FFCP PHASE1:Hg19::chr5:131892713..131892734,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:131892713..131892734,+
|short_description=p3@RAD50
|description=CAGE_peak_3_at_RAD50_5end
|association_with_transcript=83bp_to_ENST00000265335,ENST00000533...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10111 | |EntrezGene=10111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9816 | |HGNC=9816 | ||
|TSSclassifier=strong | |||
|UniProt=Q92878,E9PM98 | |UniProt=Q92878,E9PM98 | ||
|association_with_transcript=83bp_to_ENST00000265335,ENST00000533482,uc003kxh.2,uc003kxi.2_5end | |||
|cluster_id=chr5:131892713..131892734,+ | |||
|description=CAGE_peak_3_at_RAD50_5end | |||
|id=chr5:131892713..131892734,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.65e-16!239;DOID:162!1.30e-15!235;DOID:0050686!2.72e-09!137;DOID:0050687!4.06e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.02e-12,239;DOID:162,8.76e-12,235;DOID:0050686,2.42e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@RAD50 | |||
}} | }} |
Latest revision as of 05:37, 20 September 2015
Short description: | p3@RAD50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAD50_5end |
Coexpression cluster: | NA |
Association with transcript: | 83bp_to_ENST00000265335, ENST00000533482, uc003kxh.2, uc003kxi.2_5end |
EntrezGene: | RAD50 |
HGNC: | 9816 |
UniProt: | Q92878E9PM98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.02e-12 | 239 |
cancer | 8.76e-12 | 235 |
organ system cancer | 2.42e-07 | 137 |