FFCP PHASE1:Hg19::chr4:23981805..23981809,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:23981805..23981809,-
|short_description=p@chr4:23981805..23981809,-
|description=CAGE_peak_at_chr4:23981805..23981809,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:23981805..23981809,- | |||
|coexpression_cluster_id=C449 | |||
|description=CAGE_peak_at_chr4:23981805..23981809,- | |||
|id=chr4:23981805..23981809,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.96e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;6.18e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.89e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.05e-46!57;UBERON:0005068!6.05e-46!57;UBERON:0006241!6.05e-46!57;UBERON:0007135!6.05e-46!57;UBERON:0002616!1.32e-40!59;UBERON:0002780!8.98e-39!41;UBERON:0001890!8.98e-39!41;UBERON:0006240!8.98e-39!41;UBERON:0003080!9.42e-38!42;UBERON:0001017!3.50e-35!82;UBERON:0002020!5.55e-34!34;UBERON:0003528!5.55e-34!34;UBERON:0000955!2.42e-33!69;UBERON:0006238!2.42e-33!69;UBERON:0005743!2.86e-33!86;UBERON:0001893!3.05e-30!34;UBERON:0000073!1.53e-29!94;UBERON:0001016!1.53e-29!94;UBERON:0001869!1.78e-28!32;UBERON:0003075!1.82e-28!86;UBERON:0007284!1.82e-28!86;UBERON:0002791!1.67e-27!33;UBERON:0002346!6.22e-27!90;UBERON:0007023!8.51e-26!115;UBERON:0003056!1.28e-24!61;UBERON:0002420!7.90e-22!9;UBERON:0007245!7.90e-22!9;UBERON:0010009!7.90e-22!9;UBERON:0010011!7.90e-22!9;UBERON:0000454!7.90e-22!9;UBERON:0002308!2.41e-21!9;UBERON:0000125!2.41e-21!9;UBERON:0002619!8.42e-20!22;UBERON:0001950!6.52e-18!20;UBERON:0000956!2.95e-17!25;UBERON:0000203!2.95e-17!25;UBERON:0000153!1.00e-16!129;UBERON:0007811!1.00e-16!129;UBERON:0000033!2.87e-16!123;UBERON:0009663!1.75e-14!7;UBERON:0000349!6.78e-14!5;UBERON:0004121!1.07e-13!169;UBERON:0000924!3.09e-13!173;UBERON:0006601!3.09e-13!173;UBERON:0001871!4.82e-13!7;UBERON:0006331!7.72e-13!3;UBERON:0000988!1.32e-12!3;UBERON:0002298!1.99e-12!8;UBERON:0000200!1.32e-11!6;UBERON:0000025!3.15e-11!194;UBERON:0001894!4.62e-10!7;UBERON:0006222!4.62e-10!7;UBERON:0000007!7.90e-10!2;UBERON:0001876!1.02e-09!2;UBERON:0000369!1.32e-09!4;UBERON:0002435!1.32e-09!4;UBERON:0000204!1.32e-09!4;UBERON:0010082!1.32e-09!4;UBERON:0003076!2.00e-09!15;UBERON:0003057!2.00e-09!15;UBERON:0002148!4.53e-09!2;UBERON:0009662!4.53e-09!2;UBERON:0004733!2.37e-08!12;UBERON:0002028!2.37e-08!12;UBERON:0007277!2.37e-08!12;UBERON:0004111!8.40e-08!241;UBERON:0004732!1.09e-07!13;UBERON:0002680!1.71e-07!9;UBERON:0001895!1.71e-07!9;UBERON:0010092!1.71e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.23e-66;1!UBERON:0005056;1.23e-66;1!UBERON:0004176;1.23e-66;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.23e-66,1;UBERON:0005056,1.23e-66,1 | |||
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| ||
|short_description=p@chr4:23981805..23981809,- | |||
}} | }} |
Latest revision as of 04:27, 30 July 2015
Short description: | p@chr4:23981805..23981809, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:23981805..23981809, - |
Coexpression cluster: | C449_epidermoid_anaplastic_occipital_oral_middle_Wilms_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.23e-66 | 1 |
external female genitalia | 1.23e-66 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.89e-20 | 14 |