9.93e-11,68;UBERON:0006238,9.93e-11,68;UBERON:0003075,1.33e-10,82;UBERON:0007284,1.33e-10,82;UBERON:0001893,2.83e-10,34;UBERON:0003528,2.90e-10,34;UBERON:0002020,2.90e-10,34;UBERON:0002346,3.57e-10,86;UBERON:0002791,1.58e-09,32;UBERON:0001869,1.73e-09,32;UBERON:0001017,4.56e-09,81;UBERON:0010314,1.26e-08,132;UBERON:0001016,1.36e-08,89;UBERON:0002619,2.85e-08,22;UBERON:0003056,1.83e-07,61;UBERON:0001950,2.39e-07,20;UBERON:0011216,4.34e-07,223 | |||
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| ||
|short_description=p1@ETFDH | |||
}} | }} |
Latest revision as of 11:04, 16 September 2015
Short description: | p1@ETFDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ETFDH_5end |
Coexpression cluster: | C1874_left_Hepatocyte_liver_heart_Adipocyte_mature_small |
Association with transcript: | 0bp_to_ENST00000307738, ENST00000436096, ENST00000507475, ENST00000510353_5end |
EntrezGene: | ETFDH |
HGNC: | 3483 |
UniProt: | Q16134D6RAD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.32e-32 | 114 |
neural tube | 7.56e-15 | 56 |
neural rod | 7.56e-15 | 56 |
future spinal cord | 7.56e-15 | 56 |
neural keel | 7.56e-15 | 56 |
regional part of nervous system | 2.36e-14 | 53 |
regional part of brain | 2.36e-14 | 53 |
regional part of forebrain | 3.99e-13 | 41 |
forebrain | 3.99e-13 | 41 |
anterior neural tube | 3.99e-13 | 41 |
future forebrain | 3.99e-13 | 41 |
brain | 9.93e-11 | 68 |
future brain | 9.93e-11 | 68 |
neural plate | 1.33e-10 | 82 |
presumptive neural plate | 1.33e-10 | 82 |
telencephalon | 2.83e-10 | 34 |
brain grey matter | 2.90e-10 | 34 |
gray matter | 2.90e-10 | 34 |
neurectoderm | 3.57e-10 | 86 |
regional part of telencephalon | 1.58e-09 | 32 |
cerebral hemisphere | 1.73e-09 | 32 |
central nervous system | 4.56e-09 | 81 |
structure with developmental contribution from neural crest | 1.26e-08 | 132 |
nervous system | 1.36e-08 | 89 |
regional part of cerebral cortex | 2.85e-08 | 22 |
pre-chordal neural plate | 1.83e-07 | 61 |
neocortex | 2.39e-07 | 20 |
organ system subdivision | 4.34e-07 | 223 |