FFCP PHASE1:Hg19::chr5:3595934..3595957,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:3595934..3595957,+
|short_description=p2@IRX1
|description=CAGE_peak_2_at_IRX1_5end
|association_with_transcript=-210bp_to_ENST00000302006,NM_024337,uc003j...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79192 | |EntrezGene=79192 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14358 | |HGNC=14358 | ||
|TSSclassifier=strong | |||
|UniProt=P78414 | |UniProt=P78414 | ||
|association_with_transcript=-210bp_to_ENST00000302006,NM_024337,uc003jde.2_5end | |||
|cluster_id=chr5:3595934..3595957,+ | |||
|coexpression_cluster_id=C4498 | |||
|description=CAGE_peak_2_at_IRX1_5end | |||
|id=chr5:3595934..3595957,+ | |||
|ontology_enrichment_celltype=CL:0002620!3.52e-11!23;CL:0000057!2.86e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.09e-14;23!CL:0000622;6.87e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.83e-14,23;CL:0000622,7.18e-08,5;CL:0000136,7.63e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.85e-17!45;UBERON:0002416!1.85e-17!45;UBERON:0003102!1.31e-15!95;UBERON:0002097!1.15e-14!40;UBERON:0000475!3.75e-11!365;UBERON:0004121!1.64e-10!169;UBERON:0003076!7.70e-10!15;UBERON:0003057!7.70e-10!15;UBERON:0000924!1.02e-09!173;UBERON:0006601!1.02e-09!173;UBERON:0004732!3.85e-09!13;UBERON:0004733!9.72e-09!12;UBERON:0002028!9.72e-09!12;UBERON:0007277!9.72e-09!12;UBERON:0000064!6.60e-08!219;UBERON:0002680!2.55e-07!9;UBERON:0001895!2.55e-07!9;UBERON:0010092!2.55e-07!9;UBERON:0000153!8.87e-07!129;UBERON:0007811!8.87e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;8.24e-16;46!UBERON:0002416;8.24e-16;46!UBERON:0002097;1.36e-14;41!UBERON:0003102;4.24e-14;50!UBERON:0004732;5.26e-12;13!UBERON:0004733;1.91e-11;12!UBERON:0002028;1.91e-11;12!UBERON:0002680;1.47e-09;9!UBERON:0001895;1.47e-09;9!UBERON:0001044;9.34e-09;6!UBERON:0003293;9.34e-09;6!UBERON:0003294;9.34e-09;6!UBERON:0010047;9.34e-09;6!UBERON:0003408;9.34e-09;6!UBERON:0000167;9.34e-09;6!UBERON:0002067;2.62e-07;9!UBERON:0002037;3.55e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.39e-22,46;UBERON:0002416,1.39e-22,46;UBERON:0003102,2.88e-19,99;UBERON:0002097,1.09e-18,41;UBERON:0004732,2.52e-12,13;UBERON:0003076,8.48e-12,15;UBERON:0003057,8.48e-12,15;UBERON:0004733,9.38e-12,12;UBERON:0002028,9.38e-12,12;UBERON:0007277,9.38e-12,12;UBERON:0002680,9.57e-10,9;UBERON:0001895,9.57e-10,9;UBERON:0010092,9.57e-10,9;UBERON:0001044,9.89e-09,6;UBERON:0003293,9.89e-09,6;UBERON:0003294,9.89e-09,6;UBERON:0010047,9.89e-09,6;UBERON:0000167,9.89e-09,6;UBERON:0002067,2.18e-07,9;UBERON:0004016,2.18e-07,9;UBERON:0010083,2.18e-07,9;UBERON:0002037,2.51e-07,6;UBERON:0006215,2.51e-07,6;UBERON:0005631,8.40e-07,14;UBERON:0000158,8.40e-07,14 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0,2.00146596706261,0,0,2.53299878168311,1.89515962028049,7.83556884599516,0.491467873003018,6.97801167972428,8.08233076881637,13.1883489114227,0.123766352960047,0,0,0,0,0,8.125989833068,14.8920504608305,31.6589268692869,0.572471974262113,0.684372125364421,0.125542639594803,0,0,0,0,0,0.77408061658038,2.75826367343678,4.2168828628955,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0,2.75056058545197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72188104285069,0,0.759783069987479,0.529636723252875,0.286836620748814,0.354668382198357,2.80338800071154,0,1.97334038733728,0,0.134710672069688,0,0,0,0.70296429550139,1.24864030732128,0.570471821544449,4.63290909710583,2.46612447151906,3.72307772046703,3.93262258766296,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,2.85452311922534,0.113432183160021,2.69084453533293,4.27114777637135,2.11931901159562,6.90209520994125,4.225153698776,1.54584324027377,2.23340227597908,2.02531598689519,2.04617710838517,3.5340728394176,5.43094401989566,2.90962902273861,1.77504796258307,1.10827308050404,1.01736355386293,4.25173876959253,1.36373060295417,5.16248271700207,2.31750041646231,3.31324420803713,3.02104251460748,4.25010325563019,4.54177531576131,0.36497735907583,3.12899064659632,3.85944562915731,2.76269842704961,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,4.7192622725709,1.1240175325762,2.21163739305588,3.24059558054854,2.93227474779292,15.5990217791937,0,0,0,0,0,0,0,0,0,0,0,5.62403003920662,2.18376766658517,2.41017665312057,7.88114999785065,8.13775027839093,28.3703182582256,0,0,0.621984346622316,0.864719720501769,0.37872730027914,1.0159663086747,0.763976851116555,1.17217447210047,3.4214489204541,1.33675740514321,0,0.285826432630578,0,0,0,0,0,1.690605505112,0,0,0,5.67396528093113,0,0,0,0,1.62868092146868,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.831883446123229,0,0,0,0,0,0,0,1.10621501125022,0,0,0.343143423810856,0,0,0,12.7313580007429,21.6366071363646,36.2868351995616,0.992431231275107,0.306923946576125,0.561320188866147,0,3.07024349440022,0,0,1.54209693802656,3.19611105563629,0.98552587216571,0,3.37010097533882,0,0,0.0920809889358963,0,0,0,2.70719767744447,0.770153371044148,11.7652465376528,7.30696123266303,1.89992932007176,0,0.170093705276516,0,0,0.270946437543853,2.50844886927427,2.54876273045038,0,2.68649705666614,0,0,0,0,0,0.103041011647722,10.4389189892911,7.09581699317057,8.03971753194641,8.45078319847478,0,0,0,0.15350367472613,0,0,0,0,0,0.661139661443912,1.15314040419064,0.893288987462089,1.31505115112215,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.42793898803392,1.27281299170375,0.78494864019923,0,0,0.117812402345686,0,0,0,0,2.68084838594413,0,0.136499911407986,0,0,1.10273068709225,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,1.31717957183961,7.5894634753143,13.6474540895543,1.63577591633371,5.3624182042863,3.26672954583968,1.12972560932135,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,10.2431141213276,0,0,0,0,0,0,1.96558024679421,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69262196843137,3.2454681417118,0,57.8046720860183,0,2.3441308683503,0,0,0,9.78852387424529,16.6300221266278,4.91457123358771,0,1.1253553312841,0,0,0.211125408127993,4.38345574152353,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,23.1999864139134,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,1.54810963903714,2.95547618953547,0,0,0,0,0,0,0,0,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.337005664903385,1.60515529459758,0.702793337176017,0,0,0,3.94584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0.881931576729399,0,2.09672001890436,0,0,0,0,0.775912131907355,0,2.93774963014692,1.78154502040776,0,0.0633107959558787,0,0,0,0,0,0,0,0,3.10631338913581,0,1.22313785466253,0.732219924186332,11.8317932458133,0,0.600420288709789,0.410716136675979,0,0,0,0,0.458320848023367,0.717873024576814,0.798716001995964,0.429226048136571,0,0.739018197353989,0,0,0,0,0,0,0,0,0.953423842781029,0,0.137539436597234,0,0,0,0.0607495566580247,16.1008650047648,7.64415360802222,15.4216489116894,0,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0,0,0,2.58565912723101,1.45455861916959,0,0,0.533937062838473,0.78602152549833,0.414239055347196,0.496166021811951,0,0,2.55336503108073,3.80812462358632,0.2506898940227,3.982492497925,3.60659893780785,0,0,0,0,1.72022758707021,2.44043913381075,1.80079568530012,0,0,0,0,0,0,0.724605143054126,1.34329322598187,1.8697064787778,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,2.74716564146234,3.03074539889327,1.26184898228651,0.57785949122191,0.857766365499703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| ||
|short_description=p2@IRX1 | |||
}} | }} |
Latest revision as of 18:45, 17 September 2015
Short description: | p2@IRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IRX1_5end |
Coexpression cluster: | C4498_acute_Placental_salivary_Astrocyte_Mammary_breast_Trabecular |
Association with transcript: | -210bp_to_ENST00000302006, NM_024337, uc003jde.2_5end |
EntrezGene: | IRX1 |
HGNC: | 14358 |
UniProt: | P78414 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.83e-14 | 23 |
acinar cell | 7.18e-08 | 5 |
fat cell | 7.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
integument | 1.39e-22 | 46 |
integumental system | 1.39e-22 | 46 |
surface structure | 2.88e-19 | 99 |
skin of body | 1.09e-18 | 41 |
segmental subdivision of nervous system | 2.52e-12 | 13 |
posterior neural tube | 8.48e-12 | 15 |
chordal neural plate | 8.48e-12 | 15 |
segmental subdivision of hindbrain | 9.38e-12 | 12 |
hindbrain | 9.38e-12 | 12 |
presumptive hindbrain | 9.38e-12 | 12 |
regional part of metencephalon | 9.57e-10 | 9 |
metencephalon | 9.57e-10 | 9 |
future metencephalon | 9.57e-10 | 9 |
saliva-secreting gland | 9.89e-09 | 6 |
gland of oral region | 9.89e-09 | 6 |
gland of foregut | 9.89e-09 | 6 |
oral gland | 9.89e-09 | 6 |
oral cavity | 9.89e-09 | 6 |
dermis | 2.18e-07 | 9 |
dermatome | 2.18e-07 | 9 |
future dermis | 2.18e-07 | 9 |
cerebellum | 2.51e-07 | 6 |
rhombic lip | 2.51e-07 | 6 |
extraembryonic membrane | 8.40e-07 | 14 |
membranous layer | 8.40e-07 | 14 |