FFCP PHASE1:Hg19::chr5:158526756..158526797,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:158526756..158526797,-
|short_description=p3@EBF1
|description=CAGE_peak_3_at_EBF1_5end
|association_with_transcript=0bp_to_ENST00000313708,ENST00000318060...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1879 | |EntrezGene=1879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3126 | |HGNC=3126 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UH73,E5RFQ1 | |UniProt=Q9UH73,E5RFQ1 | ||
|association_with_transcript=0bp_to_ENST00000313708,ENST00000318060,ENST00000517373,ENST00000518836,NM_024007,uc003lxl.3,uc010jip.2,uc011ddx.1_5end | |||
|cluster_id=chr5:158526756..158526797,- | |||
|coexpression_cluster_id=C857 | |||
|description=CAGE_peak_3_at_EBF1_5end | |||
|id=chr5:158526756..158526797,- | |||
|ontology_enrichment_celltype=CL:0000945!3.05e-20!24;CL:0000826!3.05e-20!24;CL:0000236!5.72e-13!14;CL:0000542!7.36e-08!53;CL:0000051!7.36e-08!53;CL:0000838!2.21e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.33e-35;24!CL:0000236;4.01e-21;13!CL:0000542;7.22e-11;53!CL:0000136;2.43e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.05e-35,24;CL:0000826,1.05e-35,24;CL:0000236,2.24e-22,14;CL:0000542,4.16e-16,53;CL:0000051,4.16e-16,53;CL:0000838,3.68e-15,52;CL:0000136,2.14e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000051;7.22e-11;53!UBERON:0004872;6.99e-10;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.51e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.66e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-19!115;UBERON:0000479!7.89e-08!787;UBERON:0000178!7.92e-08!15;UBERON:0000179!7.92e-08!15;UBERON:0000463!7.92e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;2.08e-11;32!UBERON:0000178;2.03e-10;15!UBERON:0000179;2.03e-10;15!UBERON:0000463;2.03e-10;15!UBERON:0002193;9.65e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.80e-11,114;UBERON:0000178,2.02e-10,15;UBERON:0000179,2.02e-10,15;UBERON:0000463,2.02e-10,15;UBERON:0004457,7.90e-08,12;UBERON:0000042,7.90e-08,12 | |||
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| 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| ||
|short_description=p3@EBF1 | |||
}} | }} |
Latest revision as of 15:12, 16 September 2015
Short description: | p3@EBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EBF1_5end |
Coexpression cluster: | C857_non_lymphoma_CD19_acute_diffuse_Burkitt_B |
Association with transcript: | 0bp_to_ENST00000313708, ENST00000318060, ENST00000517373, ENST00000518836, NM_024007, uc003lxl.3, uc010jip.2, uc011ddx.1_5end |
EntrezGene: | EBF1 |
HGNC: | 3126 |
UniProt: | Q9UH73E5RFQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.05e-35 | 24 |
pro-B cell | 1.05e-35 | 24 |
B cell | 2.24e-22 | 14 |
lymphocyte | 4.16e-16 | 53 |
common lymphoid progenitor | 4.16e-16 | 53 |
lymphoid lineage restricted progenitor cell | 3.68e-15 | 52 |
fat cell | 2.14e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.80e-11 | 114 |
blood | 2.02e-10 | 15 |
haemolymphatic fluid | 2.02e-10 | 15 |
organism substance | 2.02e-10 | 15 |
cavity lining | 7.90e-08 | 12 |
serous membrane | 7.90e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.66e-07 | 10 |