FFCP PHASE1:Hg19::chr5:151051399..151051408,-: Difference between revisions
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|id=chr5:151051399..151051408,-
|short_description=p22@SPARC
|description=CAGE_peak_22_at_SPARC_5end
|association_with_transcript=-9bp_to_ENST00000524277_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6678 | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11219 | |HGNC=11219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000524277_5end | |||
|cluster_id=chr5:151051399..151051408,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_22_at_SPARC_5end | |||
|id=chr5:151051399..151051408,- | |||
|ontology_enrichment_celltype=CL:0002262!4.38e-08!2;CL:1000398!4.38e-08!2;CL:0002589!6.58e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.66e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!3.60e-28!2;UBERON:0002757!3.60e-28!2;UBERON:0010134!3.60e-28!2;UBERON:0002784!3.60e-28!2;UBERON:0005408!3.60e-28!2;UBERON:0001899!3.60e-28!2;UBERON:0003296!1.32e-14!4;UBERON:0010133!1.32e-14!4;UBERON:0000966!1.03e-11!5;UBERON:0005388!1.03e-11!5;UBERON:0001802!1.03e-11!5;UBERON:0000970!6.40e-11!20;UBERON:0002104!2.06e-10!21;UBERON:0000020!1.58e-09!23;UBERON:0001032!3.86e-09!24;UBERON:0004456!3.86e-09!24;UBERON:0001894!9.70e-09!7;UBERON:0006222!9.70e-09!7;UBERON:0001529!6.58e-08!2;UBERON:0007204!6.58e-08!2;UBERON:0003056!1.97e-07!61;UBERON:0005743!7.08e-07!86;UBERON:0000019!7.19e-07!19;UBERON:0000047!7.19e-07!19;UBERON:0004088!7.19e-07!19;UBERON:0003072!7.19e-07!19;UBERON:0003071!7.19e-07!19;UBERON:0004128!7.19e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.43e-131;2!UBERON:0002757;6.43e-131;2!UBERON:0010134;6.43e-131;2!UBERON:0005408;6.43e-131;2!UBERON:0001899;6.43e-131;2!UBERON:0003296;2.83e-66;4!UBERON:0010133;2.83e-66;4!UBERON:0002784;2.83e-66;4!UBERON:0001894;1.64e-38;7!UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5!UBERON:0000949;5.48e-08;43!UBERON:0002368;5.52e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.99e-131,2;UBERON:0002757,8.99e-131,2;UBERON:0010134,8.99e-131,2;UBERON:0005408,8.99e-131,2;UBERON:0001899,8.99e-131,2;UBERON:0003296,3.35e-66,4;UBERON:0010133,3.35e-66,4;UBERON:0002784,3.35e-66,4;UBERON:0001894,1.80e-38,7;UBERON:0006222,1.80e-38,7;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0003056,1.22e-10,61;UBERON:0002368,1.14e-08,35;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41;UBERON:0000949,5.58e-07,45 | |||
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|short_description=p22@SPARC | |||
}} | }} |
Latest revision as of 10:23, 16 September 2015
Short description: | p22@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SPARC_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -9bp_to_ENST00000524277_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 8.99e-131 | 2 |
regional part of epithalamus | 8.99e-131 | 2 |
secretory circumventricular organ | 8.99e-131 | 2 |
circumventricular organ | 8.99e-131 | 2 |
epithalamus | 8.99e-131 | 2 |
gland of diencephalon | 3.35e-66 | 4 |
neuroendocrine gland | 3.35e-66 | 4 |
regional part of diencephalon | 3.35e-66 | 4 |
diencephalon | 1.80e-38 | 7 |
future diencephalon | 1.80e-38 | 7 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
pre-chordal neural plate | 1.22e-10 | 61 |
endocrine gland | 1.14e-08 | 35 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |
endocrine system | 5.58e-07 | 45 |