FFCP PHASE1:Hg19::chr5:1043105..1043109,+: Difference between revisions
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|id=chr5:1043105..1043109,+
|short_description=p@chr5:1043105..1043109,+
|description=CAGE_peak_at_chr5:1043105..1043109,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:1043105..1043109,+ | |||
|coexpression_cluster_id=C1947 | |||
|description=CAGE_peak_at_chr5:1043105..1043109,+ | |||
|id=chr5:1043105..1043109,+ | |||
|ontology_enrichment_celltype=CL:0000214!2.84e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:1000487;3.52e-50;2!CL:0000214;5.04e-34;3!CL:0000153;2.31e-12;9!CL:0000447;2.31e-12;9!CL:0000327;5.74e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,4.52e-50,2;CL:0000214,4.27e-34,3;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!4.08e-07!1;DOID:1357!4.08e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!4.26e-10!32;UBERON:0000200!1.59e-09!6;UBERON:0001893!1.87e-09!34;UBERON:0006915!2.84e-09!3;UBERON:0002018!2.84e-09!3;UBERON:0002217!2.84e-09!3;UBERON:0007616!2.84e-09!3;UBERON:0002771!3.47e-09!3;UBERON:0002619!1.24e-08!22;UBERON:0001049!3.42e-08!57;UBERON:0005068!3.42e-08!57;UBERON:0006241!3.42e-08!57;UBERON:0007135!3.42e-08!57;UBERON:0002616!7.29e-08!59;UBERON:0002780!1.09e-07!41;UBERON:0001890!1.09e-07!41;UBERON:0006240!1.09e-07!41;UBERON:0002171!1.20e-07!1;UBERON:0006518!1.20e-07!1;UBERON:0008949!1.20e-07!1;UBERON:0000101!1.20e-07!1;UBERON:0002167!1.20e-07!1;UBERON:0000956!1.42e-07!25;UBERON:0000203!1.42e-07!25;UBERON:0002791!1.44e-07!33;UBERON:0003080!1.75e-07!42;UBERON:0002020!2.50e-07!34;UBERON:0003528!2.50e-07!34;UBERON:0001871!2.85e-07!7;UBERON:0003112!3.62e-07!1;UBERON:0000032!3.62e-07!1;UBERON:0005253!3.62e-07!1;UBERON:0003128!3.62e-07!1;UBERON:0002241!3.62e-07!1;UBERON:0001703!3.62e-07!1;UBERON:0004761!3.62e-07!1;UBERON:0009617!3.62e-07!1;UBERON:0001874!3.85e-07!1;UBERON:0001764!4.08e-07!1;UBERON:0001825!4.08e-07!1;UBERON:0007023!4.62e-07!115;UBERON:0007190!6.57e-07!1;UBERON:0001950!8.24e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;5.04e-34;3!UBERON:0007616;5.04e-34;3!UBERON:0002217;5.04e-34;3!UBERON:0002018;5.04e-34;3!UBERON:0004905;1.00e-13;8!UBERON:0000982;1.00e-13;8!UBERON:0004770;1.00e-13;8!UBERON:0004457;2.31e-12;9!UBERON:0000042;2.31e-12;9!UBERON:0002367;2.27e-10;11!UBERON:0010147;2.27e-10;11!UBERON:0000486;1.27e-09;12!UBERON:0003937;1.27e-09;12!UBERON:0005399;1.27e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.27e-34,3;UBERON:0007616,4.27e-34,3;UBERON:0002217,4.27e-34,3;UBERON:0002018,4.27e-34,3;UBERON:0004905,9.39e-14,8;UBERON:0000982,9.39e-14,8;UBERON:0004770,9.39e-14,8;UBERON:0002367,2.37e-10,11;UBERON:0010147,2.37e-10,11;UBERON:0009846,2.37e-10,11;UBERON:0003353,2.37e-10,11;UBERON:0004902,2.37e-10,11;UBERON:0003820,2.37e-10,11;UBERON:0009847,2.37e-10,11;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12;UBERON:0003937,1.33e-09,12;UBERON:0005399,1.33e-09,12;UBERON:0000162,2.00e-08,14;UBERON:0001353,2.00e-08,14;UBERON:0000163,2.00e-08,14;UBERON:0006866,2.00e-08,14;UBERON:0000164,2.00e-08,14;UBERON:0000931,2.00e-08,14;UBERON:0004122,5.93e-08,15 | |||
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|short_description=p@chr5:1043105..1043109,+ | |||
}} | }} |
Latest revision as of 08:26, 30 July 2015
Short description: | p@chr5:1043105..1043109, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:1043105..1043109, + |
Coexpression cluster: | C1947_Smooth_synovial_small_gastric_parietal_Cardiac_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 4.52e-50 | 2 |
synovial cell | 4.27e-34 | 3 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.27e-34 | 3 |
layer of synovial tissue | 4.27e-34 | 3 |
synovial joint | 4.27e-34 | 3 |
synovial membrane of synovial joint | 4.27e-34 | 3 |
articulation | 9.39e-14 | 8 |
skeletal joint | 9.39e-14 | 8 |
articular system | 9.39e-14 | 8 |
prostate gland | 2.37e-10 | 11 |
male accessory sex gland | 2.37e-10 | 11 |
embryonic cloacal epithelium | 2.37e-10 | 11 |
epithelium of hindgut | 2.37e-10 | 11 |
urogenital sinus epithelium | 2.37e-10 | 11 |
prostate bud | 2.37e-10 | 11 |
prostate field | 2.37e-10 | 11 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |
sex gland | 1.33e-09 | 12 |
male reproductive gland | 1.33e-09 | 12 |
cloaca | 2.00e-08 | 14 |
anal region | 2.00e-08 | 14 |
embryonic cloaca | 2.00e-08 | 14 |
terminal part of digestive tract | 2.00e-08 | 14 |
primitive urogenital sinus | 2.00e-08 | 14 |
proctodeum | 2.00e-08 | 14 |
genitourinary system | 5.93e-08 | 15 |