FFCP PHASE1:Hg19::chr4:39033963..39034047,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:39033963..39034047,-
|short_description=p1@TMEM156
|description=CAGE_peak_1_at_TMEM156_5end
|association_with_transcript=0bp_to_ENST00000372489,ENST0000038...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80008 | |EntrezGene=80008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26260 | |HGNC=26260 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N614 | |UniProt=Q8N614 | ||
|association_with_transcript=0bp_to_ENST00000372489,ENST00000381938,NM_024943,uc003gto.2,uc010ifj.2_5end | |||
|cluster_id=chr4:39033963..39034047,- | |||
|coexpression_cluster_id=C4409 | |||
|description=CAGE_peak_1_at_TMEM156_5end | |||
|id=chr4:39033963..39034047,- | |||
|ontology_enrichment_celltype=CL:0000542!1.87e-25!53;CL:0000051!1.87e-25!53;CL:0000838!4.85e-25!52;CL:0000037!5.35e-21!172;CL:0000566!5.35e-21!172;CL:0000988!2.39e-20!182;CL:0002032!5.28e-19!165;CL:0000837!5.28e-19!165;CL:0000945!1.79e-15!24;CL:0000826!1.79e-15!24;CL:0002087!8.02e-15!119;CL:0000738!1.64e-14!140;CL:0002031!3.16e-12!124;CL:0000084!7.23e-10!25;CL:0000827!7.23e-10!25;CL:0000236!9.64e-10!14;CL:0000791!1.41e-09!18;CL:0000789!1.41e-09!18;CL:0002420!1.41e-09!18;CL:0002419!1.41e-09!18;CL:0000790!1.41e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.53e-17;24!CL:0000542;1.02e-16;53!CL:0000084;1.04e-10;25!CL:0000791;1.12e-10;18!CL:0000789;1.12e-10;18!CL:0002419;1.12e-10;18!CL:0000236;1.54e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.69e-28,53;CL:0000051,1.69e-28,53;CL:0000838,5.01e-28,52;CL:0000037,2.42e-18,168;CL:0000988,1.76e-17,177;CL:0000945,2.07e-17,24;CL:0000826,2.07e-17,24;CL:0002032,3.73e-16,161;CL:0000837,3.73e-16,161;CL:0002087,2.72e-12,115;CL:0000738,8.23e-12,136;CL:0000236,7.00e-11,14;CL:0000084,8.94e-11,25;CL:0000827,8.94e-11,25;CL:0000791,1.08e-10,18;CL:0000789,1.08e-10,18;CL:0002420,1.08e-10,18;CL:0002419,1.08e-10,18;CL:0000790,1.08e-10,18;CL:0002031,8.64e-10,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.02e-16;53!CL:0000790;1.12e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!4.79e-10!51;DOID:0060083!4.79e-10!51;DOID:1240!4.38e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;7.30e-07;51!DOID:0060083;7.30e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.35e-10,51;DOID:0060083,6.35e-10,51;DOID:1240,5.18e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,8.10921990454979,4.18680700783456,0,0,0.74259811776028,0.331397375727916,4.03395087871065,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.627713197974014,36.3727811360248,38.8335788098243,48.5645520705401,5.50709987588466,9.59573495243032,4.18003532953405,2.75826367343678,0.30120591877825,3.69754010166788,49.1142051679112,23.8844310578868,18.2032272387605,11.0799081706375,1.80490002723128,1.73608696572681,0.895661896959697,5.18229865630367,1.03030227053675,0.726991193897824,1.13362783106643,1.69808842831471,0.464858073811369,0.822335776043652,1.23882548358041,0.575384784644301,0.768482119587302,1.89185783910868,0.344745680736619,0,2.70852973188684,0.188242339542605,0.545812300115692,2.47195832889593,0,2.24650318953266,1.27867425159808,0.989553900560148,0.199463657621632,1.70489900213078,0,1.70215567407342,0,0.251248665256743,0,3.25783267057675,1.21079900526674,1.84138817993782,1.58231193720442,0.422510572623884,1.06302149982522,1.67726916406701,0.786300418025466,0.600707571366025,0.48217676009124,0,0.19891667719909,0.182664153764634,91.5180471198878,128.342573646601,104.962091955899,99.8548720805627,84.8839492516346,109.777716031306,107.089269391148,99.2215904716779,115.550232729218,159.141278319524,99.3910393125595,17.1822727152734,10.0891541336676,9.48182705190277,14.5565229884236,12.5763444079733,21.793758893948,23.5732958500856,19.2294137313818,24.1458380924714,1.94826728407911,39.2164808235811,21.5062312456631,17.7227115666897,15.9774279621359,18.4451500404972,14.956824969386,17.4304178879897,15.7519510137934,32.4579456023259,18.5358203952576,17.9252354820108,5.22677619024884,29.8003571294599,48.2857821938421,42.6098032398461,25.5549888939698,11.7869203299916,9.76625180784628,12.3558765778289,11.5942841689885,17.2781925058465,21.2382235138988,20.5996209278295,15.6014319414999,25.2008429030916,5.61624411145365,6.51709817472595,0,7.37770945674,1.2786256184353,0,0,0,0,0,0,0,1.31752178539689,0.785874452986276,0.364295288292542,0.370784442784429,0,0,0.132957960518865,22.1796280603968,15.4438625910635,19.6872475704669,0.39752481473341,1.72046919021225,1.04142150482278,0.56530794192401,2.09749718104953,1.37559020970034,0.417989933073621,0.516833518338658,1.42306505074684,0,0.402829317109147,1.52054421143703,0,1.47065232138347,0.81014194788176,4.10778750106767,0.898117490504679,1.46394924628319,0,1.89853131913626,0.916008719652036,2.63560834872127,0,3.05265836499774,0,0.12663051166458,0,0.286836620748814,1.06400514659507,0.560677600142307,0,1.72667283892012,0.933633106199299,8.89090435659941,8.3365570587864,2.57307626996383,8.64263886719998,0.234321431833797,0.312160076830321,1.1409436430889,0.149448680551801,0.587172493218824,0,0.280901613404497,2.65400422631361,0.61417158655884,0.206651562351531,0,0,0,1.43723628363248,0.336672227908132,0.500474079487857,2.49357703935765,0,0,0,5.89847352432109,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,2.12586938479627,1.63647672354501,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.330881918197182,0.435758888184812,0,0.269662616320329,0.196221465125346,0,2.95262181849859,2.80483547606892,0.4115740113314,0,0,0,2.36315962672562,0,0.983907508344908,9.77936518701596,0,1.1240175325762,0.100528972411631,4.72201070308501,0.651616610620649,2.07986957055916,8.6598805215164,0.115930404975077,4.81375646366869,0.433099343283221,0,0,0,0,0.246217006087397,1.63802985597466,0.743155811443641,3.74935335947108,0.335964256397719,0.567100388969546,0.806026704325635,0.581267877027924,0,0.492663237895943,0.088048434013226,0.207328115540772,0,0,0.190493682876507,0,0,0,0,0,0,8.52196241024741,3.92364061949952,27.5751954686772,0.646358578788889,0,0,0.531876233169741,0,1.54324424557285,4.25547396069835,0.799266537048298,15.8705572960544,0.542621605391443,1.64648067356154,0.977208552881205,9.24019066730619,2.37585561880029,2.41151501647669,0.871533458600294,0.499864955910285,1.2162378064119,0.502257091432126,4.21667878966063,17.0133647399024,3.44585807502342,0,0.723906533337896,1.02738161275192,0,13.8985578551974,32.7071061935199,9.48761329381876,8.34229735818364,0.254094624222463,0,0,0.167516265334349,0,2.99602809578873,8.97484377612075,2.90090859405225,0.736148950314839,3.00102312635806,1.62759014219841,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.979005787313703,1.37257369524342,21.5038747167803,30.6314165162436,10.0323904335238,0,0,0,0,0,0,0.128139149255701,0,0,0,0.925258162815933,0.355123450626254,1.8067974323038,14.5391240171414,1.27831416305955,0.241718899183244,14.8374788024431,1.74953878978203,2.29628896329214,2.00300284807389,0.393373244878272,1.35359883872224,1.5403067420883,1.56869953835371,1.46139224653261,1.47772280450026,0,3.40187410553031,22.0234234424182,3.08454505380579,5.1479823133332,0.501689773854853,0,0.831076008928724,0.671624264166535,1.09629938322967,2.0914836081992,0,0.328014645699706,2.27764876265012,1.03041011647722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| ||
|short_description=p1@TMEM156 | |||
}} | }} |
Latest revision as of 16:31, 17 September 2015
Short description: | p1@TMEM156 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM156_5end |
Coexpression cluster: | C4409_bronchioalveolar_CD19_large_malignant_prostate_gall_meningioma |
Association with transcript: | 0bp_to_ENST00000372489, ENST00000381938, NM_024943, uc003gto.2, uc010ifj.2_5end |
EntrezGene: | TMEM156 |
HGNC: | 26260 |
UniProt: | Q8N614 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.69e-28 | 53 |
common lymphoid progenitor | 1.69e-28 | 53 |
lymphoid lineage restricted progenitor cell | 5.01e-28 | 52 |
hematopoietic stem cell | 2.42e-18 | 168 |
hematopoietic cell | 1.76e-17 | 177 |
lymphocyte of B lineage | 2.07e-17 | 24 |
pro-B cell | 2.07e-17 | 24 |
hematopoietic oligopotent progenitor cell | 3.73e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.73e-16 | 161 |
nongranular leukocyte | 2.72e-12 | 115 |
leukocyte | 8.23e-12 | 136 |
B cell | 7.00e-11 | 14 |
T cell | 8.94e-11 | 25 |
pro-T cell | 8.94e-11 | 25 |
mature alpha-beta T cell | 1.08e-10 | 18 |
alpha-beta T cell | 1.08e-10 | 18 |
immature T cell | 1.08e-10 | 18 |
mature T cell | 1.08e-10 | 18 |
immature alpha-beta T cell | 1.08e-10 | 18 |
hematopoietic lineage restricted progenitor cell | 8.64e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.35e-10 | 51 |
immune system cancer | 6.35e-10 | 51 |
leukemia | 5.18e-08 | 39 |