FFCP PHASE1:Hg19::chr4:38062660..38062664,+: Difference between revisions
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|id=chr4:38062660..38062664,+
|short_description=p@chr4:38062660..38062664,+
|description=CAGE_peak_at_chr4:38062660..38062664,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:38062660..38062664,+ | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_at_chr4:38062660..38062664,+ | |||
|id=chr4:38062660..38062664,+ | |||
|ontology_enrichment_celltype=CL:0002536!3.29e-09!2;CL:0000188!5.46e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002577;5.96e-34;3!CL:0000349;5.37e-22;19!CL:0002537;4.21e-21;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.96e-34,3;CL:0000349,5.37e-22,19;CL:0002537,4.21e-21,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;7.14e-26;4!UBERON:0000478;1.03e-17;24!UBERON:0000305;1.65e-15;7!UBERON:0005631;2.73e-11;10!UBERON:0000158;2.73e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.55e-29,14;UBERON:0000158,2.55e-29,14;UBERON:0001987,7.14e-26,4;UBERON:0004340,7.14e-26,4;UBERON:0000478,1.03e-17,24;UBERON:0000305,1.65e-15,7;UBERON:0003124,1.91e-15,7;UBERON:0004871,9.39e-14,8;UBERON:0004923,2.96e-07,66 | |||
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| ||
|short_description=p@chr4:38062660..38062664,+ | |||
}} | }} |
Latest revision as of 04:56, 30 July 2015
Short description: | p@chr4:38062660..38062664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:38062660..38062664, + |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.96e-34 | 3 |
extraembryonic cell | 5.37e-22 | 19 |
amnion mesenchymal stem cell | 4.21e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.55e-29 | 14 |
membranous layer | 2.55e-29 | 14 |
placenta | 7.14e-26 | 4 |
allantois | 7.14e-26 | 4 |
extraembryonic structure | 1.03e-17 | 24 |
amnion | 1.65e-15 | 7 |
chorion | 1.91e-15 | 7 |
somatic layer of lateral plate mesoderm | 9.39e-14 | 8 |
organ component layer | 2.96e-07 | 66 |